BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496285
Length=1431
Score E
Sequences producing significant alignments: (Bits) Value
AT5G61290.1 | Symbols: | Flavin-binding monooxygenase family p... 2063 0.0
AT5G07800.1 | Symbols: | Flavin-binding monooxygenase family p... 1013 0.0
> AT5G61290.1 | Symbols: | Flavin-binding monooxygenase family
protein | chr5:24648558-24650815 FORWARD LENGTH=1595
Length=1595
Score = 2063 bits (1117), Expect = 0.0
Identities = 1309/1400 (94%), Gaps = 19/1400 (1%)
Strand=Plus/Plus
Query 1 AAAATGGTGTTAGTGATAACAGAGCCAATTAAGAGTCAATCAAAGACGGTATGTGTGATA 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 39 AAAATGGTGTTAGTGATTACAGAGCCAATTAAGAGTCAATCAAAGACGGTATGTGTGATA 98
Query 61 GGAGCAGGACCATCCGGGTTAGTGTCGGCGCGAGAGCTAAAGAAAGAAGGACATAAAGTG 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 99 GGAGCAGGACCATCAGGGTTAGTGTCGGCGCGAGAGCTAAAGAAAGAAGGACATAAAGTG 158
Query 121 GTGGTGATGGAGCAAAACAACGACGTAGGAGGTCAGTGGCTATACCAACCAAACGTAGAA 180
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 159 GTGGTGATGGAGCAAAACCACGACGTAGGAGGTCAGTGGTTATACCAACCAAACGTAGAT 218
Query 181 GAAGAAGATACATTGGGAAAAACCAAAATCCTAAAAGTACATAGCAGTGTTTACTCATCC 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 219 GAAGAAGATACATTGGGAAAAACCAAAACCCTAAAAGTACATAGCAGTGTTTACTCATCC 278
Query 241 TTGAGGTTGGCTTCGCCGAGAGAGGTAATGGGTTTCTCTGATTTTCCGTTCACCGCGAAG 300
|||||||| ||||| || |||||||||||||||||||||||||| || |||| |||||||
Sbjct 279 TTGAGGTTAGCTTCACCCAGAGAGGTAATGGGTTTCTCTGATTTCCCCTTCATCGCGAAG 338
Query 301 GAAGGAAGAGACTCGAGGAGATTCCCGGGGCATGAGGAGCTTTGGTTGTATCTTAAGGAT 360
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 339 GAAGGAAGAGACTCGAGGAGATTCCCAGGGCATGAGGAGCTTTTGTTGTATCTTAAGGAT 398
Query 361 TTTTGTCAAGTGTTTGGGTTAAGAGATATGATTAGGTTTAATGTTAGGGTTGAGTTTGTG 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 399 TTTTGTCAAGTGTTTGGGTTAAGAGAGATGATTAGGTTTAATGTTAGGGTTGAGTTTGTG 458
Query 421 GGAATGGTGAATG-A-A-GATGATGATG-TGA--A---G-AG--ATGGATGGTAAAGAGT 468
||||||||||||| | | |||||||||| ||| | | || ||||||||| ||||||
Sbjct 459 GGAATGGTGAATGAAGATGATGATGATGATGATGATGTGAAGAAATGGATGGTGAAGAGT 518
Query 469 GTAGAGAAGGAGAGCGGTGAGGTTATGGAAGAAGTGTTTGATGCTGTTGTTGTTGCCTCT 528
||| |||| | || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTAAAGAA--A-AGTGGTGAGGTTATGGAAGAAGTGTTTGATGCTGTTGTTGTTGCCTCT 575
Query 529 GGCCATTACTCTTATCCTAGATTGCCTTCCATCAAAGGAATGGATTTGTGGAAGAGGAAG 588
||||||||||||||||||||||||||| | || ||||| |||||||||||||||||||||
Sbjct 576 GGCCATTACTCTTATCCTAGATTGCCTACAATTAAAGGTATGGATTTGTGGAAGAGGAAG 635
Query 589 CAACTTCATAGCCATATCTATAGAGTGCCTGATCCTTTTCGTGATGAGGTTGTGGTTGTC 648
