BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496302
Length=1426
Score E
Sequences producing significant alignments: (Bits) Value
AT5G61430.1 | Symbols: ANAC100, ATNAC5, NAC100 | NAC domain con... 2106 0.0
AT5G07680.1 | Symbols: ANAC080, ANAC079, ATNAC4, NAC080 | NAC d... 905 0.0
> AT5G61430.1 | Symbols: ANAC100, ATNAC5, NAC100 | NAC domain containing
protein 100 | chr5:24701122-24702761 REVERSE LENGTH=1425
Length=1425
Score = 2106 bits (1140), Expect = 0.0
Identities = 1348/1443 (93%), Gaps = 35/1443 (2%)
Strand=Plus/Plus
Query 1 ATTTTCCTCTCCATCTTCCTAACCTTTCTCCCTAACTTCTCTGTTCATCTTTTTC-CTCT 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1 ATTTTCCTCTTCATCTTCCTAACCTTTCTCCCTAACTTCTCTGTTCATCTTTTTCTCTCT 60
Query 60 CTATTTATAAATTTATTTACATAGTATTCCT-TGGATCCATCTCTTC-----AAAAAACC 113
||||||||||||||| | ||||||| | || || ||| || ||||| |||||| |
Sbjct 61 TTATTTATAAATTTATCTGCATAGTACT-CTCTGAATCTATATCTTCAAAAAAAAAAAAC 119
Query 114 TTTCAAGATCAAATCAAGAAACCCACACAAGTTTCTAAATCAGaaaaaaaaTTTAAGTTT 173
| |||||||||||||||||| | | | | | | || | |||||||| | | ||||
Sbjct 120 GTCCAAGATCAAATCAAGAAA--C-C-C-A---T-T-AA--A-AAAAAAAA-TCAGGTTT 165
Query 174 TGGTTTCAATTTTAAGGGTTTAAGGTTTCTTGGGAAAGAAACGATGGAGACTTTTTGTGG 233
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 166 TGGTTTCAGTTTTAAGGGTTTAAGGTTTCTTGGGGAAGAAACGATGGAGACTTTTTGTGG 225
Query 234 GTTTCAGAAGGAAGAAGAGCAGATGGATTTACCTCCAGGGTTCAGGTTTCATCCAACAGA 293
|||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 226 GTTTCAAAAGGAGGAAGAGCAGATGGATTTACCTCCTGGGTTCAGGTTTCATCCAACAGA 285
Query 294 TGAAGAACTCATAACTCACTATCTCCATAAGAAGGTTCTTGACATCAGCTTCTCAGCTAA 353
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 286 TGAAGAACTCATAACTCACTATCTCCATAAGAAGGTTCTTGACACCAGCTTCTCAGCTAA 345
Query 354 AGCTATTGGTGAAGTTGATTTAAACAAATCGGAGCCATGGGAGTTACCATGGATGGCAAA 413
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 346 AGCTATCGGTGAAGTTGATTTAAACAAATCAGAGCCATGGGAGTTACCATGGATGGCAAA 405
Query 414 AATGGGTGAGAAAGAATGGTATTTTTTCTGTGTGAGAGACAGAAAGTATCCCACCGGTTT 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 406 AATGGGTGAGAAAGAATGGTATTTTTTCTGTGTGAGAGACAGAAAGTATCCCACCGGTTT 465
Query 474 AAGGACTAACCGAGCAACTGAAGCCGGTTATTGGAAGGCCACCGGGAAGGATAAAGAGAT 533
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 466 AAGAACTAACCGAGCAACTGAAGCCGGTTATTGGAAGGCGACCGGGAAGGATAAAGAGAT 525
Query 534 ATACCGAGGCAAATCGCTTGTTGGGATGAAGAAGACACTTGTTTTCTATAGAGGACGAGC 593
