BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496016
Length=2058
Score E
Sequences producing significant alignments: (Bits) Value
AT5G58930.1 | Symbols: | Protein of unknown function (DUF740) ... 2483 0.0
AT3G46990.1 | Symbols: | Protein of unknown function (DUF740) ... 603 3e-171
> AT5G58930.1 | Symbols: | Protein of unknown function (DUF740)
| chr5:23794315-23796461 REVERSE LENGTH=2147
Length=2147
Score = 2483 bits (1344), Expect = 0.0
Identities = 1908/2155 (89%), Gaps = 140/2155 (6%)
Strand=Plus/Plus
Query 1 TCTCTGCCACTCTCATGTGACACAATTGTACCATTTTTACTTTGATA-TTTGTAC-AAAA 58
||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| ||||
Sbjct 28 TCTCTGCCACTCTCATGTGACACAATTATACCATTTTTTCTTTGATATTTTGTACAAAAA 87
Query 59 ACATAACATTATTTTCTCTCTATTTTCATTAACTCATTTCTGTA---TT--TTAAGTA-C 112
|||||||||||||||||||||||||||||||||||||||||||| || |||| ||
Sbjct 88 ACATAACATTATTTTCTCTCTATTTTCATTAACTCATTTCTGTATTTTTCATTAACTATA 147
Query 113 AGAAA-TA-A-ATATAAATAT--GA--CATTCaaaa--aa-aaa-aagtataaa-gaaga 160
||||| || | | |||||||| | |||| |||| || ||| || || ||| | |||
Sbjct 148 AGAAAGTACAGAAATAAATATAATACGCATT-AAAATGAAGAAATAA-TA-AAACG-AGA 203
Query 161 -aaaaggtttaaggaaagggaaaggGTTA--GT-GT-TTGACAACG---C-C---A---- 204
|||||||||||||||||||||||||||| || || ||||||||| | | |
Sbjct 204 GAAAAGGTTTAAGGAAAGGGAAAGGGTTAGTGTAGTGTTGACAACGCCACTCTTGACTCT 263
Query 205 ------C-TCTTCTTCTCGAGATCCTAAAAATGTCACTGACAGATTCTTCAACTTCTTCA 257
| |||||||||||||||||| ||||||| ||||||||||||||||||||| |
Sbjct 264 CTTTCTCTTCTTCTTCTCGAGATCCTGAAAATGTGACTGACAGATTCTTCAACTTC-ACT 322
Query 258 CTC-TCTTCTTCCATTCACTGAACT-AAACCA--CCCTGAGAGCTATGACCCACCAAACC 313
||| ||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||
Sbjct 323 CTCTTCTTCTTCCATTCACTGAACTCAAACCACCCCCTGTGAGCTATGACCCACCAAACC 382
Query 314 CACCAGCGTCGTCGCCGTCGTCACTCCGCCGTCTGTCACCGTCATCCTACTTCCAAACCC 373
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 383 CATCAGCGTCGTCGCCGTCGTCACTCCGCCGTCTGTCACCGTCATCCTTCTTCCAAACCC 442
Query 374 ACCACCGGTTTCTGTGCCACCTGTCTCCGTGAACGTCTCTCCACCATCGAAGCTCTCTCT 433
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 443 ACCACTGGTTTCTGTGCCACCTGTCTCCGTGAACGTCTCTCTACCATCGAAGCTCTATCT 502
Query 434 TCCTCTGTTTCAGCTTCCTCTGAGCTCCGCCGTGTTCGTTCCTACTCCGTTCGTGACGCA 493
|||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||||||||
Sbjct 503 TCCTCTGTCTCAGCTTCCACTGAGCTCCGCCGTGTTCGCTCCTACTCTGTTCGTGACGCA 562
Query 494 TCCGCTTCTGCTTTGGACCAGCCACGACGCAGATCGTGTGATGTCAGGTC---T-A--AC 547