||||||||||||||||| |||||||||||||| |||||| |||||||||| ||||| |||
Sbjct 636 CAACTTCATAGCCATATATATAGAGTGCCTGAGCCTTTTTGTGATGAGGTAGTGGTGGTC 695
Query 649 GTTGGATGCTCAATGAGTGGACAAGACATATCAATAGAGCTTGTGAAAGTGGCAAAGGAA 708
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 696 GTTGGATGCTCAATGAGTGGACAAGACATATCAATAGAGCTTGTGGAAGTGGCAAAGGAA 755
Query 709 GTTCATCTAAGTGCCAAATCACTTGAGATTCCTCCTGGCTTGACTAAAGTCATTGAAAAA 768
|||||||||||| ||||||||||||| ||||||||||||||| | |||||||||||||||
Sbjct 756 GTTCATCTAAGTACCAAATCACTTGATATTCCTCCTGGCTTGTCCAAAGTCATTGAAAAA 815
Query 769 CATCAAAATCTTCATCTTCATCCTCAAATTGAATCTCTAGAAGAAGATGGACGGGTCATC 828
||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 816 CATCAAAATCTCCATCTTCATCCTCAGATTGAATCTCTGGAAGAAGATGGACGGGTCATT 875
Query 829 TTCGATGATGGGTCTTGTATTGTAGCCGACACTATTTTATACTGTACCGGGTATGATTAC 888
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 876 TTCGAAGATGGGTCTTGCATTGTAGCCGACACTATTTTATACTGTACCGGGTATGAGTAC 935
Query 889 AAATTGCCATTTCTTGAGAGCAAAGGAAGAGTAGAAATTGATGATAATAGAGTTGGACCA 948
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 936 AAATTTCCATTTCTTGAGAGCAAAGGAAGAGTAGAGATTGATGATAATAGAGTTGGACCA 995
Query 949 CTCTTCGAACATACTTTCTCTCCTTATCTCTCCCCTTCTCTCTCCTTTGTCGGAATCCCT 1008
||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||
Sbjct 996 CTCTTCGAACATACTTTCTCTCCTTCTCTATCCCCTTTTCTCTCCTTTGTCGGAATCCCT 1055
Query 1009 CGAAAGTTAATTGGGTTCCCATTCTTCGAATCACAAGCGAAATGGATAGCGAAGCTTTTG 1068
|||||||| || |||||||||||||| ||||||||||| |||||||| || |||||||||
Sbjct 1056 CGAAAGTTGATAGGGTTCCCATTCTTTGAATCACAAGCTAAATGGATTGCAAAGCTTTTG 1115
Query 1069 TCAGGCAAAACATGTCTTCCTTCCTCTGATCAAATGATGCAATCAATCTCTGAATTCTAC 1128
||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1116 TCAGGCAAAACTTCACTTCCTTCCTCTGATCAAATGATGCAATCAATCTCTGATTTCTAT 1175
Query 1129 CTCTCCAGAGAAGCTGACGGAATCCCAAAACGCAACACTCACGACATCGCCGATTTCAAT 1188
||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1176 CTCGCCAGAGAAGCTGACGGAATCCCTAAACGTAACACTCACGACATCGCCGATTTCAAT 1235
Query 1189 TATAGCGATAAATACGCCGATTACATTGGATTTCCACATTTAGAAGAATGGAGAAAGGTC 1248
||||||||||||||||| |||||||| |||||||||||| | || |||||||||||||||
Sbjct 1236 TATAGCGATAAATACGCGGATTACATCGGATTTCCACATCTGGAGGAATGGAGAAAGGTC 1295
Query 1249 TTGTGTGTATCGGCTATAGTGAATTCCATCGAAAATCTGGAGACTTATCGTGATTCTTGG 1308
|||||| ||||||||||| ||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1296 TTGTGTTTATCGGCTATATTGAATTCCATCGAAAATCTAGAGACTTATCGTGACTCTTGG 1355
Query 1309 GACGACGATGATCTTCTTCAAGAAACTCTTCAAGACCCTTATTTTACCCAAGA---AATT 1365
||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 1356 GACGATGATGATCTTCTTCAAGAAACTCTTCAAGACCCTTACTTTACCCAACTTTCAATT 1415
