BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496290
Length=1392
Score E
Sequences producing significant alignments: (Bits) Value
AT5G61320.1 | Symbols: CYP89A3 | cytochrome P450, family 89, su... 1424 0.0
AT1G64930.1 | Symbols: CYP89A7 | cytochrome P450, family 87, su... 248 1e-64
AT1G64900.1 | Symbols: CYP89A2, CYP89 | cytochrome P450, family... 248 1e-64
AT1G64950.1 | Symbols: CYP89A5 | cytochrome P450, family 89, su... 235 8e-61
> AT5G61320.1 | Symbols: CYP89A3 | cytochrome P450, family 89,
subfamily A, polypeptide 3 | chr5:24655098-24656638 REVERSE
LENGTH=1494
Length=1494
Score = 1424 bits (771), Expect = 0.0
Identities = 951/1035 (92%), Gaps = 23/1035 (2%)
Strand=Plus/Plus
Query 1 ATGGCGACATGGTTTCTA-ATCATCTTCCTCTCTCTCACACTTGCCCTCCTTATCCACCT 59
|||||||||||||||| | ||| ||| | ||||| ||||| | | ||||| | | ||
Sbjct 1 ATGGCGACATGGTTTC-ACATCTTCTGCGTCTCTTTCACAGTCAACTTCCTTCTATATCT 59
Query 60 CTTCCTCCGCCG--C-ACCAACTCTCTTCCTCTACCTCCTAACCCTAACTTCTTCCCCAT 116
|||| ||||| | | | |||| ||||||||||||||| ||||||||||||||||||||
Sbjct 60 CTTCTTCCGCAGAACTAACAACAATCTTCCTCTACCTCCGAACCCTAACTTCTTCCCCAT 119
Query 117 -CCTTGGTCCCTTCCAGTGGCTCCGTCAAGGCTTCGATGGTTTTTACTCCTACCTCCGCT 175
|| ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||
Sbjct 120 GCC-TGGTCCCTTCCAGTGGCTCCGTCAAGGCTTCGATGATTTCTACTCCTATCTCCGCT 178
Query 176 CCATCCACCACCGTCTCGGCCCAATCATCTCCCTCCGCATCTTTTCCGTCCCTGCCATCT 235
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 179 CCATCCACCACCGTCTCGGCCCAATCATCTCTCTCCGCATCTTTTCCGTCCCTGCCATCT 238
Query 236 TCGTTTCTGATCGTTCCTTGGCTCACAAGGCACTCGTTTTAAACGGCGCCGTTTTCTCCG 295
|||| |||||||||||||||||||||||||| || ||||||||||||||||| ||||| |
Sbjct 239 TCGTCTCTGATCGTTCCTTGGCTCACAAGGCTCTTGTTTTAAACGGCGCCGTATTCTCTG 298
Query 296 ATCGTCCACCGGCGCTTCCAACCGGAAAGATCATCACTAGTAACCAACACACTATCAGCT 355
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 299 ATCGTCCACCGGCGCTTCCTACCGGAAAGATCATCACTAGTAACCAACACACCATCAGCT 358
Query 356 CAGGTA-CATACGGAGCCACGTGGCGACTTCTCCGTCGAAATCTCACTTCCGAGATTCTT 414
|||| | |||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct 359 CAGG-ATCATACGGAGCTACGTGGCGACTTCTCCGTCGTAATCTCACCTCCGAGATTCTT 417
Query 415 CATCCATCTCGCGTCAAATCTTATTCCAACGCTCGTCGCTCTGTTCTTGAAAACCTCTGT 474
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 CATCCATCCCGTGTCAAATCTTATTCCAACGCTCGTCGCTCTGTTCTTGAAAACCTCTGT 477
Query 475 TCTCGAATTCGTAATCACGGCGATGAAGAAGGAAAACCGATCGTCGTCGTTGATCATCTC 534
|||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||