|||||||||| ||||||||||||||||||||||||||||||||| ||||| | | ||
Sbjct 563 TCCGCTTCTGTTTTGGACCAGCCACGACGCAGATCGTGTGATGTTAGGTCTAATCACGAC 622
Query 548 GACG--G-TGATGATGAGCTGCTACAGAGCTCGATTCGATTCCCCATTGTACCGGATTTG 604
|||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 623 GACGATGATGATGATGAGCTGCTAAAGAGCTCGATTCGATTCCCCATTGTACCGGATTTG 682
Query 605 AAAGAGGATGATGAAGAAGAAGAAGACGGAGAAGAAATTAGAGGTTTTGATGATGGTAAG 664
| ||| | ||| |||||||| ||||| | | || ||| | ||||||
Sbjct 683 ATAGA-G--GAT------GAAGAAGA---AGAAG--A-T-GA-----TGA-G--GGTAAG 718
Query 665 -AGACTCGTTGAAGAAGAAATCGAAGATGGAGAGCAGAAGACGATGAAGGAGTTAATAGA 723
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 AAG-CTCGTTGAAGAAGAAATCGAAGATGGAGAGCAGAAGACGATGAAGGAGTTAATAGA 777
Query 724 TCTGGAATCGAGAAATCAACAAATCAAGAAGAGCAATGGCAAAGATTCAGTTTTTAGCAG 783
|||||||||||||||||||| || | ||||| ||| ||||||||||| |||||||||||
Sbjct 778 TCTGGAATCGAGAAATCAAC-AA-C-TGAAGAACAACGGCAAAGATTCGGTTTTTAGCAG 834
Query 784 AACACTTAAGAAATTTTCACTCAAACATCATCTGAAGAATGGGAAAGTTCCAGATTCCGG 843
|||||| | ||| ||||||||||||||||||| ||| ||| |||||||||||||
Sbjct 835 AACACTCAGGAAGTTTTCACTCAAACATCATC----GAA----AAA-TTCCAGATTCCGG 885
Query 844 GAACAGTCTCGGCCGTCGCTCATGTGATGTGGATCCTAGGTTGTCTCTCGACGCAAGTCG 903
||||||||| || ||||| ||||||||||| ||||||||||||||||| |||||| ||||
Sbjct 886 GAACAGTCTTGGTCGTCGTTCATGTGATGTAGATCCTAGGTTGTCTCTTGACGCAGGTCG 945
Query 904 AATCTCGTTCGAGGAGCCTAGAGCTTCATGGGATGGATGTTTGATTGGAAAGACATATCC 963
| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 946 AGTCTCTTTCGACGAGCCTAGAGCTTCATGGGATGGATGTTTGATTGGAAAGACATATCC 1005
Query 964 AAAGCTGATTCCTTTGTCCTCTGTGACTGAAGATGTTAAAGCCTCGCCGGAGAAGATAAC 1023
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1006 AAAGCTGATACCTTTGTCCTCTGTGACTGAAGACGTTAAAGCCTCGCCGGAGAAGATAAC 1065
Query 1024 CGGTGAGAAAGAAGACGAAGAGGAGAAGAACAACCCAGGTGGGACAGCTCAAACGAGGGA 1083
||||||||| | ||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1066 CGGTGAGAAGGTAGAGGAAGATGAGAAGAACAATCCAGGTGGGACAGCTCAAACGAGGGA 1125
Query 1084 TTACTACTTGGATTCACGGCGGAGGAGAAGCTTCGATCGATCATCGAGACATGGATTGCT 1143
|||||||||||||||||| |||| |||||||| |||||||||||||||||||| |||||
Sbjct 1126 TTACTACTTGGATTCACGAAGGAGAAGAAGCTTTGATCGATCATCGAGACATGGTTTGCT 1185
Query 1144 TGAAGTTGATGAATTGAAAGCTATTTCGAATGCTAAGGTATCACCTGAAACTGTTGGTTT 1203
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1186 TGAAGTTGATGAATTGAAAGCTATTTCTAATGCTAAGGTATCACCTGAAACTGTTGGTTT 1245
