BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496102
Length=2722
Score E
Sequences producing significant alignments: (Bits) Value
AT5G59700.1 | Symbols: | Protein kinase superfamily protein | ... 3982 0.0
AT3G46290.1 | Symbols: HERK1 | hercules receptor kinase 1 | chr... 1696 0.0
AT5G61350.1 | Symbols: | Protein kinase superfamily protein | ... 202 2e-50
> AT5G59700.1 | Symbols: | Protein kinase superfamily protein
| chr5:24052385-24055425 REVERSE LENGTH=2861
Length=2861
Score = 3982 bits (2156), Expect = 0.0
Identities = 2514/2688 (94%), Gaps = 19/2688 (1%)
Strand=Plus/Plus
Query 1 ACAAAAGCCAACATCTGGAAATCAATCGATCAGCTGATCGTCAACTATTGTACCTTTCAT 60
||||||||||| ||||||| ||||||| ||||||||||| |||||| |||||||||||||
Sbjct 53 ACAAAAGCCAAAATCTGGAGATCAATCTATCAGCTGATCCTCAACTTTTGTACCTTTCAT 112
Query 61 GGAACAATTTAATCTTTGAGGTTTTGTGAAGATGGGTGGTCAAAAGTTTGGATTTTTAAT 120
||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||| ||
Sbjct 113 GGAACAATTTACTCTTTAAGGTTTTGTGAAGATGGGTGGTGAAAAGTTTGGATTTTTGAT 172
Query 121 TTGGATTTCAACGATTTCTTGCTTAATCTGCCTCTGCCATGGATACGTACCTGTGAATAA 180
|||||||| | ||||| |||||||||||| ||||||| ||||||||||||| ||| ||||
Sbjct 173 TTGGATTTTATCGATTCCTTGCTTAATCTTCCTCTGCTATGGATACGTACCAGTGGATAA 232
Query 181 TTACCTCATCAACTGTGGATCATCAACCAACGTCACTGTCACTAGTCGAGTGTTCATCTC 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 233 TTACCTCATCAACTGTGGATCATCAACCAACGTCACTGTCACTAGTCGAGTGTTTATCTC 292
Query 241 TGATAAGCTTGCTTCAAACCTCCTAACCTCTCCTAATGAAATCCTCGCCGCCGCGAGTAA 300
|||||| |||||||||||| | |||||||||||||||||||||||||||| | | |||||
Sbjct 293 TGATAACCTTGCTTCAAACTTTCTAACCTCTCCTAATGAAATCCTCGCCG-C-C-AGTAA 349
Query 301 TCGCAATTCAAATTCAGATATTTACCAGACGGCGAGAATCTTCACCGGAATCTCCAAGTA 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 350 TCGCAATTCAAATTCAGATATTTACCAGACGGCGAGAATCTTCACCGGAATCTCTAAGTA 409
Query 361 CAGATTCTCCATCACTAGAGGCCGCCACTGGGTTCGTCTCCATTTCAATCCTTTTCAGTA 420
|||||||||| | |||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 410 CAGATTCTCCGTTGCTAGAGGCCGTCACTGGATTCGTCTCCATTTCAATCCTTTTCAGTA 469
Query 421 CCAAAACTTCCAATTGGGCTCAGCCAAATTCTCAGTTTCTTCACAAACACATGTCCTCTT 480
||||||||||||| ||| |||||| |||||||| ||||||||| |||||||||| || ||
Sbjct 470 CCAAAACTTCCAAATGGTCTCAGCAAAATTCTCTGTTTCTTCAGAAACACATGTTCTTTT 529
Query 481 GAGTGATTTCACTGTGAATTCCAGAGTTATGAAGGAGTACTCTCTGAATGTAGCTACGGA 540
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 530 GAGTGATTTCACTGTGAGTTCCAGAGTTATGAAGGAATACTCTCTGAATGTAGCTACGGA 589
Query 541 TCATCTCGAGCTCACGTTTACTCCCTCTGGTGATTCGTTTGCGTTTCTGAACGCGCTCGA 600
|||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 590 TCATCTGGAGCTCACGTTTACTCCCTCGGGTGATTCATTTGCGTTTCTGAACGCGCTCGA 649
