BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496065
Length=1462
Score E
Sequences producing significant alignments: (Bits) Value
AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23949739-23951837 ... 2152 0.0
AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128263-1713021... 1343 0.0
AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-157... 1046 0.0
AT3G12110.1 | Symbols: ACT11 | actin-11 | chr3:3857843-3859798 ... 961 0.0
AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18215872-18218313 ... 854 0.0
AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:... 789 0.0
> AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23949739-23951837
FORWARD LENGTH=1544
Length=1544
Score = 2152 bits (1165), Expect = 0.0
Identities = 1287/1347 (96%), Gaps = 4/1347 (0%)
Strand=Plus/Plus
Query 1 AGGATTTAGCAGAGACTAACGGCCACGATTTGTTTAGAGTCAAGCGATATAAAGCAAAGC 60
||||||||||| | ||||| ||||||||| |||| |||||||||||||| ||||||||||
Sbjct 1 AGGATTTAGCAAAAACTAATGGCCACGATCTGTTAAGAGTCAAGCGATAAAAAGCAAAGC 60
Query 61 TCCTTTCATTTTTTCAGAAATTTTGAACCCATTAATTCAAGGCGGGGCGTTTCAGGATCC 120
||||||| |||||||||||||||||||||| ||||||| ||||||||| ||||||||
Sbjct 61 TCCTTTCGTTTTTTCAGAAATTTTGAACCC----ATTCAAGTCGGGGCGTTGCAGGATCC 116
Query 121 GATTTCAAGTTTTGTTCTTCGTTAAAATTCACCAGACTGAAGAATGGCTGACGGTGAAGA 180
|||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 117 GATTTCTCGTTTTGTTCTTCGTTAAAATTCACCAGATTGAAGAATGGCGGACGGTGAAGA 176
Query 181 CATTCAACCGCTAGTTTGTGACAATGGAACGGGAATGGTTAAGGCTGGATTCGCGGGTGA 240
|||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 177 CATTCAACCGCTTGTTTGTGACAATGGAACTGGAATGGTTAAGGCCGGATTCGCGGGTGA 236
Query 241 CGATGCGCCAAGAGCGGTTTTTCCAAGCATTGTAGGCCGTCCTCGCCACACGGGTGTGAT 300
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 237 CGATGCACCAAGAGCGGTTTTTCCGAGCATTGTAGGCCGTCCTCGCCACACGGGTGTGAT 296
Query 301 GGTTGGGATGGGACAAAAGGATGCTTATGTTGGAGACGAGGCTCAATCAAAACGTGGTAT 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGTAGGGATGGGACAAAAGGATGCTTATGTTGGAGACGAGGCTCAATCAAAACGTGGTAT 356
Query 361 TTTGACTCTCAAATACCCAATTGAGCATGGAATTGTTAATAATTGGGACGACATGGAGAA 420
|||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 357 CTTGACTCTGAAGTACCCAATTGAGCATGGAATTGTTAATAATTGGGATGACATGGAGAA 416
Query 421 GATTTGGCATCACACTTTCTACAATGAGCTTCGTGTGGCACCTGAGGAGCACCCGGTTCT 480
|||||||||||||||||||||||||||||||||||| || ||||| || || ||||||||
Sbjct 417 GATTTGGCATCACACTTTCTACAATGAGCTTCGTGTTGCCCCTGAAGAACATCCGGTTCT 476
Query 481 CTTAACCGAAGCTCCTCTCAATCCGAAAGCTAACCGTGAGAAGATGACTCAAATCATGTT 540
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 477 CTTGACCGAAGCTCCTCTCAATCCGAAAGCTAACCGTGAGAAGATGACTCAGATCATGTT 536
Query 541 TGAGACATTTAACACTCCTGCTATGTATGTTGCCATTCAAGCTGTTCTCTCACTCTATGC 600
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 TGAGACATTCAATACTCCTGCTATGTATGTTGCCATTCAAGCTGTTCTCTCACTCTATGC 596
Query 601 CAGTGGCCGTACAACTGGTATTGTTTTGGACTCTGGAGATGGTGTGAGCCACACGGTACC 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 CAGTGGCCGTACAACTGGTATTGTTTTGGACTCTGGAGATGGTGTGAGCCACACGGTACC 656
Query 661 AATCTACGAGGGTTACGCTCTTCCACACGCGATCCTACGTCTTGACCTAGCGGGTCGTGA 720
||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct 657 AATCTACGAGGGTTACGCTCTCCCACACGCAATCCTACGTCTTGACCTAGCAGGTCGTGA 716
Query 721 CCTCACAGACCACCTCATGAAAATCCTGACAGAACGTGGCTACTCCTTCACCACAACTGC 780
|||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 717 CCTCACGGACCACCTCATGAAAATCCTCACAGAGCGTGGATACTCCTTCACCACAACTGC 776