Query 1204 GTTTCATGGAGCGAAGTTGCTTGTTACGGAGAGGGAACTTAGGGATTCGAATTGGTATTC 1263
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1246 GTTTCATGGAGCGAAGTTGCTTGTTACTGAGAGGGAACTTAGGGATTCGAATTGGTATTC 1305
Query 1264 AATTAAAAATTACAAACCGGAGAGCTTGGAGTTAGGTTCTAAAGTTGTTGGTTGTGTTGC 1323
||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1306 TATTAAGAATTACAAACCGGAGAGCTTGGAGTTAGGTTCTAAAGGTGTTGGTTGTGTTGC 1365
Query 1324 TGCTGGTGAGGTGAAGAAGCAAGATGGTTTTGGGTTGAAGAAGAGTGGGAAGAAATGGGG 1383
||||||||||||||||||||| ||||||||||||||||||||||| || ||||| |||
Sbjct 1366 TGCTGGTGAGGTGAAGAAGCAGGATGGTTTTGGGTTGAAGAAGAGCGGAAAGAACTGGTC 1425
Query 1384 TAAAGGATGGAACTTTTGGGGATTGATTCAGAGGAAAACCGATGTGGCCAAGAACGACAT 1443
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 1426 TAAAGGATGGAACTTTTGGGGATTGATTCAGAGGAAAACTGATGTGGCGAAGAACGAAAT 1485
Query 1444 CAAAACCGAGCAAAGTTTGAAACTTGGAGGAAATGCAATGGAGGGTTCTCTAGCTGAGTC 1503
||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||
Sbjct 1486 GAAAACCGAGCAAAGTTTGAAACTTGGAGGAAATACTATGGAGGGTTCTCTTGCTGAGTC 1545
Query 1504 TCTGTTGAAGCTTAGGAGGGTGGCTAAAGGGGAAACCAATGGTGATGTTAGCGATAAACT 1563
| |||||||||||||||| ||||||||||| ||||||||||||||||| || || |||||
Sbjct 1546 TTTGTTGAAGCTTAGGAGAGTGGCTAAAGGAGAAACCAATGGTGATGTCAGTGAGAAACT 1605
Query 1564 CTTAAGAAGCTACAGCGTTAGTGCGAGAAAGTCCTGCGATGGTATGTTACGTGGTGCTTC 1623
| ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1606 CATAAGAAGTTACAGCGTTAGTGCGAGAAAGTCTTGTGATGGTATGTTACGTGGTGCTTC 1665
Query 1624 TATTGTTAATGGATTTGAAGGTGGAAGAAGCTCTTGTGATGGTCTGTTTCATGGCTCTAT 1683
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1666 TATTGTTAATGGCTTTGAAGGTGGAAGAAGCTCTTGTGATGGTCTATTTCATGGCTCTAT 1725
Query 1684 TACTGGTATTGAGACCGGAAGAAGAAGCTCGTGTGAAGACGGATTGTTTCATGGCGTTGA 1743
|||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1726 AACTGGTGTTGAGACTGGAAGAAGAAGCTTGTGTGAAGACGGAATGTTTCATGGCGTTGA 1785
Query 1744 AGGCAAACGGAATCATCTTCTTCAGAGTGATGACAAGCTTGGGACTTACTCGCCGGACAA 1803
||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct 1786 AGGCAAACGGAATCATCTTCTCCAGAGTGATGACAAGCTTGGTACTTACTCGCCTGACAA 1845
Query 1804 CCTCAGAAATGGTATGGTTAGATTCTACTTGACGCCATTAAAAAGCCATACGACAAGCAA 1863
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 1846 CCTCAGAAATGGTATGGTTAGATTCTACTTGACGCCATTAAACAGCCATATGACAAGCAA 1905
Query 1864 CTCCGGTAAAACTAGGCTGATGAATTAATCAG-T-TC--ATGGTGGA---C-TG--G-A- 1911
|||||||||| ||||||||||||||| || | | || || || | | || | |