Query 601 GGTTGTATCGGTTCCTGATACGTTGATCATTGGTGATCCTTCATTTGTAGGCAGTCCCGG 660
|||||| |||||||||||||||||| ||| |||||||||||| |||| ||||||||| ||
Sbjct 650 GGTTGTTTCGGTTCCTGATACGTTGTTCAGTGGTGATCCTTCCTTTGCAGGCAGTCCTGG 709
Query 661 GAAGTTTCAGGGCTTGTCATTGCAAGCTTTTGAGACGGTTTATAGAGTGAACATGGGCGG 720
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 710 GAAGTTTCAGGGCTTGTCATGGCAAGCTCTTGAGACGGTTTATAGAGTGAACATGGGCGG 769
Query 721 TCCGCGTGTTACGCCTAGTAACGATACTCTTTCGAGAATTTGGGAACCTGATTCTGAGTT 780
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 770 TCCGCGTGTTACGCCTAGTAACGATACTCTTTCGAGAATTTGGGAGCCTGATTCTGAGTT 829
Query 781 TATAGTGGAGAAGAATCTAGTTAAGATTGTGTCTAAGATTGCAAGTGTTGATTATGTTCC 840
| |||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 830 TCTAGTTGAGAAGAATCTAGTTAAGAGTGTGTCTAAGATTGCATCTGTTGATTATGTTCC 889
Query 841 CGGTTTTGCTACAGAGGAGACTGCCCCAAGAACTGTCTATGGTACTTGCACCGAGATGAA 900
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 890 TGGTTTTGCTACAGAGGAGACTGCTCCTAGAACTGTCTATGGTACTTGCACCGAGATGAA 949
Query 901 TTCCGCAGATTACCCGACTAGCAAGTTCAATGTGACTTGGGATTTCGATGTTGACCCGGG 960
||| || ||| ||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 950 TTCTGCGGATAACCCGTCTAGCAACTTCAATGTGACTTGGGATTTCGATGTTGACCCGGG 1009
Query 961 TTTTCAGTACTTTCTACGGTTTCATTTCTGCGATATTGTGAGTAAAGCTCTAAACCAGCT 1020
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1010 TTTTCAGTACTTTCTACGGTTTCATTTCTGCGATATCGTGAGTAAAGCTCTAAACCAGCT 1069
Query 1021 TTACTTCAATCTCTATGTCGACTCTAT-GTTGGTTGTTGAGCATCTCGATCTAAGCTCTT 1079
|||||||||||| |||||||||||||| | | ||||||||| |||| ||||| |||||||
Sbjct 1070 TTACTTCAATCTTTATGTCGACTCTATGGAT-GTTGTTGAGAATCTTGATCTGAGCTCTT 1128
Query 1080 ACTTATCCAACACTTTGAGTGGTGCATACTCGATGGATTTTGTCACCGGATCAGCTAAAC 1139
| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||
Sbjct 1129 ATTTATCCAACACTTTGAGTGGTGCATACGCGATGGATTTTGTCACAGGATCAGCAAAAC 1188
Query 1140 AGACTAAAACAATCCGTGTGAGCATCGGTCCATCGGGTGTTCACACTGATTACCCTAATG 1199
|||||||| |||||||||||||||||||| |||| |||||||||| |||||||||| ||
Sbjct 1189 TGACTAAAAGAATCCGTGTGAGCATCGGTCGATCGAGTGTTCACACGGATTACCCTACTG 1248
Query 1200 CGATTCTGAACGGATTAGAGATCATGAAGATGAATAACTCCAAAAGTCAGCTCAGTAACG 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1249 CGATTCTGAACGGATTAGAGATCATGAAGATGAATAACTCCAAAAGTCAGCTCAGTATTG 1308
Query 1260 GGACATTTTTGCCTAGTGGTTCAAGTTCAACCACCAAGAAGAATGTTGGTATGATCGTTG 1319
| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 1309 GAACATTTTTGCCCAGTGGTTCAAGTTCAACCACTAAGAAGAATGTTGGTATGATCATTG 1368
Query 1320 GTGTAACGGTTGGCTCATTGCTTGCTTTAGTGGTTTTAGGAGGTATCTTTTTGCTGTACA 1379
|| ||||| | ||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 1369 GTTTAACGATCGGCTCATTGCTTGCTTTAGTGGTTTTAGGAGGTTTCTTTGTGCTGTACA 1428