Query 781 TGAGCGTGAAATTGTAAGAGACATGAAAGAGAAGCTCTCTTATATTGCTCTAGACTACGA 840
||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 777 TGAACGTGAAATTGTTAGAGACATGAAAGAGAAGCTCTCTTACATTGCTCTAGACTTCGA 836
Query 841 GCAAGAGCTAGAGACTTCCAAAACAAGCTCGTCCGTTGAGAAAAGCTTCGAGCTTCCTGA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 GCAAGAGCTAGAGACTTCCAAAACAAGCTCGTCCGTTGAGAAAAGCTTCGAGCTTCCTGA 896
Query 901 CGGACAAGTGATAACCATTGGAGCAGAGCGGTTTCGGTGTCCGGAAGTTCTGTTTCAGCC 960
||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||
Sbjct 897 TGGACAAGTGATAACCATTGGAGCAGAGAGGTTCCGGTGTCCGGAAGTTCTGTTCCAGCC 956
Query 961 GTCAATGATCGGAATGGAAAATCCGGGAATCCATGAAACCACATATAACTCTATCATGAA 1020
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 957 GTCAATGATCGGAATGGAAAATCCAGGAATCCATGAAACCACATATAACTCTATCATGAA 1016
Query 1021 ATGTGATGTGGATATTAGGAAAGATTTGTATGGTAACATTGTGCTAAGTGGTGGAACCAC 1080
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1017 ATGTGATGTGGATATTAGGAAAGACTTGTATGGTAACATTGTGCTAAGTGGTGGAACCAC 1076
Query 1081 AATGTTTGGAGGGATTGGTGATAGAATGAGCAAAGAAATTACGGCTTTGGCTCCAAGTAG 1140
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1077 AATGTTTGGAGGGATTGGTGATAGAATGAGCAAAGAGATTACGGCTTTGGCTCCAAGTAG 1136
Query 1141 TATGAAGATTAAGGTCGTGGCTCCACCGGAGAGGAAGTACAGTGTTTGGATCGGTGGCTC 1200
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1137 TATGAAGATTAAGGTCGTGGCTCCACCGGAGAGGAAGTACAGTGTATGGATCGGTGGCTC 1196
Query 1201 TATATTAGCTTCACTCAGCACTTTCCAGCAGATGTGGATTGCGAAAGCAGAGTACGATGA 1260
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 TATATTGGCTTCACTCAGCACTTTCCAGCAGATGTGGATTGCGAAAGCAGAGTACGATGA 1256
Query 1261 ATCTGGACCCTCAATTGTGCATAGGAAATGCTTCTAATCACAGTTCCTAAAATCACCAAA 1320
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1257 ATCTGGACCCTCAATAGTGCATAGGAAATGCTTCTAATCACAGTTCCTAAGATCACCAAA 1316
Query 1321 GGAAGACAGAAGTAAAAGTAAAAGACA 1347
|||||| |||||||||||||||||||
Sbjct 1317 CGAAGACGGAAGTAAAAGTAAAAGACA 1343
> AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128263-17130210
FORWARD LENGTH=1453
Length=1453
Score = 1343 bits (727), Expect = 0.0
Identities = 1011/1151 (88%), Gaps = 8/1151 (1%)
Strand=Plus/Plus
Query 154 AGACTGAAGAATGGCTGACGGTGAAGACATTCAACCGCTAGTTTGTGACAATGGAACGGG 213
||| |||| |||||| ||||||||||| ||||| ||||| ||||| || || || || ||
Sbjct 81 AGATTGAAAAATGGCGGACGGTGAAGATATTCAGCCGCTCGTTTGCGATAACGGGACTGG 140
Query 214 AATGGTTAAGGCTGGATTCGCGGGTGACGATGCGCCAAGAGCGGTTTTTCCAAGCATTGT 273
|||||| |||||||| || || ||||| ||||| || ||||| || || ||||| || ||
Sbjct 141 AATGGTCAAGGCTGGTTTTGCAGGTGATGATGCTCCTAGAGCTGTATTCCCAAGTATCGT 200
Query 274 AGGCCGTCCTCGCCACACGGGTGTGATGGTTGGGATGGGACAAAAGGATGCTTATGTTGG 333
|||||||| || |||||||| ||||||||||| ||||||||||||||||| || || ||
Sbjct 201 TGGCCGTCCACGTCACACGGGAGTGATGGTTGGAATGGGACAAAAGGATGCATACGTCGG 260
Query 334 AGACGAGGCTCAATCAAAACGTGGTATTTTGACTCTCAAATACCCAATTGAGCATGGAAT 393
||||||||| || || ||||||||||| ||||||||||| || |||||||||||||| ||
Sbjct 261 AGACGAGGCACAGTCGAAACGTGGTATCTTGACTCTCAAGTATCCAATTGAGCATGGTAT 320
Query 394 TGTTAATAATTGGGACGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCG 453
||| || || ||||| || |||||||||||||||||||||||||||||||||||||| ||
Sbjct 321 TGTCAACAACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTGCG 380
Query 454 TGTGGCACCTGAGGAGCACCCGGTTCT-CTTAACCGAAGCTCCTCTCAATCCGAAAGCTA 512
||| || || || ||||| |||||| | | |||||||||| || || |||||||| ||||