Sbjct 478 TCTCGAATTCGTAATCACGG-G--GAAGAAGCAAAACCGATCGTCGTCGTTGATCATCTC 534
Query 535 CGCCACGCAATGTTCTCGCTTCTTGTTCTCATGTGTTTCGGAGATAAGCTTGATGAAGAA 594
|| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 535 CGTTATGCAATGTTCTCGCTTCTTGTTCTCATGTGTTTCGGAGATAAGCTTGACGAAGAA 594
Query 595 CAGATCAAACAAGTCGAATTCGTTCAAAGAAGAGAGCTCCTCACGTTACCAAGATTCAAC 654
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 595 CAGATCAAACAAGTCGAATTCGTTCAAAGAAGAGAGCTCATCACGTTACCAAGATTCAAC 654
Query 655 ATCCTCAATGTCTTCCCTAGTTTCACCAAACTGTTTCTAAGAAAGAGATGGGAAGAGTTT 714
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct 655 ATCCTCAATGTCTTCCCTAGTTTCACCAAGTTGTTTCTGAGAAAGAGATGGGAAGAGTTT 714
Query 715 CTTATGTTCCGTAGAGAACACAAGAACGTCTTGCTTCCGTTGATTCGATCCCGGAGAAAG 774
|||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 715 CTTACGTTCAGGAGAGAACACAAGAACGTCTTGCTTCCGTTGATTCGTTCCCGGAGAAAG 774
Query 775 ATTATCGAA-GAATCTAAAGATTCCGATAAAGAATACGTACAATCGTATGTAGATACTCT 833
|| || || |||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 775 ATCAT-GATCGAATCTAAAGATTCCGGTAAAGAATACATACAATCGTATGTAGATACTCT 833
Query 834 GCTTGATCTTAAGCTTCCTGAAGAGAAGAGGAAACTAAACGAAGACGAAATCGTGAGCTT 893
||| |||||| |||||||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct 834 GCTCGATCTTGAGCTTCCTGATGAGAAGAGGAAACTAAACGAAGACGAGATCGTGAGTTT 893
Query 894 ATGCTCTGAGTTTCTCAACGCCGGGACTGATACAACAGCGACGACGCTACAATGGATCAT 953
||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct 894 ATGCTCTGAGTTTCTCAACGCCGGGACTGATACAACAGCGACGACACTTCAATGGATAAT 953
Query 954 GGCGAATCTTATCAAAAGCATAATCGgagaagaagaagagaaggagattgaagaagaaga 1013
|||||||||| | ||||||| ||||||||||||||||||||||||||||||||
Sbjct 954 GGCGAATCTT-------G--TAATCGGTGAAGAAGAAGAGAAGGAGATTGAAGAAGAAGA 1004
Query 1014 gatgaagaagaTGCC 1028
|||||||||||||||
Sbjct 1005 GATGAAGAAGATGCC 1019
Score = 558 bits (302), Expect = 4e-158
Identities = 341/360 (95%), Gaps = 2/360 (1%)
Strand=Plus/Plus
Query 1034 GGACGTTTAATATCAATGTGGCGATGATAGGGAGAGATCCAACGGTGTGGGAGGAGCCAA 1093
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1136 GGACGTTTAATATCAATGTGGCGATGATAGGGAGAGATCCAACAGTGTGGGAGGAGCCAA 1195
Query 1094 TGGAGTTTAAGCCGGAGAGATTCATCGGAGAAGA-AGAAGAAGTGGATGTTACTGGAAGT 1152
|||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||
Sbjct 1196 TGGAGTTTAAGCCGGAGAGATTCATCGGAGAAGATA-AAGAAGTTGATGTTACTGGAAGT 1254
Query 1153 AGAGGGATAAAGATGATGCCGTTCGGAGCAGGAAGGAGGATTTGTCCAGGGATAGGATTG 1212
||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| |
Sbjct 1255 AGAGGGATAAAGATGATGCCGTTTGGAGCAGGAAGGAGGATCTGTCCAGGGATTGGATCG 1314
