BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496085 Length=1252 Score E Sequences producing significant alignments: (Bits) Value AT5G59520.1 | Symbols: ZIP2 | ZRT/IRT-like protein 2 | chr5:239... 1755 0.0 > AT5G59520.1 | Symbols: ZIP2 | ZRT/IRT-like protein 2 | chr5:23991253-23992798 REVERSE LENGTH=1292 Length=1292 Score = 1755 bits (950), Expect = 0.0 Identities = 1176/1278 (92%), Gaps = 44/1278 (3%) Strand=Plus/Plus Query 1 AAACAAAGAATAACTAAAATGGCTTTGTCTTCCAAAACCCTAAAGTCAActctcttcctc 60 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 19 AAACAAACAATAACTAAAATGGCTTTGTCTTCCAAAACCCTAAAGTCAACTCTCTTCTTC 78 Query 61 ctctctattctcttcctctgtttctcctTGATCCTAGCTCACGGCGGCATAGACGACGGC 120 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 79 CTCTCTATTATTTTCCTCTGTTTCTCCTTGATCCTAGCTCACGGCGGCATAGACGACGGC 138 Query 121 GAC---GAAGAGGAGACCAACCAGCCACCT-------CCGG-----CCACCGTCGTAAAT 165 ||| |||||||||||||||||||||||| |||| |||||||||| ||| Sbjct 139 GACGAAGAAGAGGAGACCAACCAGCCACCTCCGGCCACCGGAACAACCACCGTCGTGAAT 198 Query 166 CTCCGATCGAAAAGCTTGGTGCTTGTGAAGATCTACTGTATTATAATACTCTTCTTTAGC 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 199 CTCCGATCGAAAAGCTTGGTGCTTGTGAAGATCTACTGTATTATAATACTCTTCTTTAGC 258 Query 226 ACATTCGTAGCCGGAATTTCACCTTACTTTTACCGATGGAACGAGTCGTTTCTCCTCCTC 285 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 259 ACATTCTTAGCCGGAGTTTCACCTTACTTTTACCGATGGAACGAGTCGTTTCTCCTCCTC 318 Query 286 GGAACTCAATTCTCCGGCGGTATATTCCTAGCCACCGCTCTAATCCATTTCCTCAGCGAC 345 ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct 319 GGAACTCAATTCTCCGGTGGTATATTCCTCGCGACCGCTCTAATCCATTTCCTCAGCGAC 378 Query 346 GCTAACGAGACATTCAG-GGGATTAAAACACAAAGAGTACCCTTACGCCTTCATGTTAGC 404 ||||||||||| ||| | ||| ||||||||||||||||| |||||||||||||||||||| Sbjct 379 GCTAACGAGACTTTCCGAGGG-TTAAAACACAAAGAGTATCCTTACGCCTTCATGTTAGC 437 Query 405 AGCCGCTGGATATTGCCTTACAATGCTCGCAGATGTGGCGGTTGCGTTCGTAGCAGTTGG 464 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | ||| Sbjct 438 AGCCGCTGGATATTGCCTTACAATGCTGGCAGATGTGGCGGTTGCGTTTGTAGCGGCTGG 497 Query 465 GAGTAGTAACAACCACGGCGGAGCTAGCGTCGTCGGAGAGTCGAGGGTGGATGATGAAGC 524 ||||| ||||||||||| |||||||||||||| | ||||||||||| ||||||||| | Sbjct 498 GAGTAATAACAACCACGTCGGAGCTAGCGTCG--G-AGAGTCGAGGGAGGATGATGACGT 554 Query 525 GGCAGTGAAAGAGGAAGGACGTCGTGAGATAAAGAGTGGTGTGGATGTGAGTCAAGCGCT 584 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 555 GGCAGTGAAAGAGGAAGGACGTCGTGAGATAAAGAGTGGTGTTGATGTGAGTCAAGCGCT 614 Query 585 