Sbjct 381 TGTTGCCCCGGAAGAGCATCCGGTTTTGC-TAACCGAAGCGCCGCTTAATCCGAAGGCTA 439
Query 513 ACCGTGAGAAGATGACTCAAATCATGTTTGAGACATTTAACACTCCTGCTATGTATGTTG 572
|||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 440 ACCGTGAGAAGATGACACAGATCATGTTTGAAACATTCAACACTCCTGCTATGTATGTTG 499
Query 573 CCATTCAAGCTGTTCTCTCACTCTATGCCAGTGGCCGTACAACTGGTATTGTTTTGGACT 632
||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||
Sbjct 500 CCATTCAAGCTGTTCTCTCCCTCTATGCTAGTGGCCGTACTACTGGTATTGTTTTGGACT 559
Query 633 CTGGAGATGGTGTGAGCCACACGGTACCAATCTACGAGGGTTACGCTCTTCCACACGCGA 692
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 560 CTGGAGATGGTGTGAGCCACACGGTACCAATCTACGAGGGTTATGCACTTCCACACGCAA 619
Query 693 TCCTACGTCTTGACCTAGCGGGTCGTGACCTCACAGACCACCTCATGAAAATCCTGACAG 752
|||| |||||||| || || ||||||||||| || |||||||||||||||||||||||||
Sbjct 620 TCCTGCGTCTTGATCTTGCAGGTCGTGACCTAACCGACCACCTCATGAAAATCCTGACAG 679
Query 753 AACGTGGCTACTCCTTCACCACAACTGCTGAGCGTGAAATTGTAAGAGACATGAAAGAGA 812
| ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||
Sbjct 680 AGCGTGGTTACTCATTCACCACAACTGCTGAGCGTGAGATTGTCAGAGACATGAAGGAGA 739
Query 813 AGCTCTCTTATATTGCTCTAG-ACTACGAGCAAGAGCTAGAGACTTCCAAAACAAGCTCG 871
||||||| || ||||| || | |||| ||||||||||| |||||||||||||| |||||
Sbjct 740 AGCTCTCGTACATTGC-CTTGGACTATGAGCAAGAGCTTGAGACTTCCAAAACCAGCTCA 798
Query 872 TCCGTTGAGAAAAGCTTCGAGCTTCCTGACGGACAAGTGATAACCATTGGAGCAGAGCGG 931
|| || ||||| ||||||||||| || ||||| |||||||||||||| || ||||||||
Sbjct 799 TCTGTGGAGAAGAGCTTCGAGCTGCCAGACGGTCAAGTGATAACCATCGGGGCAGAGCG- 857
Query 932 TTTC-GGTGTCCGGAAGTTCTGTTTCAGCCGTCAATGATCGGAATGGAAAATCCGGGAAT 990
|||| ||||||| ||||||||||| ||||| || ||||||||||||||||||||||||||
Sbjct 858 TTTCCGGTGTCCTGAAGTTCTGTTCCAGCCATCCATGATCGGAATGGAAAATCCGGGAAT 917
Query 991 CCATGAAACCACATATAACTCTATCATGAAATGTGATGTGGATATTAGGAAAGAT-TTGT 1049
|||||||| || || ||||| ||||||||||||||||||||||| ||||| ||| || |
Sbjct 918 TCATGAAACTACTTACAACTCAATCATGAAATGTGATGTGGATATCAGGAAGGATCTT-T 976
Query 1050 ATGGTAACATTGTGCTAAGTGGTGGAACCACAATGTTTGGAGGGATTGGTGATAGAATGA 1109
|||| ||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||
Sbjct 977 ATGGAAACATTGTGCTTAGTGGTGGCACCACAATGTTTGGCGGGATTGGTGATAGGATGA 1036
Query 1110 GCAAAGAAATTACGGCTTTGGCTCCAAGTAGTATGAAGATTAAGGTCGTGGCTCCACCGG 1169
| |||||||| || || ||||| || || ||||||||||| || || || ||||||||||
Sbjct 1037 GTAAAGAAATCACCGCGTTGGCGCCGAGCAGTATGAAGATCAAAGTGGTTGCTCCACCGG 1096
Query 1170 AGAGGAAGTACAGTGTTTGGATCGGTGGCTCTATATTAGCTTCACTCAGCACTTTCCAGC 1229
| |||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||
Sbjct 1097 AAAGGAAGTACAGTGTTTGGATCGGTGGCTCTATCTTGGCTTCTCTCAGTACTTTCCAGC 1156
Query 1230 AGATGTGGATTGCGAAAGCAGAGTACGATGAATCTGGACCCTCAATTGTGCATAGGAAAT 1289
||||||||||||||||||| ||||| |||||||||||||| || || || || ||||| |
Sbjct 1157 AGATGTGGATTGCGAAAGCCGAGTATGATGAATCTGGACCGTCGATCGTCCACAGGAAGT 1216
Query 1290 GCTTCTAATCA 1300
|||||| ||||
Sbjct 1217 GCTTCTGATCA 1227
> AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-15781561
FORWARD LENGTH=1618
Length=1618
Score = 1046 bits (566), Expect = 0.0
Identities = 956/1146 (83%), Gaps = 19/1146 (2%)
Strand=Plus/Plus
Query 159 GAAGAATGGCTGACGGTGAAGACATTCAACCGCTAGTTTGTGACAATGGAACGGGAATGG 218
||| ||||||||| ||||||||||||||||| || ||||| ||||||||||| |||||||
Sbjct 161 GAA-AATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGG 219
Query 219 TTAAGGCTGGATTCGC-GGGTGACGATGCGCCAAGAGCGGTTTTTCCAAGCATTGTAGGC 277
|||||||||| || || ||| || ||||| || ||||| || ||||| || ||||| ||