Sbjct 1906 GTCCGGTAAAAGTAGGCTGATGAATTAGTCTGATCTCTGATTGTTCAGTTCATGATGGAC 1965
Query 1912 -AT-TG-AAACTGTGTTGTAATTACCA-TG----TT-TGT-T-ACTTATTA-TCCCATTG 1959
|| | ||||||||||||||||| || | || ||| | ||||||| ||||| ||
Sbjct 1966 TATATTCAAACTGTGTTGTAATTAGCAATTACCCTTGTGTGTTACTTATTTCTCCCACTG 2025
Query 1960 TTCTATAGATATATGAACTAAAATCATATC-CCAt------ct-t-t-ctttttc-tt-- 2006
||||||||||||||||||||||||||||| |||| || | | ||||||| ||
Sbjct 2026 TTCTATAGATATATGAACTAAAATCATATGACCATGTTGTTCTCTCTTCTTTTTCCTTTT 2085
Query 2007 ct--tttt-ATGTGTATTAACGCTCTTAA-GAGTTCAATACAATGGTGATTTTGT 2057
|| |||| ||||||||||| |||||||| |||||||||||||| ||||||||||
Sbjct 2086 CTACTTTTTATGTGTATTAATGCTCTTAAAGAGTTCAATACAATAGTGATTTTGT 2140
> AT3G46990.1 | Symbols: | Protein of unknown function (DUF740)
| chr3:17311672-17313752 FORWARD LENGTH=2081
Length=2081
Score = 603 bits (326), Expect = 3e-171
Identities = 841/1077 (78%), Gaps = 86/1077 (8%)
Strand=Plus/Plus
Query 857 CGTCGCTCATGTGATGTGGATCCTAGGTTGTCTCTCGACGCAAGTCGAATCTCGTTCGAG 916
|||| ||| | ||||||||||||||| |||||| | || | | || | |||||||| |||
Sbjct 839 CGTCACTCTTCTGATGTGGATCCTAGATTGTCTTTTGATGGAGGTAGGATCTCGTTTGAG 898
Query 917 GAGCCTAGAG-CTTCATGGGATGGATGTTTGATTGGAAAGA-CATATCCA-AAGCTGATT 973
| ||||| | ||||||||||||| || |||||| |||| | ||||| || ||||| |
Sbjct 899 AAACCTAG-GTCTTCATGGGATGGTTGCTTGATT-GAAAAATCATAT-CACAAGCTTACG 955
Query 974 CCTTTGTCCT-CTGTGACTGAAGATGTTAAAGCCTCGCCGGAGAA-GATAACCGGTG-AG 1030
| |||| || ||||||| ||||||| ||||| || | || | | | || ||
Sbjct 956 ACATTGT-CTACTGTGACGGAAGATGCTAAAG-CT------A-AATG-T-GGTGTTGAAG 1004
Query 1031 AAAGAAGACGAAGAGGAG-A--AGAACAACCCAGGTGGGACAGCTCAAACGAGGGATTAC 1087
||||||| | ||||||| | |||| | ||||||||||| | |||||||| | | ||
Sbjct 1005 -AAGAAGAAGTAGAGGAGAAGGAGAAGAGTCCAGGTGGGACGGTTCAAACGAAGAACTAT 1063
Query 1088 TACTTGGATTCACGGCGGAGGAGAAG--CT--TCGATC-G-ATC-A-T-CGAGACATGGA 1138
|||| |||||| || ||||| || || | ||| || | || | | |||||| |||
Sbjct 1064 TACTCGGATTCTCGTCGGAGAAGGAGTTTTGATCGGTCGGTTTCGATTAAGAGACAAGGA 1123
Query 1139 TTGCTTGAAGTTGATGAATTGAAAGCTATTTCGAATGCTAAGGTATCACCTGAAACTGTT 1198
|||||||| ||||||||||||| || ||| |||||||| ||||||||||||||||||||
Sbjct 1124 TTGCTTGAGGTTGATGAATTGAGAGGTATATCGAATGCAAAGGTATCACCTGAAACTGTA 1183
Query 1199 GGTTTGTTTCATGGAGCGAAGTTGCTT-GTTACGGAGAGGGAACTTAGGGATTCGAATTG 1257
|||||||||||||| || ||||| || ||||| |||| |||||||||||||||||||||
Sbjct 1184 GGTTTGTTTCATGGTGCTAAGTT-ATTGGTTACAGAGAAGGAACTTAGGGATTCGAATTG 1242
