BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496147 Length=1224 Score E Sequences producing significant alignments: (Bits) Value AT5G60090.1 | Symbols: | Protein kinase superfamily protein | ... 1535 0.0 > AT5G60090.1 | Symbols: | Protein kinase superfamily protein | chr5:24196082-24197725 REVERSE LENGTH=1197 Length=1197 Score = 1535 bits (831), Expect = 0.0 Identities = 1088/1210 (90%), Gaps = 25/1210 (2%) Strand=Plus/Plus Query 1 ATGAAACGTTTCTTTTGCTGTCTCAAAGGAGGAAGCTCACGTAACGCAGGGCAAGGTAAC 60 |||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 1 ATGAAACGTTTCTTATGCTGTCTCAAAGGAGGAAGCTCAAGTAACGCAGCGCAAGGTAAC 60 Query 61 GACGAGAACGACGAAGTAAACCTCGACCGACC-ATTTGGGAATAACGAGCGCCTCAATCA 119 |||||||||||||||||| | |||| || || ||||||||||||||||||||||||||| Sbjct 61 GACGAGAACGACGAAGTAGATGTCGAGCG-CCTATTTGGGAATAACGAGCGCCTCAATCA 119 Query 120 TCTTTGGAGAAATCATCTCTC-ACTTCCTGACGATCGTGAAGTTGCAGATCCCACTGCTC 178 ||||||||||||||||||| | ||| |||||||||||||||||||||||||| |||||| Sbjct 120 TCTTTGGAGAAATCATCTC-CGACTCCCTGACGATCGTGAAGTTGCAGATCCGACTGCT- 177 Query 179 G-TTTTTTCCCTA-TATCTCCACCTCTACCTGATAATTGTGGAGCATCATTTCTATGGCG 236 | | | || || | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 178 GCTCTGTTACC-AGTATCTCCACCTCTACCTGATAATTGTGGAGAATCATTTCTATGGCG 236 Query 237 CGAACTCGTAGACGGAACAATAAACTTCCGGGACGAATATTT-TCTCGGCAGAGGCAACT 295 || |||||| ||||||| ||||||||||||||||||| ||| |||||||| |||||||| Sbjct 237 TGAGCTCGTAAACGGAACCATAAACTTCCGGGACGAAT-TTTATCTCGGCAAAGGCAACT 295 Query 296 TCGGCGAAGTCTATCGCTGCCGTTTCTCAAGACTTAATGAGGATGGAGCCGTAAAGATTC 355 ||||||||||| |||||||| ||||||||||||||||| ||||||||| |||||| ||| Sbjct 296 TCGGCGAAGTCCATCGCTGCTATTTCTCAAGACTTAATGTGGATGGAGCGGTAAAGGTTC 355 Query 356 AAAAACCAGACAATCCAACTGGTCATGTTGAGTTCTTGGCAGAGGTTACAACGTTACATG 415 |||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 356 AAAATCCACAGAATCCAACTGGTCATGTTGAGTTCTTGGCAGAGGTTACAACGTTACGTG 415 Query 416 CAGCTAATCACCCAAATGTGATTAGACTTCTTGGCCATTGTTACGGCCAAAGGAACCGTG 475 || ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 416 CAACTAATCATCCAAATGTGATTAGACTTCTTGGCAACTGTTACGGCCAAAGGAACCGTG 475 Query 476 CTATAGTCTACGAATTCATGCCCAATGGCTG-TCTTGAGCGTCACATCTTTGCACACGCA 534 ||||| | |||||||||||| |||| || | ||||||||||||||||||||||||| | Sbjct 476 CTATAATTTACGAATTCATGGCCAACGGA-GATCTTGAGCGTCACATCTTTGCACACAAA 534 Query 535 ACGAGGGTGCAGGGTCCGTTTCCTCAGGGTCTA-CAACTACCAATTAGGGTTTTGAATTG 593 |||| |||| |||||||| ||| |||||||| || |||||||||||||||||| |||| Sbjct 535 ACGATGGTGGAGGGTCCGCGACCTAAGGGTCTAACA-CTACCAATTAGGGTTTTGGATTG 593 Query 594 GGATACGAGGATGAGAATTGCTTTGGGTGTAGCCAAGGGTCTGGTTTATCTACACCAGGA 653 | | |||||||||| ||||||| |||||||||||||||| ||||||||||||||| |||| Sbjct 594 GTACACGAGGATGAAAATTGCTGTGGGTGTAGCCAAGGGCCTGGTTTATCTACACGAGGA 653 Query 654 GCTGAAAGTGATTAACCGAGATGTCAAGGCCGGAAATAT-TCTACTTGATGCAAATTTTG 712 |||||||||||||||| ||||||||||||||||||| || | ||||||||||| |||||| Sbjct 654 GCTGAAAGTGATTAACAGAGATGTCAAGGCCGGAAACATAT-TACTTGATGCAGATTTTG 712 Query 713 TGCCAAAGCTGACTGATTTTGGATTGGCGACTAAAATCGATGTAGATGAAAACGGTGTTG 772 | || |||||||| ||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 713 TTCCGAAGCTGACAGATTTTGGATTGGCGACTAAAATCGTTGAAGATGAAAACGGTGTTG 772 Query 773 AGAAGCAG-ATCCTGATCAATCCGATGAAGGGATCTTTGGGATACATTGCACCGGAAGGA 831 || ||||| | | ||||| ||||||||||| |||| ||||||||||||||||||||||| Sbjct 773 AGCAGCAGCAACG-GATCATTCCGATGAAGGCATCTATGGGATACATTGCACCGGAAGGA 831 Query 832 GAGATTTCCGGGTTTGTTTCGACTAAGACTGATGTCTATAGCTATGGAGCTCTTCTGTTA 891 ||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 832 GAGATTTCCTGGTTGGTTTCGACTAAGACTGATGTCTATAGCTATGGAGCTTTTCTGTTA 891 Query 892 GTGCTTTTCACCGGAAGGCAGCCTTTTTATGT-GAAGAAACCTGTTGGGATTAGGGAGAA 950 |||||||||||||||||| | ||||||||| | | | || |||| ||||| | |||| Sbjct 892 GTGCTTTTCACCGGAAGGAAACCTTTTTAT-TCGGATAATCCTGCTGGGAAAA---AGAA 947 Query 951 TCTCACTGAATGGTTTATCAGAATATTGCCTAG-ACTCGAGGATGCGCCTGTGAAAGTTG 1009 ||||||||| |||||| | ||| ||| | ||| | ||||||||||||||||||||| || Sbjct 948 TCTCACTGATTGGTTTTTGAGAGTATGGGATAGGA-TCGAGGATGCGCCTGTGAAAGCTG 1006 Query 1010 ATGTTGCGCTCGGTTATAGGTATTCGGTTGAAGGTTTAAAGAAGATATTTGATACTGCGA 1069 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1007 ATGTTGCGCTCGGTAATAGGTACTCGGTTGAAGGTTTAAAGAAGATATTTGATACTGCGA 1066 Query 1070 GGATGTGTTTAAAGACAGAGCGACTTGAACGGCCTACTATGAGTGATGTGGAAGCAATGG 1129 |||||||| ||||| ||||| |||||||||||||||| |||||||| |||||||| |||| Sbjct 1067 GGATGTGTATAAAGGCAGAGAGACTTGAACGGCCTACCATGAGTGAAGTGGAAGCGATGG 1126 Query 1130 TTCTCGAAGCTGCATCTTTCCCGGTCCAAGTGCCGCCCCAGGTGAAAAGGAGGCGTTCGG 1189 |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 1127 TTCTCGAAGCTGCAGCTTTCCCGGTCCAAGTGCCGCGCCAGGTGACAAGGAGGCGTTCGG 1186 Query 1190 CTTCGACATA 1199 |||| ||||| Sbjct 1187 CTTCAACATA 1196 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60140252910 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5