Sbjct 220 TTAAGGCTGGTTTTGCTGGG-GATGATGCACCTAGAGCTGTGTTTCCTAGTATTGTGGGT 278
Query 278 CGTCCTCGCCACACGGGTGTGATGGTTGGGATGGGACAAAAGGATGCTTATGTTGGAGAC 337
|||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 279 CGTCCTCGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGAT 338
Query 338 GAGGCTCAATCAAAACGTGGTATTTTGACTCTCAAATACCCAATTGAGCATGGAATTGTT 397
|| |||||||| ||||| |||||||| |||||||| ||||| |||||||||||||||||
Sbjct 339 GAAGCTCAATCCAAACGAGGTATTTTAACTCTCAAGTACCCTATTGAGCATGGAATTGTC 398
Query 398 AATAATTGGGACGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGTG 457
|| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 399 AACAATTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTT 458
Query 458 GCACCTGAGGAGCACCCGGTTCT-CTTAACCGAAGCTCCTCTCAATCCGAAAGCTAACCG 516
|| |||||||| || || |||| |||| |||| || || || || ||||||||||| ||
Sbjct 459 GCTCCTGAGGAACATCCTATTCTACTTA-CCGAGGCACCGCTTAACCCGAAAGCTAATCG 517
Query 517 TGAGAAGATGACTCAAATCATGTTTGAGACATTT-AACACTCCTGCTATGTATGTTGCCA 575
|||||||||||||||||||||||||||||| ||| || | |||||||||||||| || |
Sbjct 518 TGAGAAGATGACTCAAATCATGTTTGAGAC-TTTCAATGCCCCTGCTATGTATGTGGCTA 576
Query 576 TTCAAGCTGTTCTCTCACTCTATGCCAGTGGCCGTACAACTGGTATTGTTTTGGACTCTG 635
|||| |||||||| || || ||||||||||| ||||| || |||||||| | |||||||
Sbjct 577 TTCAGGCTGTTCTTTCTCTTTATGCCAGTGGTCGTACTACCGGTATTGTGCTCGACTCTG 636
Query 636 GAGATGGTGTGAGCCACACGGTACCAATCTACGAGGGTTACGCTCTTCCACACGCGATCC 695
||||||||||||||||||| || || ||||| ||||| || || |||||||| || ||||
Sbjct 637 GAGATGGTGTGAGCCACACTGTTCCTATCTATGAGGGGTATGCACTTCCACATGCTATCC 696
Query 696 TACGTCTTGACCTAGCGGGTCGTGACCTCACAGAC-CACCTCATGAAAATCCTGACAGAA 754
|||||||||| || || |||||||||||||| || | | | ||||| ||||| || ||
Sbjct 697 TACGTCTTGATCTTGCTGGTCGTGACCTCACGGATGCGC-TGATGAAGATCCTAACCGAG 755
Query 755 CGTGGCTACTCCTTCACCACAACTGCTGAGCGTGAAATTGTAAGAGACATGAAAG-AGAA 813
||||| ||||| |||||||| || || |||||||||||||| |||||||| |||| ||||
Sbjct 756 CGTGGTTACTCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACAT-AAAGGAGAA 814
Query 814 GCTCT-CTTATATTGCTCTAGACTACGAGCAAGAGCTAGAGACTTCCAAAACAAGCTCGT 872
||| | || | |||||||| ||||||||||| || || ||||| ||||||| ||||| |
Sbjct 815 GCTTTGCT-ACATTGCTCTTGACTACGAGCAGGAACTCGAGACAGCCAAAACCAGCTCAT 873
Query 873 CCGTTGAGAA-AAGCTTCGAGCTTCCTGACGGACAAGTGATAACCATTGGAGCAGAGCGG 931
| |||||||| || || |||||| ||||| || |||||||| ||||||||| |||||||
Sbjct 874 CTGTTGAGAAGAA-CTACGAGCTACCTGATGGGCAAGTGATCACCATTGGATCAGAGCGA 932
Query 932 TTTCGGTGTCCGGAAGTTCTGTTTC-AGCCGTCAATGATCGGAATGGAAAATCCGGGAAT 990
|| || ||||| || ||||| || | |||| || ||||| || ||||| ||| | || ||
Sbjct 933 TTCCGTTGTCCTGAGGTTCT-TTACCAGCCATCTATGATTGGTATGGAGAATGCTGGTAT 991
Query 991 CCATGAAACCACATATAACTCTATCATGAAATGTGATGTGGATATTAGGAAAGATTTGTA 1050
|||||||||||| |||||||| || ||||| |||||||| || || ||||| || |||||
Sbjct 992 CCATGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATCAGGAAGGACTTGTA 1051
Query 1051 TGGTAACATTGTGCTAAGTGGTGGAACCACAATGTTTGGAGGGATTGGTGATAGAATGAG 1110
|||||||||||||| |||||||||||||||||||| || || | || ||||||||
Sbjct 1052 CGGTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCTGGAATCGCCGACAGAATGAG 1111
Query 1111 CAAAGAAATTACGGCTTTGGCTCCAAGTAGTATGAAGATTAAGGTCGTGGCTCCACCGGA 1170
|||||| || || |||||||||||||| || |||||||| || ||||| || || || ||
Sbjct 1112 CAAAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTGCCCCTCCAGA 1171
Query 1171 GAGGAAGTACAGTGTTTGGATCGGTGGCTCTATATTAGCTTCACTCAGCACTTTCCAGCA 1230