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 526 ATACCGAGGCAAATCACTTGTTGGGATGAAGAAGACACTTGTTTTCTATAGAGGAAGAGC 585
Query 594 TCCTAAAGGTCAGAAAACCAACTGGGTGATGCATGAGTATAGGCTTGAAGGAAAATTCTC 653
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 586 TCCTAAAGGTCAGAAAACCAACTGGGTGATGCATGAGTACAGGCTTGAAGGAAAATTCTC 645
Query 654 CGCCCATAACTTGCCGAAAACCGCAAAGAATGAATGGGTGATATGCAGGGTGTTCCAAAA 713
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 646 TGCCCATAACTTGCCGAAAACCGCAAAGAATGAATGGGTGATATGCAGGGTGTTCCAAAA 705
Query 714 GAGTGCTGGAGGGAAGAAGATCCCGATTTCGAGTCTAATCCGAATTGGTTCACTTGGAAC 773
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 706 GAGTGCTGGAGGGAAGAAGATCCCGATTTCGAGTCTAATCCGAATCGGTTCACTCGGAAC 765
Query 774 CGATTTTAACCCTTCGCTTTTGCCCTCTTTAACCGATTCTTCGCCTTACAATGACAAAAC 833
||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 766 CGACTTTAACCCTTCGCTTTTGCCCTCTTTAACCGATTCTTCGCCTTACAACGATAAAAC 825
Query 834 CAAGACAGAACCCGTCTACGTGCCCTGCTTCTCCAACCAAACGGATCAAAACCAAGGAAC 893
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 826 CAAAACAGAACCGGTCTACGTGCCCTGCTTCTCCAACCAAACGGATCAAAACCAAGGAAC 885
Query 894 CACACTCAATTGCTTCAGCAGCCCTGTTCTTAACTCGATCCAAGCCGACATTTTCCACAG 953
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 886 CACACTCAATTGCTTCAGCAGCCCTGTTCTTAACTCGATCCAAGCCGACATTTTTCACAG 945
Query 954 GATTCCACTCTATCAAACTCAGTCTCTCCAGGTTTCCACGAATCTACAGAGCCCGATTCT 1013
|||||||||||||||||||||||| ||||||||||| | |||||||||||||||| ||||
Sbjct 946 GATTCCACTCTATCAAACTCAGTCCCTCCAGGTTTCTATGAATCTACAGAGCCCGGTTCT 1005
Query 1014 CACGCAAGAACACTCAGTTCTACATGCTATGATCGAGAACAACAGAAGACAGAGTCTCAA 1073
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1006 CACGCAAGAACACTCAGTTCTACATGCTATGATCGAGAACAACAGAAGACAAAGTCTCAA 1065
Query 1074 AACGATGAGTGTCTCACAAGAAACCGGAGTTTCGACTGACATGAACACTGATATCTCATC 1133
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1066 AACGATGAGTGTCTCACAAGAAACCGGAGTTTCAACTGACATGAACACTGATATCTCATC 1125
Query 1134 GGATTTTGAATTCGGTAAGAGACGATTTGATTCTCAAGAAGATCCATCTTCCTCCACAGG 1193
|||||||||||| ||||||||||| |||||||||||||||||||| |||||||| || ||
Sbjct 1126 GGATTTTGAATTTGGTAAGAGACGGTTTGATTCTCAAGAAGATCCGTCTTCCTCTACTGG 1185
Query 1194 ACCGGTTGATCTTGAACCTTTCTGGAATTACTGAAGAAGATTCAAGAGTCACATGCCCAT 1253
||||||||||||||||||||||||||||||||||||| ||||||||| || |||| ||||
Sbjct 1186 ACCGGTTGATCTTGAACCTTTCTGGAATTACTGAAGATGATTCAAGATTCTCATGTCCAT 1245
