BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496014 Length=1572 Score E Sequences producing significant alignments: (Bits) Value AT5G58910.1 | Symbols: LAC16 | laccase 16 | chr5:23789522-23791... 2510 0.0 > AT5G58910.1 | Symbols: LAC16 | laccase 16 | chr5:23789522-23791681 REVERSE LENGTH=1572 Length=1572 Score = 2510 bits (1359), Expect = 0.0 Identities = 1502/1573 (95%), Gaps = 2/1573 (0%) Strand=Plus/Plus Query 1 ATGACGAACACCACGAAGCTGTGCTCGTCGAAGCCCATCGTCACCGTCAATGGA-AAGTT 59 ||||||||||||||||||||||||||||||||||| || ||||||||||||||| || || Sbjct 1 ATGACGAACACCACGAAGCTGTGCTCGTCGAAGCCTATAGTCACCGTCAATGGACAA-TT 59 Query 60 TCCGGGCCCCACCATTGTTGCAAGAGAAGACGACACTCTTTTGATCAAAGTTGTGAATCA 119 |||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct 60 TCCGGGACCCACCATTGTTGCAAGAGAAGGCGACACTATTTTGATCAAAGTTGTGAATCA 119 Query 120 CGTGAACTACAACGTCTCCATCCACTGGACAGGTTGGGCAGATGGACCGGCTTACATAAC 179 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 CGTGAAGTACAACGTCTCCATCCACTGGACAGGTTGGGCAGATGGACCGGCTTACATAAC 179 Query 180 ACAATGTCCTATCCAACCGGGACAGAATTATCTCCACAATTTTACATTGACGGGTCAACG 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 ACAATGTCCTATCCAACCGGGACAGAATTATCTCCACAATTTTACATTGACGGGTCAACG 239 Query 240 AGGAACCCTATGGTGGCATGCTCACATCTTGTGGCTTCGTGCCACGGTGCACGGCGCCAT 299 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 240 AGGAACCCTATGGTGGCATGCTCACATCTTGTGGCTTCGTGCTACGGTGCACGGCGCCAT 299 Query 300 TGTCATCTTGCCTAAGCTCGGTGTCCCATACCCTTTCCCTAAGCCCTACAAAGAGAAAAC 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 TGTCATCTTGCCTAAGCTCGGTGTCCCATACCCTTTCCCTAAGCCCTACAAAGAGAAAAC 359 Query 360 AATTGTTCTTAGTGAATGGTGGAAATCGGACGTGGAAGAACTTATAAACGAGGCTTCAAA 419 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 360 CATTGTCCTTAGTGAATGGTGGAAATCGGACGTGGAAGAACTCATAAACGAGGCTTCAAG 419 Query 420 AATTGGAACAGCTCCTAGCGCTTCTGATGCACATACCATCAATGGTCATTCAGGCTCCAT 479 ||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 420 AATAGGAACAGCTCCTAGTGCTTCGGATGCACATACCATCAATGGTCATTCAGGCTCCAT 479 Query 480 CTCTAATTGTCCTTCCCAAAGTAGTTACGGTTTACCGGTGAGAGCAGGAAAGACGTACAT 539 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 480 CTCTAATTGTCCTTCCCAAAGTAGTTACGGTTTACCAGTGAGAGCAGGAAAGACATACAT 539 Query 540 GTTACGGATCATCAACGCGGCATTAAACGAAGAGCTCTTCTTTAAAATTGCTGGTCACGT 599 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 540 GTTAAGGATCATCAACGCGGCGTTAAACGAAGAGCTCTTCTTTAAAATTGCTGGTCACGT 599 Query 600 ACTAACCGTTGTAGAAGTTGATGCTGTTTACACCAAACCGTATAAAACTGACACAGTATT 659 | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 ATTAACCGTTGTGGAAGTTGATGCTGTTTACACCAAACCGTATAAAACTGACACAGTATT 659 Query 660 CATCGCCCCGGGACAGACTACTAACGTTCTCTTAACAGCAAACGCAAACGCTGGTTCCAA 719 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 660 CATAGCCCCGGGACAGACTACTAACGTTCTCTTAACAGCAAACGCAAACGCTGGTTCAAA 719 Query 720 TTACATGGTCGCCGCCACAACATTTACGGACGCTCAAATCCCATACGACAACGTCACAGC 779 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 720 