|||||| ||| ||| ||||| || || || || || || || ||||| || ||||||||
Sbjct 1172 GAGGAAATACTCTGTCTGGATTGGAGGGTCCATCTTGGCCTCCCTCAGTACCTTCCAGCA 1231
Query 1231 GATGTGGATTGCGAAAG-CAGAGTACGATGAATCTGGACCCTCAATTGTGCATAGGAAAT 1289
||||||||| || |||| ||||||| || || || || || || ||||| || ||||| |
Sbjct 1232 GATGTGGATCGC-AAAGGCAGAGTATGACGAGTCAGGTCCATCGATTGTTCACAGGAAGT 1290
Query 1290 GCTTCT 1295
||||||
Sbjct 1291 GCTTCT 1296
> AT3G12110.1 | Symbols: ACT11 | actin-11 | chr3:3857843-3859798
FORWARD LENGTH=1434
Length=1434
Score = 961 bits (520), Expect = 0.0
Identities = 944/1150 (82%), Gaps = 23/1150 (2%)
Strand=Plus/Plus
Query 159 GAAGAATGGCTGACGGTGAAGACATTCAACCGCTAGTTTGTGACAATGGAACGGGAATGG 218
||| |||||| || |||||||||||||| || || || |||||||||||||| |||||||
Sbjct 108 GAA-AATGGCAGATGGTGAAGACATTCAGCCTCTCGTCTGTGACAATGGAACCGGAATGG 166
Query 219 TTAAGGCTGGATTCGCGGGTGACGATGCGCCAAGAGCGGTTTTTCCAAGCATTGTAGGCC 278
||||||||||||| || || || ||||| |||||||| || || || ||||| || || |
Sbjct 167 TTAAGGCTGGATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTC 226
Query 279 GTCCTCGCCACACGGGTGTGATGGTTGGGATGGGACAAAAGGATGCTTATGTTGGAGACG 338
||||||| ||||| ||||| |||||||| ||||||||||| |||||||| ||||| || |
Sbjct 227 GTCCTCGACACACTGGTGTCATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATG 286
Query 339 AGGCTCAATC-AAAACGTGGTATTTTGAC-TCTCAAATACCCAATTGAGCATGGAATTGT 396
||||||| || || | | ||||||||||| | | ||||| || ||||||||||| |||||
Sbjct 287 AGGCTCAGTCTAAGA-GAGGTATTTTGACAT-TGAAATATCCTATTGAGCATGGTATTGT 344
Query 397 TAATAATTGGGACGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGT 456
|| || ||||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 345 TAGCAACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGT 404
Query 457 GGCACCTGAGGAGCACCCGGTTCT-CTTAACCGAAGCTCCTCTCAATCCGAAAGCTAACC 515
|||||||| || ||||| ||||| || | | || ||||||||||| || || || || |
Sbjct 405 TGCACCTGAAGAACACCCTGTTCTTCTCA-CTGAGGCTCCTCTCAACCCCAAGGCCAATC 463
Query 516 GTGAGAAGATGACTCAAATCATGTTTGAGACATTT-AACACTCCTGCTATGTATGTTGCC 574
||||||| |||||||| || |||||||| || ||| ||||||||||| |||||||| ||
Sbjct 464 GTGAGAAAATGACTCAGATTATGTTTGAAAC-TTTCAACACTCCTGCCATGTATGTCGCT 522
Query 575 ATTCAAGCTGTTCTCTCACTCTATGCCAGTGGCCGTACAACTGGTATTGTTTTGGACTCT 634
|| ||||||||||| || ||||| || ||||| ||||| ||||||||||| |||||||||
Sbjct 523 ATCCAAGCTGTTCTTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTGTTGGACTCT 582
Query 635 GGAGATGGTGTGAGCCACACGGTACCAATCTACGAGGGTTACGCTCTTCCACACGCGATC 694
|||||||||||||| ||||| || ||||| || || || || ||||||||||| || ||
Sbjct 583 GGAGATGGTGTGAGTCACACTGTTCCAATTTATGAAGGATATGCTCTTCCACATGCTATT 642
Query 695 CTACGTCTTG-ACCTAGCGGGTCGTGACCTCACAGACCACCTCATGAAAATCCTGACAGA 753
|| ||| ||| |||| || || |||||||| || || |||||||||| ||| | || ||
Sbjct 643 CTGCGT-TTGGACCTTGCAGGCCGTGACCTTACTGATTACCTCATGAAGATCTTAACCGA 701
Query 754 ACGTGGCTACTCCTTCACCACAACTGCTGAGCGTGAAATTGTAAGAGACATGAAAGAGAA 813
||||| ||||| ||||| || | || ||||||||||| ||||| || ||||||||||
Sbjct 702 GCGTGGTTACTCATTCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAAGAGAA 761
Query 814 GCTCT-CTTATATTGCTCTAGACTACGAGCAAGAGCTAGAGACTTCCAAA-ACAAGCTCG 871
|| | |||| || || || ||||||||||||||| | || || | ||| ||||||||
Sbjct 762 ACT-TGCTTACATAGCACTTGACTACGAGCAAGAGATGGAAACAGC-AAACACAAGCTCA 819
Query 872 TCCGTTGAGAAAAGCT-TCGAGCTT-CCTGACGGACAAGTGATAACCATTGGAGCAGAGC 929
||||||||||| |||| | ||| || ||||| ||||| ||||| |||||||||| ||||
Sbjct 820 TCCGTTGAGAAGAGCTAT-GAG-TTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGA 877