Query 1254 TAATTTACTGTGGTGTGTTAAAGTTTGTATAG---ATT---AT-TA-TC--ATCTCAACT 1303
|||||||||||||||||||||||||||||||| ||| || || || || ||||||
Sbjct 1246 TAATTTACTGTGGTGTGTTAAAGTTTGTATAGGCTATTGTCATATACTCTCATATCAACT 1305
Query 1304 TCCACTATTTATTATACTCAATTTAAAGAAACTTAAAAATATGATTTGATATTTGACCAA 1363
|||||||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||
Sbjct 1306 TCCACTATATATTATAA-CAATTTAAAGAAACTTAAAAATATGATTTGATATATGACTAA 1364
Query 1364 AATATTACACTATACAATTTTGTACCTGTACGATGTTCATAATTAAATGTATATTTTAGA 1423
| ||||| | |||||||||||||||| ||||||||| ||||| ||||||||||||||||
Sbjct 1365 AGTATTATA--ATACAATTTTGTACCTCTACGATGTTTATAATCAAATGTATATTTTAGA 1422
Query 1424 ACT 1426
|||
Sbjct 1423 ACT 1425
> AT5G07680.1 | Symbols: ANAC080, ANAC079, ATNAC4, NAC080 | NAC
domain containing protein 80 | chr5:2435875-2437480 FORWARD
LENGTH=1365
Length=1365
Score = 905 bits (490), Expect = 0.0
Identities = 881/1061 (83%), Gaps = 61/1061 (6%)
Strand=Plus/Plus
Query 188 AGGGTTTAAGGTTTCTTGGGAAAGAAAC-GATGGAGACTTTTTGTGGGTTTCAGAAGGAA 246
||||||||||| || || || |||| |||||| ||||| ||| |||||| ||||||
Sbjct 193 AGGGTTTAAGG-TTATT---TAA-AAACAGATGGAAACTTTCGGTGTGTTTCACAAGGAA 247
Query 247 GA--A-GAGCAGATGGATTTACCTCCAGGGTTCAGGTTTCATCCAACAGATGAAGAACTC 303
|| | |||||||||||||| ||||| || || ||||||||||||||||| |||||||||
Sbjct 248 GATGATGAGCAGATGGATTTGCCTCCTGGTTTTAGGTTTCATCCAACAGACGAAGAACTC 307
Query 304 ATAACTCACTATCTCCATAAGAAGGTTCTTGACATCAGCTTCTCAGCTAAAGCTATTGGT 363
||||| ||||||||||| ||||||||||||||| | | ||||| |||||||||||||||
Sbjct 308 ATAACCCACTATCTCCACAAGAAGGTTCTTGACCTTGGTTTCTCGGCTAAAGCTATTGGT 367
Query 364 GAAGTTGATTTAAACAAATCGGAGCCATGGGAGTTACCATGGATGGCAAAAATGGGTGAG 423
|| |||||||| |||||| | |||||||||||||| |||| | |||||||| ||||||
Sbjct 368 GAGGTTGATTTGAACAAAGCTGAGCCATGGGAGTTGCCATATAAAGCAAAAATTGGTGAG 427
Query 424 AAAGAATGGTATTTTTTCTGTGTGAGAGACAGAAAGTATCCCACCGGTTTAAGGACTAAC 483
||||||||||| |||||||||||||| || ||||||||||| || ||| | |||||||||
Sbjct 428 AAAGAATGGTACTTTTTCTGTGTGAGGGATAGAAAGTATCCGACTGGTCTGAGGACTAAC 487
Query 484 CGAGCAACTGAAGCCGGTTATTGGAAGGCCACCGGGAAGGATAAAGAGATATACCGAGGC 543
||||||||| ||||||||||||||||||| || ||||||||||||||||| | |||||||
Sbjct 488 CGAGCAACTCAAGCCGGTTATTGGAAGGCGACAGGGAAGGATAAAGAGATCTTCCGAGGC 547
Query 544 AAATCGCTTGTTGGGATGAAGAAGACACTTGTTTTCTATAGAGGACGAGCTCCTAAAGGT 603
|||||||||||||| |||||||| |||||||||||||| |||||| |||||||||||||
Sbjct 548 AAATCGCTTGTTGGTATGAAGAAAACACTTGTTTTCTACAGAGGAAGAGCTCCTAAAGGC 607