TATACGAACGAGTGGATTTGGAGACACAGCGTTGCTGATTTTTGCACTTTGTTTTCACTC 644 ||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 615 TATACGAACTAGTGGATTTGGAGACACAGCTTTGCTGATTTTTGCTCTTTGTTTTCACTC 674 Query 645 CATCTTTGAGGGAATCGCCATTGGTCTCTCAGACACTAAAAGCGACTCTTGGAGAAACCT 704 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 675 CATCTTTGAGGGAATCGCCATTGGTCTCTCAGACACTAAAAGCGACGCTTGGAGAAACCT 734 Query 705 ATGGACAATATCGTTGCACAAGGTCTTCGCGGCCGTAGCAATGGGAATAGCTCTCCTCAA 764 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 735 ATGGACAATATCGTTGCACAAGGTCTTTGCGGCCGTAGCAATGGGAATAGCTCTTCTCAA 794 Query 765 GCTAATCCCTAAGCGTCCATTCTTTCTCACTGTCGTCTACTCCTTCGCCTTTGGGATATC 824 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 795 GCTAATCCCTAAACGTCCATTCTTCCTCACTGTCGTCTACTCCTTCGCCTTTGGGATATC 854 Query 825 GAGTCCCATAGGTGTGGGGATTGGCATTGGCATCAATGCCACTAGCCAAGGAGCCGGTGG 884 ||||||||||||||| ||||||||||| || ||||||||||||||||||||||| ||||| Sbjct 855 GAGTCCCATAGGTGTCGGGATTGGCATAGGAATCAATGCCACTAGCCAAGGAGCTGGTGG 914 Query 885 TGACTGGACCTATGCGATCTCTATGGGCCTCGCTTGTGGAGTTTTCGTGTATGTTGCGGT 944 |||||||||||| ||||||||||||||||| || ||||||||||| ||||| |||||||| Sbjct 915 TGACTGGACCTACGCGATCTCTATGGGCCTTGCGTGTGGAGTTTTTGTGTACGTTGCGGT 974 Query 945 TAACCATCTCATCTCGAAAGGGTATAAGCCTCGTGAGGAATGTTACTTCGACAAGCCAAT 1004 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 975 TAACCATCTCATCTCAAAAGGGTATAAGCCTCGTGAGGAATGTTACTTCGACAAGCCAAT 1034 Query 1005 CTACAAGTTTATTGCTGTCTTCCTTGGCGTTGCTATGCTCTCTGTTGTTATGATTTGGGA 1064 ||||||||||||||| |||||||| || |||||| ||||||||||||| ||||||||||| Sbjct 1035 CTACAAGTTTATTGCCGTCTTCCTCGGTGTTGCTTTGCTCTCTGTTGTAATGATTTGGGA 1094 Query 1065 TTGATTTTAAGTGATATA--CTTAGTTTCAATCATTAGttttttttctttttctttCAAA 1122 |||||||| |||||||| |||||||||||| ||||||||||||| | | ||| Sbjct 1095 TTGATTTTTGGTGATATATACTTAGTTTCAATAATTAGTTTTTTTT-TC---C---CAA- 1146 Query 1123 TCTCCTT-GTTCATATTCTTCGTTTCTATTAATTTTGCAGAATTTAACAATTCAATGTAC 1181 || |||| |||||| |||||||||| ||||||||||||||||||| ||||||||||||| Sbjct 1147 TC-CCTTTGTTCATGTTCTTCGTTTTTATTAATTTTGCAGAATTTCACAATTCAATGTA- 1204 Query 1182 GTAAACCGTTGTGAAAAA-GAATATAAACATTTATGTATACGATAT-G-T----GAATGT 1234 | | ||||| ||||| |||| |||||||||||||||||||| | | | |||||| Sbjct 1205 --ACA--GTTGTCAAAAAAGAATGTAAACATTTATGTATACGATGTTGATATATGAATGT 1260 Query 1235 GATGAGGCACCAAGCCAC 1252 |||||| ||||||||||| Sbjct 1261 GATGAGCCACCAAGCCAC 1278 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 61545868170 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5