Query 930 GGTTTCGGTGTCCGGAAGTTCTGTTTCAGCCGTCAATGATCGGAATGGAAAATCCGGGAA 989
| || || || ||||| |||||||| || ||||| || | ||||||||| | | || |
Sbjct 878 GATTCCGCTGCCCGGAGGTTCTGTTCCAACCGTCTTTGGTGGGAATGGAAGCTGCTGGTA 937
Query 990 TCCATGAAACCACATATAACTCTATCATGAAATGTGATGTGGATATTAGGAAAGATTTGT 1049
| || || ||||| || || || |||||||| |||||||||||||| ||||| ||| |||
Sbjct 938 TTCACGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGT 997
Query 1050 ATGGTAACATTGTGCTAAGTGGTGGAACCACAATGTTTGGAGGGATTGGTGATAGAATGA 1109
|||| ||||||||||| |||||||||||||| ||||| || |||| |||||| ||||
Sbjct 998 ATGGAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGA 1057
Query 1110 GCAAAGAAATTACGGCTTTGGCTCCAAGTAGTATGAAGATTAAGGTCGTGGCTCCACCGG 1169
||||||| || || |||||||||||||| || |||||||||||||| || |||||||| |
Sbjct 1058 GCAAAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAG 1117
Query 1170 AGAGGAAGTACAGTGTTTGGATCGGTGGCTCTATAT-TAGCTTCACTCAGCACTTTCCAG 1228
|||||||||||||||| ||||| || ||||| || | |||| |||||||| || |||||
Sbjct 1118 AGAGGAAGTACAGTGTCTGGATTGGAGGCTCCAT-TCTAGCATCACTCAGTACCTTCCAA 1176
Query 1229 CAGATGTGGATTGCGAAAG-CAGAGTACGATGAATCTGGACCCTCAATTGTGCATAGGAA 1287
||||||||||| || |||| | ||||| ||||| || || || ||||| || || |||||
Sbjct 1177 CAGATGTGGATAGC-AAAGGCCGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAA 1235
Query 1288 ATGCTTCTAA 1297
|||||||||
Sbjct 1236 GTGCTTCTAA 1245
> AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18215872-18218313
FORWARD LENGTH=1707
Length=1707
Score = 854 bits (462), Expect = 0.0
Identities = 933/1157 (81%), Gaps = 46/1157 (4%)
Strand=Plus/Plus
Query 164 ATGGCTGACGGTGAAGACATTCAACCGCTAGTTTGTGACAATGGAACGGGAATGGTTAAG 223
||||| || | ||| ||||||||||| | || ||||||||||| || ||||||||||||
Sbjct 208 ATGGCCGATGCTGATGACATTCAACCTATTGTCTGTGACAATGGTACTGGAATGGTTAAG 267
Query 224 GCTGGATTCGCGGGTGACGATGCGCCAAGAGCGGTTTTTCCAAGCATTGTAGGCCGTCCT 283
||||||||||| || || ||||| || ||||||||||| || || |||| || || |||
Sbjct 268 GCTGGATTCGCTGGAGATGATGCTCCCAGAGCGGTTTTCCCCAGTGTTGTTGGTCGACCT 327
Query 284 CGCCA-CACGGGTGTGATGGTTGGGATGGGA-CA-AAAGGATGCTTATGTTGGAGACGAG 340
| || || ||||| ||||||||||| | | || ||| ||||| |||||||| || ||
Sbjct 328 AGACATCA-TGGTGTCATGGTTGGGAT-GAATCAGAAA-GATGCGTATGTTGGTGATGAA 384
Query 341 GCTCAAT-CAAAACGTGGTATTTTGAC-TCTCAAATACCCAATTGAGCATGGAATTGTTA 398
|| |||| ||||| | ||||| | || | | |||||||| ||||||||||| ||||||
Sbjct 385 GCACAATCCAAAA-GAGGTATCCTCACAT-TGAAATACCCTATTGAGCATGGTGTTGTTA 442
Query 399 ATAATTGGGACGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGTGG 458
|| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| | |
Sbjct 443 GCAACTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTATTG 502
Query 459 CACCTGAGGAGCACCCGGTTCT-CTTAACCGAAGCTCCTCTCAATCCGAAAGCTAACCGT 517
| ||||| |||||||||||||| |||| |||| |||||||| || || ||||| ||| |
Sbjct 503 CTCCTGAAGAGCACCCGGTTCTACTTA-CCGAGGCTCCTCTTAACCCAAAAGCCAACAGA 561
Query 518 GAGAAGATGACTCAAATCATGTTTGAGACATTTAACACTCCTGCTATGTATGTTGCCATT 577
|||||||||||||| |||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct 562 GAGAAGATGACTCAGATCATGTTTGAGACCTTTAATTCTCCAGCTATGTATGTTGCCATT 621
Query 578 CAAGCTGTTCTCTCACTCTATGCCAGTGGCCGTACAACTGGTATTGTTTTGGACTCTGGA 637
||||||||||| ||||| || |||||||| |||||||| |||||||| |||||||||||
Sbjct 622 CAAGCTGTTCTATCACTTTACGCCAGTGGTCGTACAACCGGTATTGTGTTGGACTCTGGT 681
Query 638 GATGGTGTGAGC-CACACGGTACCAATCTACGAGGGTTACGCTCTTCCACACGCGATCCT 696