Query 1380 AGAAACGAGGACGAGACCCGGATGACCATTCAAAGACTTGGATTCCGTTGTCTTCCAATG 1439
|||||||||||||||||| |||| ||||||||||||||||||| ||||| |||||||
Sbjct 1429 AGAAACGAGGACGAGACCAAGATGGTAATTCAAAGACTTGGATTCCTTTGTCATCCAATG 1488
Query 1440 GAACAACTTCATCCTCAAATGGAACTACAATTGCAAGTAAAGCTTCCAATTCCAGTTATC 1499
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 1489 GAACAACTTCATCCTCAAATGGAACTACACTTGCAAGTATAGCTTCCAATTCCAGTTATC 1548
Query 1500 GAATTCCTTTGGCAGCAGTCAAAGAGGCCACAAATAGCTTTGACGAGAA-CAGAGCAATT 1558
|||||||||||| |||||| ||||||||||||||||||||||| ||||| | ||||||||
Sbjct 1549 GAATTCCTTTGGTAGCAGTTAAAGAGGCCACAAATAGCTTTGATGAGAATC-GAGCAATT 1607
Query 1559 GGCGTTGGTGGTTTTGGTAAAGTGTACAAAGGAGAGCTTCACGACGGTACAAAAGTAGCT 1618
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1608 GGAGTTGGTGGTTTTGGTAAAGTGTACAAAGGAGAGCTTCACGACGGTACAAAAGTAGCT 1667
Query 1619 GTTAAAAGAGCGAATCCTAAGTCTCAGCAAGGACTTGCAGAGTTCAGGACAGAAATCGAA 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1668 GTTAAAAGAGCGAATCCTAAGTCTCAGCAAGGACTTGCAGAGTTCAGGACAGAAATCGAA 1727
Query 1679 ATGCTGTCTCAATTTCGTCACCGCCACTTGGTTTCTCTGATCGGTTACTGCGATGAGAAT 1738
||| |||| ||||| ||||| ||||| ||||||||| ||||||| |||||||| ||||||
Sbjct 1728 ATGTTGTCACAATTCCGTCATCGCCATTTGGTTTCTTTGATCGGATACTGCGACGAGAAT 1787
Query 1739 AACGAGATGATTCTCATTTACGAATATATGGAGAACGGAACATTGAAGAGTCACCTTTAC 1798
|||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1788 AACGAGATGATTCTGGTTTACGAATATATGGAGAATGGAACATTGAAGAGTCACCTTTAC 1847
Query 1799 GGCTCAGATCTTCCTAGCTTAAGTTGGAAGCAACGGCTTGAGATATGCATTGGATCAGCA 1858
|| |||| ||||| |||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1848 GGTTCAGGTCTTCTTAGCTTGAGTTGGAAGCAACGTCTTGAGATATGCATTGGATCAGCA 1907
Query 1859 AGAGGATTGCATTATCTCCATACCGGTGACGCGAAACCCGTGATTCACAGAGACGTGAAA 1918
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1908 AGAGGATTGCATTATCTCCACACCGGTGACGCGAAACCCGTGATTCACAGAGACGTCAAA 1967
Query 1919 TCCGCCAACATATTACTCGACGAGAATCTCATGGCTAAAGTTGCAGACTTTGGACTGTCT 1978
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1968 TCCGCCAACATATTGCTTGACGAGAATCTCATGGCTAAAGTTGCAGACTTTGGACTGTCT 2027
Query 1979 AAGACCGGACCCGAGATCGATCAGACTCATGTGAGTACCGCGGTCAAAGGAAGTTTCGGA 2038
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2028 AAGACCGGACCGGAGATCGATCAGACTCATGTGAGTACCGCGGTCAAAGGAAGTTTCGGA 2087
Query 2039 TATCTTGATCCGGAATACTTCAGAAGACAACAGCTCACAGAGAAATCAGATGTTTACTCT 2098
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2088 TATCTTGATCCAGAATACTTCAGAAGACAACAGCTCACAGAGAAATCAGATGTTTACTCT 2147
Query 2099 TTTGGAGTGGTTATGTTCGAGGTTCTCTGCGCGAGACCGGTTATAGACCCGACACTTAAT 2158
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 2148 TTTGGAGTGGTTATGTTCGAGGTTCTCTGCGCGAGACCTGTTATAGACCCGACACTTACT 2207
Query 2159 AGAGAGATGGTGAATCTAGCGGAATGGGCGATGAAATGGCAGAAGAAAGGACATCTTGAA 2218