TTACATGGTCGCCGCCACAACATTTACGGACGCTCACATCCCATACGACAACGTCACAGC 779 Query 780 CACCGCCACTCTCCACTACATCGGCCACACTGCCACCGTTTCTGCCTCCAAAAAGACCGT 839 ||| ||||| |||||||| ||||| |||||| |||||||||| |||||||||| ||||| Sbjct 780 CACTGCCACCCTCCACTATATCGGTCACACTTCCACCGTTTCCACCTCCAAAAAAACCGT 839 Query 840 TCTCGCATCACTTCCGCCGCAAAACGCAACTTGGGTTGCGACCAAATTCACTAGATCACT 899 ||||||||||||||| || ||||||||||| |||||||| |||||||||||||||||||| Sbjct 840 TCTCGCATCACTTCCACCTCAAAACGCAACATGGGTTGCAACCAAATTCACTAGATCACT 899 Query 900 CCGGAGCTTGAACTCCCGCGAGTATCCGGCTAGGGTTCCAACAACCGTGGACCATTCCTT 959 | ||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||||||| Sbjct 900 CAGGAGCTTAAACTCCCTCGAGTATCCAGCTAGGGTTCCAACAACCGTGGAACATTCCTT 959 Query 960 GTTCTTCACGGTAGGTCTTGGTGCAAACCCTTGCCAGAGCTGCAACAACGGTGTTCGCTT 1019 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 960 GTTCTTCACGGTAGGTCTTGGTGCAAACCCTTGCCAGAGTTGCAACAACGGTGTTCGCTT 1019 Query 1020 AGTGGCCGGAATAAACAACGTAACGTTTACCATGCCTGAGACCGCTTTGCTCCAGGCTCA 1079 ||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| Sbjct 1020 AGTGGCCGGAATAAACAACGTAACGTTTACCATGCCTAAAACCGCTTTACTCCAGGCTCA 1079 Query 1080 TTTCTTTAACATTTCCGGCGTGTTTACCGATGACTTCCCGGCGAACCCCTCGAATCCGTA 1139 ||||||||||||||||||||| |||||||| |||||||||||||| || || |||||||| Sbjct 1080 TTTCTTTAACATTTCCGGCGTATTTACCGACGACTTCCCGGCGAAACCTTCCAATCCGTA 1139 Query 1140 TGACTATACGGCACCGGTAAAGATCGGCGTTAATGCTGCAACGATGAAAGGGACAAAGCT 1199 ||||||||| ||||| |||||| |||||||||||||||| |||||||||||||||||||| Sbjct 1140 TGACTATACCGCACCAGTAAAGCTCGGCGTTAATGCTGCGACGATGAAAGGGACAAAGCT 1199 Query 1200 TTACAGGCTTCCATACAACGCGACGGTGCAAATTGTTCTGCAGAATACAGCGATGATCTT 1259 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1200 TTACAGGCTTCCATACAACGCGACGGTGCAAATTGTTCTGCAGAATACAGCAATGATCTT 1259 Query 1260 GTCCGATAACCATCCGTTTCATCTTCACGGGTTTAACTTCTTCGAAGTCGGTAGAGGTAT 1319 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct 1260 GTCCGATAACCATCCGTTTCATCTTCACGGGTTTAACTTCTTCGAAGTGGGTAGAGGTTT 1319 Query 1320 GGGGAACTTTAACCCGGAAAAAGATCCGAAAATGTTCAATTTAGTGGATCCGGTAGAAAG 1379 |||||| |||||||||||||||||||||||| ||| || || |||||||||||||| || Sbjct 1320 GGGGAATTTTAACCCGGAAAAAGATCCGAAAGCGTTTAACTTGGTGGATCCGGTAGAGAG 1379 Query 1380 AAACACCGTTGGAGTTCCAGCCGGTGGTTGGACTGCCATTAGATTCATCGCCGACAATCC 1439 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1380 AAACACCGTTGGAGTTCCAGCCGGTGGTTGGACTGCCATAAGATTCATCGCCGACAATCC 1439 Query 1440 AGGGGTGTGGTTCATGCATTGTCACTTGGAATTACATACAACTTGGGGATTAAAGATGGC 1499 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1440 AGGGGTATGGTTCATGCATTGTCACTTGGAGTTACATACAACTTGGGGATTAAAGATGGC 1499 Query 1500 ATTCGTCGTCGACAATGGTCACGGCCCTGACCAGGCATTGCTTCCTCCACCCGCCGATCT 1559 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct 1500 ATTCGTCGTTGACAATGGTCACGGCCCTGACCAGTCATTGCTTCCTCCACCCGCTGATCT 1559 Query 1560 TCCCAAATGTTAG 1572 ||||||||||||| Sbjct 1560 TCCCAAATGTTAG 1572 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77610042570 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5