Query 1258 GTATTCAATTAAAAAT-TACAAACCGGAGAGCT-TGGAGTTAGGTTCTAAA-G-TTG-TT 1312
|||||| ||||||||| | |||||| ||||| | || |||| ||||||| | | ||
Sbjct 1243 GTATTCGATTAAAAATGT-CAAACCAGAGAG-TAAAGAATTAGTTTCTAAAGGAAAGATT 1300
Query 1313 GGT-TGTGTTGCTGCTGGTGAGGTGAAGAAGCAAGATGGTTTTGGGTTGAAGAAGA-GTG 1370
|| | || ||||| |||||||| ||||||||| ||| || ||| ||| ||||| | |
Sbjct 1301 TGTAT-TGCTGCTGGTGGTGAGGGGAAGAAGCAGGATAGTGTTGAGTTAAAGAA-ACCTA 1358
Query 1371 GGAAGAAATGGGGTAAA-GGATGGAACTTTTGGGGATTGATTCAGAGGAAAACCGATGTG 1429
| ||||||| || ||| ||||||||| ||||||||||||| |||||||||| ||| |
Sbjct 1359 GAAAGAAAT-GGCCAAAGGGATGGAACATTTGGGGATTGATACAGAGGAAAAACGA---G 1414
Query 1430 GCCAAGAACGACATCAAA-ACCGAGCAAAGTTTGAAACTTGGAGGAAATGCAATGGAGGG 1488
|| |||||||| || ||| || ||||||| ||||||||||| ||||||||| | |||||
Sbjct 1415 GCGAAGAACGAGAT-AAAGACTGAGCAAATTTTGAAACTTGAAGGAAATGCGGTTGAGGG 1473
Query 1489 TTCTCTAGCTGAGTCTCTGTTGAAGCTTAGGAGGGT-GGCTAAAGGGGAAACCAATGGTG 1547
|||| | ||||| |||||||| ||||||||||| || || |||||| |||||||||| ||
Sbjct 1474 TTCTTTGGCTGAATCTCTGTTAAAGCTTAGGAGAGTAGG-TAAAGGAGAAACCAATGTTG 1532
Query 1548 ATGTTAGCGATAAACTCTT-AAGAAGCTACAGCGTTAGTGCGAGAAAGTCCTGCGATGGT 1606
|||||| || || || || || |||||| || || |||||||||||||| ||||||||
Sbjct 1533 GTGTTAGTGAGAAGCTTTTGAA-AAGCTATAGTGTAAGTGCGAGAAAGTCTTGCGATGGC 1591
Query 1607 ATG-TTACGTGGTGCT-TCTATTGTTAATGGATTTGAAGGTGGAAGAAGCTCTTGTGATG 1664
|| || |||||||| | ||||| | ||| ||||||||||||||||||||||||||||
Sbjct 1592 GTGCGTA-GTGGTGCTAAC-ATTGTCAGTGGCTTTGAAGGTGGAAGAAGCTCTTGTGATG 1649
Query 1665 GTCTGTTTCATGGCTCTATTA-CTGGTATTGAGACCGGAAGAAGAAGCTCGTGTGAAGAC 1723
||||||||||||| ||||||| | | | ||||| | ||||||| | ||| ||||| |
Sbjct 1650 GTCTGTTTCATGGATCTATTAACAG-TGTTGAGGCTGGAAGAA-A--CTCTTGTGATG-- 1703
Query 1724 GGATTGTTTCATGGCGTTGAAGGCAAACGGAATCATCTTCTTC---AGAGTGATGACAA- 1779
| |||| || ||||| |||||||||||| ||||||| ||||| |||| | | |||
Sbjct 1704 G-ATTGGTTAATGGCATTGAAGGCAAACAAAATCATCATCTTCTCCAGAGAAACG-CAAA 1761
Query 1780 -GCTTGGGACTTACTCGCCG-GACAACCTC-AGAA-ATGGTATGGTTAGATTCTA-CTTG 1834
| |||| || | | ||| || ||||| |||| | | |||| |||||||||| || |
Sbjct 1762 TG-TTGGTACGTGCA-GCCAAGAAAACCTTGAGAAGA-G-TATGTTTAGATTCTATCT-G 1816
Query 1835 ACG-CCATTAAAAAGCCATACGACAAGCAACTCCGGTAAAACTAGGCTGATGAATTA 1890
| | || |||| ||||||| ||| ||||| ||||| || | |||||||| ||||||
Sbjct 1817 A-GTCCGGTAAAGAGCCATAAGACTAGCAAATCCGGGAAGAGTAGGCTGAAGAATTA 1872
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102007507440
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5