||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 2208 AGAGAAATGGTGAATCTAGCGGAATGGGCAATGAAATGGCAGAAGAAAGGACAGCTTGAA 2267
Query 2219 CATATCATTGATCCATCACTGCGAGGTAAAATCAGACCTGATTCGCTAAGAAAGTTTGGT 2278
|| ||||| || || |||||||| ||||| ||||||||||| ||||| |||||||| |||
Sbjct 2268 CACATCATCGACCCGTCACTGCGGGGTAAGATCAGACCTGACTCGCTTAGAAAGTTCGGT 2327
Query 2279 GAAACAGGGGAGAAATGTTTAGCTGATTATGGAGTTGATAGACCATCAATGGGAGATGTG 2338
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 2328 GAAACAGGGGAGAAATGTTTAGCTGACTATGGAGTCGATAGACCATCAATGGGAGATGTG 2387
Query 2339 TTGTGGAATCTTGAATATGCTTTGCAGCTACAAGAAGCAGTCATTGATGGTGATCCAGAA 2398
||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||
Sbjct 2388 TTGTGGAATCTTGAATACGCTTTGCAGCTACAAGAAGCTGTCGTTGATGGTGATCCAGAA 2447
Query 2399 GACAGCACAAACATGATCGGTGAGCTACCTCTACGGTTCAATGATTTTAACCATGGAGAC 2458
|||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 2448 GACAGCACAAACATGATCGGTGAGTTACCTCTACGGTTCAATGATTACAACCATGGAGAC 2507
Query 2459 ACGAGCGTTAACGTTTCTGTAGCTAAAGAGG-A-------A-GAAGA-G--TCGAGTGTT 2506
||||| |||||| |||||||||||||||||| | | ||||| | |||||||||
Sbjct 2508 ACGAGTGTTAACTTTTCTGTAGCTAAAGAGGGACGGTTTGATGAAGAAGAATCGAGTGTT 2567
Query 2507 GATGATAGTTCAGGTGTTTCCATGAGTAAAGTTTTCTCGCAGCTGGTTAAATCTGAGGGA 2566
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 2568 GATGATAGTTCAGGTGTTTCCATGAGTAAAGTTTTCTCGCAGCTGATCAAATCTGAGGGA 2627
Query 2567 CGCTAAAGAGATGATAAATTGGAACCAGAATATAGCATATTTGTTCTCCTCTAGCTTTTC 2626
|| ||||| |||||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct 2628 CGTTAAAGCGATGATAAATTGGAACCAGAATATAGAATCTTTGTTCTGCTCTAGCTTTTC 2687
Query 2627 TTCTGTACATTTTTAACGATTAGACTATGATTTTCATTCAATGACCAA 2674
|||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 2688 TTCTGTACATTTTTTACGATTAGACTATGATTTTCATTCAATAACCAA 2735
> AT3G46290.1 | Symbols: HERK1 | hercules receptor kinase 1 | chr3:17012728-17015885
FORWARD LENGTH=3032
Length=3032
Score = 1696 bits (918), Expect = 0.0
Identities = 2022/2543 (80%), Gaps = 124/2543 (5%)
Strand=Plus/Plus
Query 92 ATGGGTGGTCAAAAGTTTGGATTTTTAAT-TTGGATTTCAACGATTTC-TTGCTTAATCT 149
|||||| | ||||||||| | ||| || || ||||||||||||||| | ||| | |
Sbjct 156 ATGGGTATTGAAAAGTTTGAAACTTTCATCTT-GATTTCAACGATTTCGAT-CTTGCTTT 213
Query 150 GCCTCTGCCATGGATACGTACCTGTGAATAATTACCTCATCAACTGTGGATCATCAACCA 209
| |||||||||||| | ||||||| |||||||| | ||||||||||||||| ||||||
Sbjct 214 GTATCTGCCATGGATTCACACCTGTGGATAATTACTTGATCAACTGTGGATCACCAACCA 273
Query 210 ACGTCACTGTCACT-AGTCGAGT-GTTCATCTCTGATAAGCT-TGCTTCAAACCTCCTAA 266
| | || | | | ||||| | ||| | ||||||||||| | |||| || | || |
Sbjct 274 ATGGAACACT-AATGGGTCGAATCTTTC-TGTCTGATAAGCTCT-CTTCGAAGTTACTTA 330