Query 1213 GCTATGTTGCATTTGGAGTATTTTGTGGTGAATTTGGTGAAAGAGTTTGAATGGAAAGAA 1272
|| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1315 GCCATGTTGCATTTGGAGTATTTTGTGGTGAATTTGGTTAAAGAGTTTGAGTGGAAAGAA 1374
Query 1273 GTTGAAGGTGATGAAGTTGACTTGTCTGAGAAATGGGAGTTCACTGTTGTCATGAAGTAT 1332
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1375 GTTGAAGGTTATGAAGTTGACTTGTCTGAGAAATGGGAGTTCACTGTTGTTATGAAGTAT 1434
Query 1333 CCTCTTAAGGCTCGTGCTGTGCCAAGAATGAAGGATAAGACACATATTGTCATGGCTTAG 1392
|||||||| |||| ||||||| |||||| |||||| ||||||||||| ||||||||||||
Sbjct 1435 CCTCTTAAAGCTCTTGCTGTGACAAGAAGGAAGGAGAAGACACATATCGTCATGGCTTAG 1494
> AT1G64930.1 | Symbols: CYP89A7 | cytochrome P450, family 87,
subfamily A, polypeptide 7 | chr1:24120926-24122461 FORWARD
LENGTH=1536
Length=1536
Score = 248 bits (134), Expect = 1e-64
Identities = 257/317 (81%), Gaps = 5/317 (2%)
Strand=Plus/Plus
Query 1051 GTGGC-GATGATAGGGAGAGATCCAACGGTGTGGGAGGAGCCAATGGAGTTTAAGCCGGA 1109
||||| || ||||||||| ||||||| |||||||||||| ||||||| ||||||||| ||
Sbjct 1216 GTGGCAGA-GATAGGGAGGGATCCAAAGGTGTGGGAGGAACCAATGGCGTTTAAGCCAGA 1274
Query 1110 GAGATTCATCGGAGAAGAAGAAGAAGTGGATGTTACTGGAAGTAGAGGGATAAAGATGAT 1169
||| || || ||||||||||||| ||||| | || ||||| |||||||||||||||||
Sbjct 1275 GAGGTTTATGGGAGAAGAAGAAGCGGTGGACATAACCGGAAGCAGAGGGATAAAGATGAT 1334
Query 1170 GCCGTTCGGAGCAGGAAGGAGGATTTGTCCAGGGATAGGATTGGCTATGTTGCATTTGGA 1229
|||||||||||| || || ||||| ||||| ||||| || | || ||| |||| | ||
Sbjct 1335 GCCGTTCGGAGCGGGTAGAAGGATATGTCCCGGGATTGGGCTAGCGATGCTGCACCTCGA 1394
Query 1230 GTATTTTGTGGTGAATTTGGTGAAAGAGTTTGAATGGAAAGAAGTTGAAGGTGATGAAGT 1289
||||| ||||| |||| |||||| || || |||||||||| || |||||| |||||||
Sbjct 1395 GTATTATGTGGCGAATATGGTGAGGGAATTCCAATGGAAAGAGGTCGAAGGTCATGAAGT 1454
Query 1290 TGACTTGTCTGAGAAA-TGGGAGTTCACTGTTGTCATGAAGTATCCTCTTAAGGCTCGTG 1348
||||||| ||||||| | | |||| || || ||||||| |||| ||||||||| ||
Sbjct 1455 TGACTTGACTGAGAAGGTCG-AGTTTACCGTAATCATGAAACATCCGCTTAAGGCTATTG 1513
Query 1349 CTGTGCCAAGAATGAAG 1365
|||| || || | ||||
Sbjct 1514 CTGTTCCTAGGA-GAAG 1529
> AT1G64900.1 | Symbols: CYP89A2, CYP89 | cytochrome P450, family
89, subfamily A, polypeptide 2 | chr1:24113215-24114984 FORWARD
LENGTH=1770
Length=1770
Score = 248 bits (134), Expect = 1e-64
Identities = 250/306 (82%), Gaps = 8/306 (3%)
Strand=Plus/Plus
Query 1051 GTGGC-GATGATAGGGAGAGATCCAACGGTGTGGGAGGAGCCAATGGAGTTTAAGCCGGA 1109
||||| || ||||||||| |||||| || |||||| || ||||||| ||||||||| ||
Sbjct 1269 GTGGCGGA-GATAGGGAGGGATCCAGTGGAGTGGGAAGAACCAATGGCGTTTAAGCCAGA 1327