||||||||| | ||||| || || ||||||||||||| | | |||||||| || |||||
Sbjct 682 GATGGTGTGT-CTCACACTGTGCCTATCTACGAGGGTTTCTCACTTCCACATGCTATCCT 740
Query 697 ACGTCTTGACCTAGCGGGTCGTGACCTCACAGACCACCTCATGAAAATCCTGACAGA-AC 755
||||| ||||| || ||||||||||| || || |||||||||| ||||| || || |
Sbjct 741 CCGTCTCGACCTTGCTGGTCGTGACCTTACTGATTACCTCATGAAGATCCTTACCGAGA- 799
Query 756 GTGGCTAC-TCCTTCACCACAACTGCTGAGCGTGAAATTGTAAGAGACATGAAAGAGAAG 814
| || ||| | ||||||||||| || || || |||||||| |||||||| || ||||||
Sbjct 800 GAGGTTACATG-TTCACCACAACAGCAGAACGGGAAATTGTGAGAGACATCAAGGAGAAG 858
Query 815 CTCTC-TTATATTGCTCTAGACTACGAGCAAGAGCTAGAGACTTCCAAAACAAGCTCGTC 873
|| || || | | ||| | ||||||||||||||| | ||||| || ||||| ||||| ||
Sbjct 859 CTTTCCTT-TGTCGCTGTCGACTACGAGCAAGAGATGGAGACCTCGAAAACCAGCTCCTC 917
Query 874 CGTTGAGAA-AAGCT-TCGAGCTT-CCTGACGGACAAGTGATAACCATTGGAGCAGAGCG 930
| | || || || || | || || || |||||||||||||| || || || || ||| |
Sbjct 918 CATCGAAAAGAA-CTAT-GAA-TTACCCGACGGACAAGTGATCACGATCGGTGCTGAGAG 974
Query 931 GTTTC-GGTGTCCGGAAGTTCTGTTTC-AGCCGTCAAT-GATCGGAATGGAAAATCC-GG 986
|| | |||| || ||||| || |||| |||| ||| | | | ||||||||| | | ||
Sbjct 975 ATT-CAGGTGCCCAGAAGTCCT-TTTCCAGCCATCATTTGTT-GGAATGGAAGCTGCAGG 1031
Query 987 GAATCCATGAAACCACATATAACTCTATCATGAAATGTGATGTGGATATTAGGAAAGAT- 1045
|| |||| || || || || ||||| |||||||| |||||||| ||||| ||||| ||
Sbjct 1032 GA-TCCACGAGACAACTTACAACTCGATCATGAAGTGTGATGTTGATATCAGGAAGGACC 1090
Query 1046 TTGTATGGTAACATTGTGCTAAGTGGTGGAACCACAATGTT-TGGAGGGATTGGTGATAG 1104
|| || |||||||||||||| |||||||| || || ||||| | ||| |||| || |
Sbjct 1091 TT-TACGGTAACATTGTGCTCAGTGGTGGTACAACTATGTTCTC-AGGTATTGCAGACCG 1148
Query 1105 AATGAGCAAAGAAATTACGGCT-TTGGCTCCAAGTAGTATGAAGATTAAGGTCGTGGCTC 1163
||||||||||| || || ||| ||| | || || || |||||||||||||||||||| |
Sbjct 1149 TATGAGCAAAGAGATCACAGCTCTTGCC-CCGAGCAGCATGAAGATTAAGGTCGTGGCAC 1207
Query 1164 CACCGGAGAGGAAGTACAGTGTTTGGATCGGTGGCTCTATA-TTAGCTTCACTCAGCACT 1222
|||| ||||||||||||||||| ||||| ||||| ||||| || ||||| |||||||||
Sbjct 1208 CACCCGAGAGGAAGTACAGTGTCTGGATTGGTGGTTCTATCCTT-GCTTCCCTCAGCACT 1266
Query 1223 TTCCAGCAGATGTGGAT-TGCGAAAGCAGAGTACGATGAATCTGGACCCT-CAATTGTGC 1280
||||||||||||||||| | | || |||||||| |||||| | || || || |||| |
Sbjct 1267 TTCCAGCAGATGTGGATCT-CTAAGGCAGAGTATGATGAAGCAGGTCCAGGCA-TTGTCC 1324
Query 1281 ATAGGAAATGCTTCTAA 1297
| || ||||||||||||
Sbjct 1325 ACAGAAAATGCTTCTAA 1341
> AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:6474842-6477204
FORWARD LENGTH=1756
Length=1756
Score = 789 bits (427), Expect = 0.0
Identities = 923/1159 (80%), Gaps = 48/1159 (4%)
Strand=Plus/Plus
Query 163 AATGGCTGACGG-TGAAGACATTCAACCGCTAGTTTGTGACAATGGAACGGGAATGGTTA 221
||||||||| || ||| || |||||||| | || ||||||||||| || || ||||| |
Sbjct 250 AATGGCTGA-GGCTGATGATATTCAACCAATCGTGTGTGACAATGGTACCGGTATGGTGA 308
Query 222 AGGCTGGATTCGCGGGTGACGATGCGCCAAGAGCGGTTTTTCCAAGCATTGTAGGCCGTC 281
|||||||||| || || || ||||| || || || |||||||| || |||| || | |
Sbjct 309 AGGCTGGATTTGCAGGAGATGATGCTCCCAGGGCTGTTTTTCCCAGTGTTGTTGGTAGGC 368
Query 282 CTCGCCA-CACGGGTGTGATGGTTGGGATGGGA-CAAAAGGATGCTTATGTTGGAGACGA 339
| | || || ||||| ||||||||||| | | || |||||||| |||||||| || ||
Sbjct 369 CAAGACATCA-TGGTGTCATGGTTGGGAT-GAACCAGAAGGATGCATATGTTGGTGATGA 426
Query 340 GGCTCAAT-CAAAACGTGGTATT-TTGA-CTCTCAAATACCCAATTGAGCATGGAATTGT 396
|| |||| ||| | | |||||| || | || | || || || ||||||||||| ||||
Sbjct 427 AGCACAATCCAAGA-GAGGTATTCTT-ACCT-TGAAGTATCCTATTGAGCATGGTGTTGT 483