Query 267 CCTC-TCCTAATGAAATCCTCGCCGCCGCGAGTAATC-GCAATTCAAATTCAGATATTTA 324
| || ||| || || || |||| | || ||| | | || || ||||| |||||
Sbjct 331 CTTCGTCC-AAAGAGATTCTCG-C-AAGC--GTAGGCGGTAACTCTGGCTCAGACATTTA 385
Query 325 CCAGACGGCGAGAATCTTCACCGGAA-TCTCCAAG-TACAGATTCTCCATCACTAGAGGC 382
||| ||||| ||| |||||||| ||| ||| | || |||| |||||| ||||| | ||
Sbjct 386 CCACACGGCAAGAGTCTTCACC-GAAGTCT-CTAGCTACAAATTCTCGGTCACTCGTGGT 443
Query 383 CGCCACTGGGTTCGTCTCCATTTCAATCCTTTTCAGTACCAAAACTTCCAATTGGGCTCA 442
|| || |||||||||||| |||||||||||||| | |||||||||||| || |||| |||
Sbjct 444 CGTCATTGGGTTCGTCTCTATTTCAATCCTTTTGACTACCAAAACTTCAAAATGGGTTCA 503
Query 443 GCCAAATTCTCAGTTTCTTCACAAACACATGTCCTCTTGAGTGATTTCACTG-T--GAAT 499
|| |||||| | ||||||||||||| |||||||| |||||||||||||||| | || |
Sbjct 504 GCTAAATTCGCGGTTTCTTCACAAAGTCATGTCCTTTTGAGTGATTTCACTGTTACGAGT 563
Query 500 TCCAGAGTTATGAAGGAGTACTCTCTGAATGTAG-CTACGGATCATCTCGAGCTCACGTT 558
|| | |||| | || ||||||||| |||| || | |||| || || | | |||||| ||
Sbjct 564 TCAAAAGTTGTCAAAGAGTACTCTTTGAACGT-GACTACTAATGATTTAGTGCTCACCTT 622
Query 559 TACTCCCTCTGGTGATTCGTTTGCGTTTCTGAACGCGCTCGAGGTTGTATCGGTTCCTGA 618
|||||||||| ||| ||||||||||||| |||| || |||||||| ||||| |||| ||
Sbjct 623 TACTCCCTCTAGTGGTTCGTTTGCGTTTGTGAATGCTATCGAGGTTATATCGATTCCAGA 682
Query 619 TACGTTGATCATTGGTGA-TCCTTCATTTGTAGGCAGTCCC-GGGAAGTTTCAGGGCT-T 675
||| ||||| | |||| | ||| |||||||||| ||| | | |||||| || | |
Sbjct 683 TACTTTGATTACTGGT-AGTCCAAGGTTTGTAGGCA-ACCCTGCGCAGTTTC-CGGATAT 739
Query 676 GTCATTGCAAGCTTTTGAGACGGTTTATAGAGTGAACATGGGCGGTCCGCGTGTTACGCC 735
|||| |||||| | |||| || || ||||||| |||||||| ||||||| |||| || |
Sbjct 740 GTCAATGCAAGGTCTTGAAACCATTCATAGAGTCAACATGGGTGGTCCGCTTGTTGCGTC 799
Query 736 TAGTAACGATACTCTT-TCGAGAATTTGGGAACCTGATTCTGAGTTTATAG-TGGAGAAG 793
|| |||||||| || |||||| ||||| ||||| || |||||| | | | ||||||
Sbjct 800 TAACAACGATAC-GTTAACGAGAACTTGGGTGCCTGACTCGGAGTTTCT-GCTTGAGAAG 857
Query 794 AATCTAGTTAAGATTGTGTCTAAGATTGCAAGTGTTGA-TTATGTTCCCGGTTTTGCTAC 852
||| ||| ||||| | |||||||| || ||| |||| | || |||||| |||| ||| ||
Sbjct 858 AATTTAGCTAAGAGTATGTCTAAGTTTTCAACTGTTAACTT-TGTTCCAGGTTATGCAAC 916
Query 853 AGAGGAGACTGCCCCAAGAACTGTCTATGGTACTTGCACCGAGATGAATTCCGCAGATTA 912
|||||| |||| ||||||||||||||||||| ||| || |||||||||||||| ||| |
Sbjct 917 AGAGGACTCTGCTCCAAGAACTGTCTATGGTAGTTGTACTGAGATGAATTCCGCTGATAA 976
Query 913 CCCGACTAGCAAGTTCAATGTGACTTGGGATTTCGATGTTGACCCGGGTTTTCAGTACT- 971
||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 977 CCCGAATAGCATTTTCAATGTGACTTGGGAGTTCGATGTTGACCCGGGTTTTCAGTACTA 1036
Query 972 TTCTACGGTTTCATTTCTGCGATATTGTGAGTAAAGCTC--TAAACCAGCTTTACTTCAA 1029
|| | || ||||||||||||||||| || || | || |||||||||| || |||||
Sbjct 1037 TT-TCCGCTTTCATTTCTGCGATATCGTTAG-CTTG-TCGTTAAACCAGCTATATTTCAA 1093