Query 1110 GAGATTCATCGGAGAAGAAGAAGAAGTGGATGTTACTGGAAGTAGAGGGATAAAGATGAT 1169
||| || || ||||||||||||| ||||| | || |||||||||||||||||||||||
Sbjct 1328 GAGGTTTATGGGAGAAGAAGAAGCGGTGGACCTCACCGGAAGTAGAGGGATAAAGATGAT 1387
Query 1170 GCCGTTCGGAGCAGGAAGGAGGATTTGTCCAGGG-ATAGGAT-TGGCTATGTTGCATTTG 1227
|||||||||||||||||| ||||| ||||| ||| ||||| | | || ||||||||| ||
Sbjct 1388 GCCGTTCGGAGCAGGAAGAAGGATATGTCC-GGGCATAGG-TCTAGCAATGTTGCATCTG 1445
Query 1228 GAGTATTTTGTGGTGAATTTGGTGAAAGAGTTTGAATGGAAAGAAGTTGAAGGTGATGAA 1287
||||| | || | || |||| | |||||| |||||||||| || ||||| |||||
Sbjct 1446 GAGTACTACGTCGCCAACATGGTCAGAGAGTTCCAATGGAAAGAGGTCCAAGGTCATGAA 1505
Query 1288 GTTGACTTGTCTGAGAAA-TGGGAGTTCACTGTTGTCATGAAGTATCCTCTTAAGGCTCG 1346
|| |||||| | ||||| | | | |||||||| ||||||||| |||| ||||||||||
Sbjct 1506 GTGGACTTGACGGAGAAGCTCGAA-TTCACTGTCGTCATGAAGCATCCGCTTAAGGCTCT 1564
Query 1347 TGCTGT 1352
||||||
Sbjct 1565 TGCTGT 1570
> AT1G64950.1 | Symbols: CYP89A5 | cytochrome P450, family 89,
subfamily A, polypeptide 5 | chr1:24127561-24129458 FORWARD
LENGTH=1898
Length=1898
Score = 235 bits (127), Expect = 8e-61
Identities = 264/329 (80%), Gaps = 13/329 (4%)
Strand=Plus/Plus
Query 1040 TTAATATCAAT-GTGGC-GATGATAGGGAGAGATCCAACGGTGTGGGAGGAGCCAATGGA 1097
||||| || || ||||| || ||||||||| ||||||| ||||||||||| |||||||
Sbjct 1234 TTAATTTC-ATGGTGGCAGA-GATAGGGAGGGATCCAAAAGTGTGGGAGGAACCAATGGC 1291
Query 1098 GTTTAAGCCGGAGAGATTCATCGGAGAAGAAGAAGAAGTGGATGTTACTGGAAGTAGAGG 1157
||||||||| ||||| || || | ||||||| | ||||| | || ||||| |||||
Sbjct 1292 GTTTAAGCCAGAGAGGTTTAT--G-GAAGAAG-CG--GTGGACATAACCGGAAGCAGAGG 1345
Query 1158 GATAAAGATGATGCCGTTCGGAGCAGGAAGGAGGATTTGTCCAGGGATAGGATTGGCTAT 1217
|||||||||||||||||||||||| || || ||||||||||||||||| || | || ||
Sbjct 1346 GATAAAGATGATGCCGTTCGGAGCGGGTAGAAGGATTTGTCCAGGGATTGGGCTAGCGAT 1405
Query 1218 GTTGCATTTGGAGTATTTTGTGGTGAATTTGGTGAAAGAGTTTGAATGGAAAGAAGTTGA 1277
| ||||| ||||||| | ||||| |||| |||||| |||||||| ||||| || || |
Sbjct 1406 GCTGCATCTGGAGTACTATGTGGCGAATATGGTGAGGGAGTTTGACTGGAAGGAGGTCCA 1465
Query 1278 AGGTGATGAAGTTGACTTGTCTGAGAAA-TGGGAGTTCACTGTTGTCATGAAGTATCCTC 1336
|||| ||||||| |||||| | ||||| | | |||| || || ||||||||| |||| |
Sbjct 1466 AGGTCATGAAGTGGACTTGACGGAGAAGCTCG-AGTTTACCGTAGTCATGAAGCATCCGC 1524
Query 1337 TTAAGGCTCGTGCTGTGCCAAGAATGAAG 1365
||||||| | |||||| || || | ||||
Sbjct 1525 TTAAGGCCCTTGCTGTTCCTAGGA-GAAG 1552
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68573944470
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5