Query 604 CAGAAAACCAACTGGGTGATGCATGAGTATAGGCTTGAAGGAAAATTCTCCGCCCATAAC 663
|||||||| || ||||||||||||||||||||||| || |||||| |||| || || |||
Sbjct 608 CAGAAAACAAATTGGGTGATGCATGAGTATAGGCTAGATGGAAAACTCTCTGCTCACAAC 667
Query 664 TTGCCGAAAACCGCAAAGAATGAATGGGTGATATGCAGGGTGTTCCA-AAAGAGTGCTGG 722
||||| |||||||| ||||||||||||||||| |||||||| || || ||| | ||||||
Sbjct 668 TTGCCTAAAACCGCTAAGAATGAATGGGTGATCTGCAGGGTATTTCATAAA-ACTGCTGG 726
Query 723 AGGGAAGAAGATCCCGATTTCGA-GTCTAATCCGAATTGGTTCACTT--GGAACCGATTT 779
||| ||||||||||||||||||| || |||||||||| |||| ||| |||||||
Sbjct 727 AGGTAAGAAGATCCCGATTTCGACGT-TAATCCGAATCGGTT--CTTACGGAACCG--GG 781
Query 780 TAACCCTTCGCTTTTGCC-CTCTTTAACCGATTCTTCGCCTTACAATGACAAAACCAAGA 838
| | | | ||| || | ||||||| |||||||| || ||||| |||||||||||||
Sbjct 782 T----C-TAG--TTTACCAC-CTTTAACTGATTCTTCACCATACAACGACAAAACCAAGA 833
Query 839 CAGAACCCGTCTACGTGCCCTGCTTCTCCAACCAAACGGATCAAAACCA-AGGAACCACA 897
| ||||| || |||||||||||||||||||||| || | | |||| | |||||| | |
Sbjct 834 CCGAACCAGTTTACGTGCCCTGCTTCTCCAACC-AA--GCT-GAAACTAGAGGAACAATA 889
Query 898 CTCAATTGCTTCAGCAGCCCTGT-TCTTAACTCGATCCAAGCCGACA-TTT-TCCACAGG 954
|||||||||||||||| |||| | |||| ||| |||||| || | | ||| |||| | |
Sbjct 890 CTCAATTGCTTCAGCAACCCT-TCCCTTAGCTCCATCCAA-CC-AGATTTTCTCCAGATG 946
Query 955 ATTCCACTCTATCAAACTCAGTCTCTCCAGGTTTCC-ACGAATCTACAGAGCCCGATTCT 1013
||||||||||| ||| |||| |||||| | ||||| | || | | || | ||| ||||
Sbjct 947 ATTCCACTCTACCAACCTCAATCTCTCAACATTTCCGA-GAGT-TCCA-A-TCCGGTTCT 1002
Query 1014 CACGCAAGAACACTCAGTTCTACATGCTATGATCGAGAACAACAGAAGACAG-AGTCTCA 1072
||||||||||| |||||| |||| || ||||| || ||||||||||| ||| | | |||
Sbjct 1003 TACGCAAGAACAATCAGTTTTACAAGCGATGATGGAAAACAACAGAAGGCAGAACT-TCA 1061
Query 1073 AAACGA-TGAGTGTCTCACAAGAAACCGGAGTTTCGACTGACATGAACACTGATATCTCA 1131
|||| | |||| |||| ||||||||||| ||||||| || || | |||| ||||
Sbjct 1062 AAAC-ATTGAGCATCTCGCAAGAAACCGGGGTTTCGA---AC----AC-C-GATAACTCA 1111
Query 1132 TCGGATTTTGAATTCGGTAAG-AGACGATTTGATTC-TCAAGAAGATCCATCTTCCTCCA 1189
|||| ||||||||| || | | || |||||||| || |||||||| ||||||| ||||
Sbjct 1112 TCGGTTTTTGAATTTGGGAGGAAG-CGATTTGA-TCATCAAGAAGTTCCATCTCCCTCTT 1169
Query 1190 CAGGACCGGTTGATCTTGAACCTTTCTGGAATTACTGAAGA 1230
| || ||||||||||||||||||||||||||||||||||||
Sbjct 1170 CCGGTCCGGTTGATCTTGAACCTTTCTGGAATTACTGAAGA 1210
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70280763000
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5