Query 1030 TCTCTATGTCGACTCTAT-GTTGGTTGTTGA-GCATCTCGATCTAAG--CTCTTACT-TA 1084
||| ||||| ||||| || ||| | || | | | || | ||||| || ||||| | |
Sbjct 1094 TCTTTATGTTGACTCAATGGTT-GCTGCT-ACGGATATTGATCTTAGCACTCTT-GTGGA 1150
Query 1085 TCCAACACTTTGAG-TGGTGCATACTCGATGGATTTTGTCAC-CGGATCAGCTAAACAG- 1141
| ||||||||| | ||||||||| |||||||| |||||||| | || | || ||| |
Sbjct 1151 T--AACACTTTG-GCTGGTGCATATTCGATGGACTTTGTCACGCAGA-C-GCCAAAGGGT 1205
Query 1142 ACTAA-AACAATCCGTGTGAGCATCGGTCCATCGGGTGTTCACACTGATTACCCTAATGC 1200
| ||| || | ||||||||||||||||||| ||| ||||||||| ||||| || || ||
Sbjct 1206 AGTAATAA-AGTCCGTGTGAGCATCGGTCCGTCGACTGTTCACACCGATTATCCAAACGC 1264
Query 1201 GATTCTGAACGGATTAGAGATCATGAAGATGAATAACTCCAAAAGTCAGCTCAGTAAC-G 1259
|||| |||| ||||| ||||| ||||||||||||||||| || ||||| | || || |
Sbjct 1265 GATTGTGAATGGATTGGAGATTATGAAGATGAATAACTCTAAGGGTCAGTTAAG-CACTG 1323
Query 1260 GGACATTTTTGCCTAGTGGTTCAAGTTCAACCACCAAGAAG-AATGT-TGGTATGATCGT 1317
|||||||| ||||| || | | ||||||| || ||| || ||| | ||| |||| ||
Sbjct 1324 GGACATTTGTGCCTGGTAG-T--AGTTCAAGCAGTAAG-AGTAATCTCGGGT-TGATTGT 1378
Query 1318 TGGTGT-AACGGTTGGCTCATTGCTTGCTTTAGTGGTT-TTAGGAGGTAT-CTTTTTGCT 1374
||| | | | |||| || ||||| || |||| || || ||| || | |||| || |
Sbjct 1379 AGGT-TCAGCCATTGGTTCGTTGCTCGCGGTAGT-CTTCTTGGGAAGT-TGCTTTGTGTT 1435
Query 1375 GTACAAGAAAC-GAGGACGAGACCCGGATGACCATTCAAAGACTTGGATTCCGTTGTC-T 1432
||| ||||| | || ||| | || || | ||||||||||||||||| ||||| ||
Sbjct 1436 GTATAAGAAGCGGA-AACGTGGCCAAGACGGTCATTCAAAGACTTGGATGCCGTTTTCGA 1494
Query 1433 TCCAATGGAACAAC--T-----TC--ATCCTCAAATGGAACTACAATTGCAAGTA-AAGC 1482
| |||||||| | | | || ||| ||||||||||| || |||||| || |
Sbjct 1495 T-AAATGGAACTTCGATGGGAAGCAAATACTCCAATGGAACTACGCTTACAAGTATAA-C 1552
Query 1483 TTCCAATTCCAGTTATCGAATT-CCTTTGGCAGCAGTCAAAGAGGCCACAAATAGCTTTG 1541
| ||||| ||| ||| || ||| ||||| ||||| || ||||| || ||||||| |||||
Sbjct 1553 TACCAATGCCAATTACCGTATTCCCTTT-GCAGCGGTTAAAGACGCTACAAATAACTTTG 1611
Query 1542 ACGAGAACAG-AGCAATTGGCGTTGGTGGTTTTGGTAAAGTGTACAAAGGAGAGCTTCAC 1600
|||||| | | | | || || || || |||||||||||||| ||||||||||||||| |
Sbjct 1612 ACGAGAGCCGCAAC-ATCGGTGTAGGCGGTTTTGGTAAAGTCTACAAAGGAGAGCTTAAT 1670
Query 1601 GACGGTACAAAAGTAGCTGTTAAAAGAGCGAATCCTAAGTCTCAGCAAGGACTTGCAGAG 1660
||||||||||| |||||||| ||||||| ||| || || ||||||||||| ||||| ||
Sbjct 1671 GACGGTACAAAGGTAGCTGTGAAAAGAGGGAACCCAAAATCTCAGCAAGGGCTTGCGGAA 1730
Query 1661 TTCAGGACAGAAATCGAAATGCTGTCTCAATTTCGTCACCGCCACTTGGTTTCTCTGATC 1720
||||||||||||||||| ||| | ||||| |||||||||||||| |||||||||||||||
Sbjct 1731 TTCAGGACAGAAATCGAGATGTTATCTCAGTTTCGTCACCGCCATTTGGTTTCTCTGATC 1790
Query 1721 GGTTACTGCGATGAGAATAACGAGATGATTCTCATTTACGAATATATGGAGAACGGAACA 1780
||||| || || ||||| || |||||||| || |||||||| ||||||||||| |||||