Query 397 TAATAATTGGGACGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGT 456
|| || ||||| || ||||| ||||| |||||||||||||||||||||||||||||| |
Sbjct 484 TAGCAACTGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAATGAGCTTCGTAT 543
Query 457 GGCACCTGAGGAGCACCCGGTTCT-CTTAACCGAAGCTCCTCTCAATCCGAAAG-CTAAC 514
|| ||||| |||||||| ||||| |||| |||| |||||||| || || |||| | |||
Sbjct 544 TGCTCCTGAAGAGCACCCTGTTCTTCTTA-CCGAGGCTCCTCTTAACCC-AAAGGCCAAC 601
Query 515 CGTGAGAAGATGACTCAAATCATGTTTGAGACATTTAACACTCCTGCTATGTATGTTGCC 574
| ||||||||||||||||||||||||||||| |||||| |||| ||||||||||| |||
Sbjct 602 AGAGAGAAGATGACTCAAATCATGTTTGAGACCTTTAACTCTCCCGCTATGTATGTCGCC 661
Query 575 ATTCAAGCTGTTCTCTCACTC-TATGCCAGTGGCCGTACAACTGGTATTGTTTTGGACTC 633
|| |||||||||||||| || || |||||||| |||||||| |||||||| |||| ||
Sbjct 662 ATCCAAGCTGTTCTCTC-CTTGTACGCCAGTGGTCGTACAACCGGTATTGTGCTGGATTC 720
Query 634 TGGAGATGGTGTGAGC-CACACGGTACCAATCTACGAGGGTTACGCTCTTCCACACGCGA 692
||| ||||||||| | ||||| || |||||||||||||||| | ||||||| || || |
Sbjct 721 TGGTGATGGTGTGT-CTCACACTGTGCCAATCTACGAGGGTTTCTCTCTTCCTCATGCCA 779
Query 693 TCCTACGTCTTGACCTAGCGGGTCGTGACCTCACAGACCACCTCATGAAAATCCTGACAG 752
|||| ||||||||||| || || |||||||| || || |||||||||| ||||| ||||
Sbjct 780 TCCTCCGTCTTGACCTTGCTGGACGTGACCTTACTGATTACCTCATGAAGATCCTTACAG 839
Query 753 A-ACGTGGCTAC-TCCTTCACCACAACTGCTGAGCGTGAAATTGTAAGAGACATGAAAGA 810
| | | || ||| | ||||||||||| || ||||| ||||||||||||||||| || ||
Sbjct 840 AGA-GAGGTTACATG-TTCACCACAACAGCAGAGCGGGAAATTGTAAGAGACATCAAGGA 897
Query 811 GAAGCTCTC-TTATATTGCTCTAGACTACGAGCAAGAGCTAGAGACTTCCAAA-ACAAGC 868
||||||||| || | ||||| | ||||||||||| ||| | || || || ||| || |||
Sbjct 898 GAAGCTCTCCTT-TGTTGCTGTTGACTACGAGCAGGAGATGGAAACCTC-AAAGACCAGC 955
Query 869 TCGTCCGTTGAGAA-AAGCT-TCGAGCTT-CCTGACGGACAAGTGATAACCATTGGAGCA 925
|| ||| | ||||| || || | || || || || || ||||| || || ||||| ||
Sbjct 956 TCTTCCATCGAGAAGAA-CTAT-GAA-TTACCCGATGGGCAAGTCATCACGATTGGTGCT 1012
Query 926 GAGCGGTTTCGG-TGTCCGGAAGTTCT-GTTTCAGCCGTCAAT-GATCGGAATGGAAAAT 982
||| | || | | || || ||||| || ||| ||||| || | | | ||||||||| |
Sbjct 1013 GAGAGATT-CAGATGCCCAGAAGT-CTTGTTCCAGCCCTCGTTTG-TGGGAATGGAAGCT 1069
Query 983 CCGGGAATCCATGAAACCACATATAACTCTATCATGAAATGTGATGTGGATATTAGGAAA 1042
| |||||||| || || || |||||||| |||||||| |||||||||||||| |||||
Sbjct 1070 GCTGGAATCCACGAGACAACCTATAACTCAATCATGAAGTGTGATGTGGATATCAGGAAG 1129
Query 1043 GATTTGTATGGTAACATTGTGCTAAGTGGTGGAACCACAATGTT-TGGAGGGATTGGTGA 1101
||| |||| |||||||||||||| |||||||||||||| ||||| | ||| || | |||
Sbjct 1130 GATCTGTACGGTAACATTGTGCTCAGTGGTGGAACCACTATGTTCTC-AGGTATCGCTGA 1188
Query 1102 TAGAATGAGCAAAGAAATTACGGCT-TTGGCTCCAAGTAGTATGAAGATTAAGGTCGTGG 1160
| |||||||||||||| || || ||| | ||||| || ||||||||||||||||| |
Sbjct 1189 CCGTATGAGCAAAGAAATCACAGCACTTG-CACCAAGCAGCATGAAGATTAAGGTCGTTG 1247
Query 1161 CTCCACCGGAGAGGAAGTACAGTGTTTGGATCGGTGGCTCTATA-TTAGCTTCACTCAGC 1219
| ||||| || |||||||||||||| ||||||||||| || || || ||||| ||||||
Sbjct 1248 CACCACCTGAAAGGAAGTACAGTGTCTGGATCGGTGGTTCCATTCTT-GCTTCCCTCAGC 1306
Query 1220 ACTTTCCAGCAGATGTGGAT-TGCGAAAGCAGAGTACGATGAATCTGGACCCTCAATTGT 1278
|| ||||||||||||||||| | | || || ||||| ||||| | || || ||| ||
Sbjct 1307 ACATTCCAGCAGATGTGGATCTCC-AAGGCCGAGTATGATGAGGCAGGTCCAGGAATCGT 1365
Query 1279 GCATAGGAAATGCTTCTAA 1297
|| || ||||| ||||||
Sbjct 1366 TCACAGAAAATGTTTCTAA 1384
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72087982620
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5