Query 1366 CCTTCTGTTTaa-aaaaaCA 1384
|||||||||| | |||||||
Sbjct 1416 CCTTCTGTTTGATAAAAACA 1435
> AT5G07800.1 | Symbols: | Flavin-binding monooxygenase family
protein | chr5:2486576-2489296 REVERSE LENGTH=1579
Length=1579
Score = 1013 bits (548), Expect = 0.0
Identities = 1096/1350 (81%), Gaps = 79/1350 (6%)
Strand=Plus/Plus
Query 39 ATCAAAGACGGTATGTGTGATAGGAGCAGGACCATCCGGGTTAGTGTCGGCGCGAGAGCT 98
|||||||| |||||||||||| ||||| ||||| | |||||||| ||||| | |||||
Sbjct 91 ATCAAAGAAGGTATGTGTGATCGGAGCTGGACCGGCGGGGTTAGTCTCGGCAAGGGAGCT 150
Query 99 AAAG-AAAGAAGGACATAAAGTGGTGGTGATGGAGCAAAAC-AACGACGTAGGAGGTCAG 156
||| ||||||||||| |||||||||||| ||||||||||| || ||||||||||||||
Sbjct 151 -AAGAAAAGAAGGACACAAAGTGGTGGTGTTGGAGCAAAACGAA-GACGTAGGAGGTCAA 208
Query 157 TGGCTATACCAACCAAACGTAGAAGAAGAAGATACATTGGGAA-AA--A------CCA-A 206
||| | || |||||||||||||||||||||||| | || |||| || | |||
Sbjct 209 TGGTTCTATCAACCAAACGTAGAAGAAGAAGATCCCTTAGGAAGAAGTAGTGGTTCCATT 268
Query 207 AATCCT-AA---AA-GTACATAGCAGTGTTTACTCATCCTTGAGGTTGGCTTCGCCGAGA 261
||| | || || || |||||||| ||||||| ||||||||| | | || ||||||
Sbjct 269 AATGGTGAACTGAAGGTCCATAGCAGCATTTACTCTTCCTTGAGGCTAACCTCACCGAGA 328
Query 262 GAGGTAATGGGTT-TCTCTGATTTTCCGTTCACCGCGAAGGAAGGAAGAGACT-CGAGGA 319
||| ||||||||| | || ||||||||||| |||||| |||| ||||| | |||||
Sbjct 329 GAGATAATGGGTTAT-TCGGATTTTCCGTTTTTGGCGAAGAAAGGGAGAGA-TATGAGGA 386
Query 320 GATTCCCGGGGCATGAGGAGCTTTGGTTGTATCTTAAGGATTTTTGTCAAG-TGTTTGGG 378
| || || |||||| ||||||||||||||||||||||||| ||| || ||| | ||||||
Sbjct 387 GGTTTCCAGGGCATAAGGAGCTTTGGTTGTATCTTAAGGACTTTAGTGAAGCT-TTTGGG 445
Query 379 TTAAGAGATATGATTAGGTTTAATGTTAGGGTTGAGTTTGT-GG-GAATGGTGAATGAAG 436
|||||||| |||||||||||||||||||||||||||||||| || ||| ||| ||||
Sbjct 446 TTAAGAGAGATGATTAGGTTTAATGTTAGGGTTGAGTTTGTAGGAGAAAAA-GAA-GAAG 503
Query 437 ATGATGATGTGAAGA-GATGGATGGTAAAGA-GT-GTAGAGAAGGAGAGCGGTGAGGTTA 493
| ||||||||||||| | ||||| || | || || | |||||| || ||| ||||||
Sbjct 504 AGGATGATGTGAAGAAG-TGGATTGTGA-GAAGTAG-AGAGAAATTTAGTGGTAAGGTTA 560
Query 494 TGGAAGA-AGTGTTTGATGCTGTTGTTGTTGCCT-CTGGCCATTACTCTTATCCTAGATT 551
||||||| | | |||||||||||||||||||| | |||| ||||||||| | ||||||||
Sbjct 561 TGGAAGAGA-TCTTTGATGCTGTTGTTGTTGC-TACTGGTCATTACTCTCACCCTAGATT 618
Query 552 GCCTTCCATCAAAGGAATGGATT-TGTGGAAGAGGAAGCAACTTCATAGCCATATCTATA 610
||| || || ||||||||||||| | ||||| ||||||||| ||||||||||| | || |
Sbjct 619 GCCCTCTATTAAAGGAATGGATTCT-TGGAAAAGGAAGCAAATTCATAGCCATGTTTACA 677
Query 611 GAGTGCCTGATCCTTTTCGTGATGAGGTTGTGGTTGTCGTTGG-ATGCTCAATGAGTGGA 669
| ||||||||||| |||||| ||||||| ||||| || ||||| | |||||||||||||
Sbjct 678 GGGTGCCTGATCCATTTCGTAATGAGGTGGTGGTGGTGGTTGGGAA-CTCAATGAGTGGA 736
