BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496171 Length=1041 Score E Sequences producing significant alignments: (Bits) Value AT5G60335.1 | Symbols: | Thioesterase superfamily protein | ch... 782 0.0 AT5G60340.1 | Symbols: | P-loop containing nucleoside triphosp... 472 4e-132 > AT5G60335.1 | Symbols: | Thioesterase superfamily protein | chr5:24273879-24274551 REVERSE LENGTH=501 Length=501 Score = 782 bits (423), Expect = 0.0 Identities = 455/471 (97%), Gaps = 0/471 (0%) Strand=Plus/Plus Query 555 GACAGTTTTCCCTACAGGTCTCCTTGTTTTGAGGAGCTTCTCATCAGTTGCTTCAAAGAC 614 |||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||| Sbjct 12 GACAGTTTTCCCTAGAGGTCTCCTTGTTTTGAGAAGTTTCTCATCAGTTGCTTCAAAGAC 71 Query 615 ACTACTTAAAGTGGGAGATGTTTTAAGAGAAACAAGAGTGTTCTCAAGTGAAGATGTTAA 674 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 72 ACTACTTAAAGTGGGAGATGTTTTAAGAGAAACAAGAGTGTTCTCAAGTGAAGATATTAA 131 Query 675 GGCCTATGCTGAGGTGAGCCATGATTGGAACCCACTCCATTTCGATCCAGAATCTGCTCG 734 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 132 GGCCTATGCTGAGGTGAGCCATGATTGGAACCCACTCCATTTCGATCCAGAATCTGCTCG 191 Query 735 TAAAGCCGGATTTGAGAATCGCCTTGTCCACGGCATGCTTGTTTCTTCCATGTTTCCTCG 794 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 192 TAAAGCCGGATTTGAGAATCGCCTTGTCCACGGGATGCTTGTTTCTTCCATGTTTCCTCG 251 Query 795 TATCATCTCTGCCCAATTCCCTGGAGCAGTATATGTATCTCAAAGTCTGCATTTTCGGTC 854 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 252 TATCATCTCTGCCCATTTCCCTGGAGCAGTATACGTATCTCAAAGTCTGCATTTTCGGTC 311 Query 855 ACCGGTTTACGTAGGTGATGAAATTCTCGGACTAGTTCAAGCAATAGCTTTAAGAGAAAC 914 |||||||||| |||||||||||||||| ||| | |||||||| ||||||||||||||||| Sbjct 312 ACCGGTTTACATAGGTGATGAAATTCTTGGATTGGTTCAAGCCATAGCTTTAAGAGAAAC 371 Query 915 CAAGAATAAGTACATTGTCAAATTCTCAACTAAATGCCTCGAGAACCACAACGAACTTGT 974 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct 372 CAAGAATAAGTACATTGTCAAATTCTCAACTAAATGCTTCAAGAACCACAACGAACTTGT 431 Query 975 TGTTATTGATGGTGAAGCTACTGCAGTTTTACCAAACCTTGAGATGTTGCA 1025 ||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 432 TGTTATTGATGGTGAAGCTACTGCAATTTTACCAAACCTTGACATGTTGCA 482 > AT5G60340.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:24274962-24276055 REVERSE LENGTH=837 Length=837 Score = 472 bits (255), Expect = 4e-132 Identities = 425/500 (85%), Gaps = 40/500 (8%) Strand=Plus/Plus Query 1 ATGGCGAGAGGTAACAAT--GG-CACAACGCGTCCAAA-GCCAAACCTATTGATCACGGG 56 ||||||||| ||||| | || |||| ||| | ||| ||| |||||| |||||||||| Sbjct 165 ATGGCGAGACGTAACCGTGGGGTGACAAGGCG-CGAAAGGCCGAACCTACTGATCACGGG 223 Query 57 GACTCCCGGTACCGGTAAATCGACGACGGCTTCTGCTCTGGCCGAAGCCACGAATCTCCG 116 |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 224 GACTCCTGGTACCGGCAAATCGACGACGGCTTCTGCTCTAGCCGAAGCCACGAATCTCCG 283 Query 117 GTATATTTGTGTCGGTGATCTGGTCAAAGAGAAA-AACTTGC-ACGATGGCTGGGACAAT 174 ||||||||| |||| |||||||||||||||||| || || | || |||||||||||||| Sbjct 284 GTATATTTGCATCGGAGATCTGGTCAAAGAGAAAGAA-TT-CTACCATGGCTGGGACAAT 341 Query 175 CAGTTCGAGTGTCACATCATCAACGAAGACTTGGTG-TGTGATGAGCTTGAAGATGTTAT 233 || ||||||||||| ||||||||||||||| |||| | |||||||||||| |||| ||| Sbjct 342 GAGCTCGAGTGTCACTTCATCAACGAAGACTCGGTGAT-TGATGAGCTTGACGATGCTAT 400 Query 234 GGTAGAAGGAGGAAACATTGTGGACTACCATGGCTGTGACTTCTTTCCTCAGCGATGGTT 293 | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 401 GATAGAAGGAGGGAACATTGTGGACTACCATGGCTGTGACTTCTTTCCTCAGCGATGGTT 460 Query 294 TGATCGCGTTGTGGTGCTTCGAACCGAGAACTCCATTTTTTGTTTTGTAACTTTAGCAGG 353 |||||||||||| ||||||||||||||||||||| |||||||| | | | Sbjct 461 TGATCGCGTTGTCGTGCTTCGAACCGAGAACTCC-------GTTTTGTA--TG-A-C--- 506 Query 354 TTCTGATTGTGTTCTCAACCAA-AGCAGGGGTTATTCGGGAACCAAGCTTAGTAACAACC 412 | | || | ||| || || ||| |||||| |||||||||||||||||||||| Sbjct 507 --C-G-TT-T------AACGAATAG--GGG-TTATTCAGGAACCAAGCTTAGTAACAACC 552 Query 413 TTGAATGTGAATTGTATCAAATCCTACTCGAAGAAGCATGTGACAGTTATGAAGAGGAAA 472 || |||| ||| |||||||| ||||||||||||||||| |||||||||||| ||||||| Sbjct 553 TTCAATGCGAAATGTATCAAGTCCTACTCGAAGAAGCACATGACAGTTATGATGAGGAAA 612 Query 473 TTGTCACTGCACTACAAAGT 492 ||||||||| |||||||||| Sbjct 613 TTGTCACTGAACTACAAAGT 632 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51037893352 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5