Sbjct 1791 GGTTATTGTGACGAGAACAATGAGATGATACTAATTTACGAGTATATGGAGAATGGAACG 1850
Query 1781 TTGAAGAGTCACCTTTACGGCTCAGATCTTCCTAGCTTAAGTTGGAAGCAACGGCTTGAG 1840
| |||||||| ||||| ||||||| ||| |||||||| | |||||| ||||||||||||
Sbjct 1851 GTAAAGAGTCATCTTTATGGCTCAGGTCTACCTAGCTTGACTTGGAAACAACGGCTTGAG 1910
Query 1841 ATATGCATTGGAT-CAGCAAGAGGATTGCATTATCTCCATACCGGTGACGCGAAACCCGT 1899
|| |||||||| | |||| ||||| |||||||| || || || |||||| ||||||| ||
Sbjct 1911 ATCTGCATTGG-TGCAGCTAGAGGCTTGCATTACCTTCACACGGGTGACTCGAAACCGGT 1969
Query 1900 GATTCACAGAGACGTGAAATCCGCCAACATATTACTCGACGAGAATC-TCATGGCTAAAG 1958
|||||||||||||||||||| || |||||||| || |||||||| | ||||||||||||
Sbjct 1970 CATTCACAGAGACGTGAAATCTGCAAACATATTGCTTGACGAGAA-CTTCATGGCTAAAG 2028
Query 1959 TTGCAGACTTTGGACTGTCTAAGACCGGACCCGAGATCGATCAGACTCATGTGAGTACCG 2018
||||||||||||||||||| ||||| ||||||||| | |||||||||||||| ||||| |
Sbjct 2029 TTGCAGACTTTGGACTGTCCAAGACTGGACCCGAGCTTGATCAGACTCATGTAAGTACTG 2088
Query 2019 CGGTCAAAGGAAGTTTCGGATATCTTGATCCGGAATACTTCAGAAGACAACAGCTCACAG 2078
| |||||||||||||| || |||||||| || || ||||||||||| |||||||||||||
Sbjct 2089 CTGTCAAAGGAAGTTTTGGTTATCTTGACCCCGAGTACTTCAGAAGGCAACAGCTCACAG 2148
Query 2079 AGAAATCAGATGTTTACTCTTTTGGAGTGGTTATGTTCGAGGTTCTCTGCGCGAGACCGG 2138
| ||||| |||||||| || || ||||| ||| | ||||||||| | || || ||||| |
Sbjct 2149 ATAAATCCGATGTTTATTCCTTCGGAGTTGTTCTCTTCGAGGTTTTATGTGCTAGACCTG 2208
Query 2139 TTATAGACCCGACACTTA-ATAGAGAGATGGTGAATCTAGCGGAATGGGCGATGAAATGG 2197
|||||||||| |||||| | ||||||||||||||||| || |||||||| |||||||||
Sbjct 2209 TTATAGACCCAACACTTCCA-AGAGAGATGGTGAATCTTGCAGAATGGGCTATGAAATGG 2267
Query 2198 CAGAAGAAAGGACATCTTGAACATATCATTGATCCA-TCACTGCGAGGTAAA-ATCAGAC 2255
||||||||||| || || || || ||||| || ||| || || || || ||| |||||||
Sbjct 2268 CAGAAGAAAGGGCAACTGGATCAGATCATCGA-CCAGTCGCTTCGCGG-AAATATCAGAC 2325
Query 2256 CTGATTCGCTAAG-AAAGTTTG-GTGAAACAGGGGAGAAATGTTTAGCTGATTATGGAGT 2313
| |||||| |||| ||| |||| | |||||||| |||||||||||||| |||||||||||
Sbjct 2326 CCGATTCGTTAAGGAAA-TTTGCG-GAAACAGGTGAGAAATGTTTAGCGGATTATGGAGT 2383
Query 2314 TGATAGACCATCAATGGGAGATGTGTTGTGGAATCTTGAATATGCTTTGCAGCTACAAGA 2373
|||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||
Sbjct 2384 TGATAGGCCATCTATGGGAGATGTGTTGTGGAATCTTGAATACGCTCTGCAGCTTCAAGA 2443
Query 2374 AGCAGTCATTGATGGTGATCCAGAAGACA---GCACAAACATGATCGGTGAGCTACCTCT 2430
|||||||||||||||||| |||||||| | |||| || ||||| ||||| ||||||
Sbjct 2444 AGCAGTCATTGATGGTGAACCAGAAGATAATAGCACGAATATGATTGGTGAATTACCTCC 2503
Query 2431 ACGGTTCAATGATTTTAACCATGGAGACACGAGCGTTAACGTTTCTGTAGCTAAAGAGGA 2490
| | ||||| |||| | || |||||||| || ||||||||| | | || | || ||
Sbjct 2504 GCAGATCAATAATTTCAGTCAGGGAGACACTAGTGTTAACGTTCCGG--GC-ACAGCGGG 2560