Query 670 CAAGACATATCAATAGAGCTTGTGAAAGTGGCAAAGGAAGTTCATCTAAGTGCCAA-ATC 728
|||||||||||||| ||||||||| |||||||||||||||||||| |||||||||| | |
Sbjct 737 CAAGACATATCAATGGAGCTTGTGGAAGTGGCAAAGGAAGTTCATTTAAGTGCCAAGA-C 795
Query 729 ACTTGAGAT-TCCTCCTGGC-TTGACTAAAGTCATTGAAAAACATCAAAATCTTCATCTT 786
|||||| || || || |||| || | ||||||||| ||||| | ||| |||| | ||
Sbjct 796 ACTTGATATATCTTC-TGGCCTTT-CAAAAGTCATTTCCAAACACCCAAACCTTCTTATT 853
Query 787 CATCCTCAAATTGAATCTCTAGAAGAAGATGG-ACGGGTCATCTTCGATG-ATGGGTCTT 844
|| || || ||||||||| |||| || ||||| | | |||| || | || |||| ||||
Sbjct 854 CACCCACAGATTGAATCTTTAGAGGATGATGGGAAAG-TCATTTTTG-TGGATGGTTCTT 911
Query 845 GTATTGTAGCCGACACTATTTTATACTGTACCGGGTA-T-GATTACAAATTGCCATTTCT 902
| | || || || || |||||||| || |||||||| | | | |||| || ||||||||
Sbjct 912 GGGTCGTCGCTGATACAATTTTATATTGCACCGGGTACTCG-T-ACAAGTTTCCATTTCT 969
Query 903 TGAGAGCAAAGGAAGAGTAGAAATTGATGATAATAGAGTTGGACCACTCTTCGAACATAC 962
|||||| ||||||||| ||||| | |||||| |||||||||| |||||||||||||| ||
Sbjct 970 TGAGAGTAAAGGAAGAATAGAAGTGGATGATGATAGAGTTGGTCCACTCTTCGAACACAC 1029
Query 963 TTTCTCTCCTTATCTCTCCCCTTCTCTCTCCTTTGTCGGAATCCCTC-GAAAGTTAATTG 1021
|||| |||||| ||||||||||||||||||||||||||| ||||| | ||||||| || |
Sbjct 1030 TTTCCCTCCTTGTCTCTCCCCTTCTCTCTCCTTTGTCGGTATCCC-CAGAAAGTTGATAG 1088
Query 1022 GGTTCCCATTCTTCGAATCACAAGCGAAATGGATAGCG-AAGCTTTTGTCAGGCAAAA-C 1079
| ||||||||||| ||| ||||||| ||||||||||| ||| |||||||||| ||| |
Sbjct 1089 GATTCCCATTCTTTGAAGCACAAGCAAAATGGATAGCACAAG-TTTTGTCAGG-AAAGTC 1146
Query 1080 ATGTCTTCCTTCCTC-TGATCAAATGATGCAATCAATCT-CTGAATTCTACCTCTCCAGA 1137
|| ||||||||| || ||| |||||| | |||||| | | || || |||| || |||
Sbjct 1147 ATCTCTTCCTTC-TCCTGACCAAATGTTACAATCAGTAGAC-GAGTTTTACCGGTCAAGA 1204
Query 1138 GAAGCT-GACGGAATCCCAAAACGCAACACTCACGACATCGCCGATTTCAATTATAGCGA 1196
|| || | |||| |||| |||| ||||||||||||||| |||||||||| ||| ||||
Sbjct 1205 GAT-CTAGCCGGAGTCCCTAAACACAACACTCACGACATTGCCGATTTCACGTATTGCGA 1263
Query 1197 TAAATACGCCGATTACATTGGATTTCCACATTTAGAAGAATGGAGAAAGGT-CT-TGTGT 1254
||| ||||| ||||| |||| ||||| ||||||||||| ||||||||| | || ||| |
Sbjct 1264 TAAGTACGCGGATTATGTTGGGTTTCCGCATTTAGAAGATTGGAGAAAGCTACTATGTTT 1323
Query 1255 GTATCGGCTAT-AGTGAATTC-CATCGAAAATCTGGAGACTTATCGTGATTCTTGGGACG 1312
|| | | || | | | ||||| || |||||||| ||||||||||| ||||||||||| |
Sbjct 1324 GTCT-G-CTCTCAAT-AATTCACAA-GAAAATCTTGAGACTTATCGCGATTCTTGGGATG 1379
Query 1313 A-CGATGATCTTCTTCAAGAAACTCTTCAA 1341
| | |||| || || |||||| ||||||||
Sbjct 1380 ATC-ATGAACTCCTACAAGAAGCTCTTCAA 1408
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70531765725
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5