Query 2491 A-GAA--GAG---TCGAGTGTTGATGATAGT-TCAGGTGTTTCCATGAGTAAAGTTTTCT 2543
|| ||| || ||| |||||||| | || || ||||||||||||||||| ||||
Sbjct 2561 GCGATTCGAGGAATCTAGTATTGATGATC-TCTCTGGCGTTTCCATGAGTAAAGTATTCT 2619
Query 2544 CGCAGCTGGTTAAATCTGAGGGA 2566
| || ||||| |||||||| |||
Sbjct 2620 CACAACTGGTGAAATCTGAAGGA 2642
> AT5G61350.1 | Symbols: | Protein kinase superfamily protein
| chr5:24667973-24670501 FORWARD LENGTH=2529
Length=2529
Score = 202 bits (109), Expect = 2e-50
Identities = 428/576 (74%), Gaps = 45/576 (8%)
Strand=Plus/Plus
Query 1823 TGGAAGCAACGGCTTGAGATATGCATTGGATCAGCAAGAGGATTGCATTATCTCCATACC 1882
||||||||||| || ||||| |||||||||||||| | ||| | || |||||||| ||
Sbjct 1876 TGGAAGCAACGTCTAGAGATCTGCATTGGATCAGCGCGTGGACTCCACTATCTCCACACG 1935
Query 1883 GGTGAC-GCGAAACCCG-TGATTCACAGAGACGTGAA-ATCCGCCAACATATTAC-TCGA 1938
|||| | ||| | | | || ||| | ||||| || | || ||||||| | | | ||
Sbjct 1936 GGTG-CAGCG-CAGGGGATCATCCACCGCGACGTCAAGA-CCACCAACATCCT-CTTGGA 1991
Query 1939 CGAGAATCTCA-TGGCTAAAGTTGCAGACTTTGGACTGTCTAAGACCGGACCCG-AGATC 1996
|||||| || | | ||||||||| | || |||||||| || || | || || ||
Sbjct 1992 CGAGAACCT-AGTCGCTAAAGTTTCTGATTTTGGACTTTC-AA-A--AGATGCGCCTATG 2046
Query 1997 GAT-CAGACTCATGTGAGTACCGCGGTCAAA-GGAAGTTTCGGATATCTT-GATCCGGAA 2053
||| || ||||| ||||||||||| ||| || |||||||| ||| || || || |||
Sbjct 2047 GATGAAG-GGCATGTAAGTACCGCGGT-AAAGGGTAGTTTCGGGTAT-TTAGACCCCGAA 2103
Query 2054 TACTTCAGAAGACAACAGCTCACAGAGAAATCAGATGTTTACTCTTTTGGAGTGGT-TAT 2112
|||||| | |||||||| ||||| || ||||| ||||||||||| || || ||||| | |
Sbjct 2104 TACTTCCGCAGACAACAACTCACTGATAAATCCGATGTTTACTCATTCGGTGTGGTGT-T 2162
Query 2113 GTTCGAGGTTCTCTGCGCGAGACCGGTTATAGACCCGACACTTA-ATAGAG-AGATGGTG 2170
||||||||||| |||||||| || || ||| |||| ||| ||| ||||| | | ||
Sbjct 2163 ATTCGAGGTTCTTTGCGCGAGGCCAGTGATAAACCC-ACAGTTACCTAGAGAACA-AGTT 2220
Query 2171 AATC-TAGCGGAATGGGCGATGAAATGGCAGAAG-AAAGGACATCTT-GA-ACATATCAT 2226
|| | |||| |||| || ||||| | ||| || ||||| || || || | | |||||
Sbjct 2221 AA-CTTAGCAGAATATGCTATGAATTTGCA-TAGAAAAGG-TATGTTGGAGA-AAATCAT 2276
Query 2227 TGATCC-ATCACTGCGAGGTAA-AATCAG-ACCTGATTCGCTAA-GAAAGTTTGGT-GAA 2281
|| || | | | || || || || || | || ||| ||| |||| || || ||
Sbjct 2277 CGACCCGA-AAAT-CGTGGGAACGATTAGTAAAGGA-TCGTTAAGGAAA--TTCGTGGAG 2331
Query 2282 ACAGGGGAGAAATGTTTAGCTGATTATGGAGTTGATAGACCATCAATGGGAGATGTGTTG 2341
| | || |||||||| || || || || |||||| |||| ||||||||||||||||
Sbjct 2332 GCTGCAGAAAAATGTTTGGCAGAGTACGGTGTTGATCGACCGGGAATGGGAGATGTGTTG 2391
Query 2342 TGGAATCTTGAATATGCTTTGCAGCTACAAGAAGCA 2377
|||||||||||||||||||||||||| |||||||||
Sbjct 2392 TGGAATCTTGAATATGCTTTGCAGCTTCAAGAAGCA 2427
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135199911385
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5