BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496304 Length=1523 Score E Sequences producing significant alignments: (Bits) Value AT5G61450.1 | Symbols: | P-loop containing nucleoside triphosp... 2268 0.0 > AT5G61450.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:24710033-24712945 REVERSE LENGTH=1614 Length=1614 Score = 2268 bits (1228), Expect = 0.0 Identities = 1434/1530 (94%), Gaps = 27/1530 (2%) Strand=Plus/Plus Query 1 AATTTGGAAGATGAAGGACAGAGAGGAATCATCATCGTCTAGTTCTTCAATGacaacaac 60 ||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 55 AATTT-GAAGATGAAGGACAGAGAGGAATCATCATCGTCTTCTTCTTCAATG---ACAAC 110 Query 61 aacaacaaacaacCCTAATGGAATCATCAACAACGGCGAACACGAACCTCGAGATATCAA 120 | || ||| || |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 111 -A-AA-AAA-AA--CTAATGGAATAATCAACAACGGCGAACACGAACCTCGAGATATCAA 164 Query 121 CATCCGATCATTCTCTTCTGTTCCTTCTTCTCCTCGTAACGCTTCTTCCAAATACGATTT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 165 CATCCGATCATTCTCTTCTGTTCCTTCTTCTCCTCGTAACGCTTCTTCCAAATACGATTT 224 Query 181 CGTCAAGGTGAAGGTATGGCTTGGAGACAACGCCGATCACTACTATGTTCTGTCTCGCTT 240 ||||||||| || |||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 225 CGTCAAGGTCAAAGTATGGCTTGGAGACAACGCAGATCACTACTATGTTCTGTCTCGATT 284 Query 241 CTTAGTTTGTAGAATGTTAACTGTTACTAAGATCCCAAATCATGAGGCTATAAAGATTTC 300 |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 285 CTTAGTCTGTAGAATGTTAACTGTTACTAAGATCCCAAATCATGAAGCTATAAAGATTTC 344 Query 301 TCTTGAACTCAAGAAGCTTCTAATTGACAACAGTCTTCTTGATGTCTCTCAGTCTGATTT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 345 TCTTGAACTCAAGAAGCTTCTAATTGACAACAGTCTTCTTGATGTCTCTCAGTCTGATTT 404 Query 361 GGAAACCAATTTGTTTAAGCTAATGGAGCGACGTGGTTATGGAGAAGAATACATAAATCG 420 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 405 GGAAACCAATTTGTTTAAGCTAATGGAGCGACGTGGTTATGGAGAAGAGTACATTAATCG 464 Query 421 TTACAACATGATGACAAAATTTCATCATCAAAGAGTACCTCTTGTCATACTTGTTTGCGG 480 ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 465 TTATAACATGATGACAAAATTTCATCATCAAAGAGTACCTCTTGTCATACTCGTTTGCGG 524 Query 481 AACAGCTTGTGTTGGCAAGTCCACAATTGCTACACAACTTGCTCAGAGACTAAACTTGCC 540 |||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct 525 AACAGCTTGTGTTGGCAAGTCCACTATAGCTACACAACTTGCTCAGAGACTTAACTTGCC 584 Query 541 TAACGTCTTACAAACAGATATGGTATATGAGCTGCTTCGAACAGCAACTGATGCTCCGTT 600 ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 585 AAACGTTTTACAAACAGACATGGTTTATGAGCTGCTTCGAACAGCAACTGATGCTCCGTT 644 Query 601 AACATCAACCCCTGTATGGACTCGAGAATTCGGCTCATCAGAAGAGTTGATTACTGAATT 660 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 645 GACATCAACCCCTGTATGGACTCGAGAATTCGGCTCATCAGAAGAGTTGATTACTGAATT 704 Query 661 CTGTAGAGAATGCAGAATTGTTCGAAAAGGACTTGGTGGTGATTTAAAGAAAGCAATGAA 720 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 705 CTGTAGAGAATGCAGAATTGTTCGGAAAGGACTTGGTGGTGATTTGAAGAAAGCAATGAA 764 Query 721 AGATGGGAAACCCATTATAATTGAGGGAAGACATTTAGATCCAAGCATATACTTAATGAA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 765 AGATGGGAAACCCATTATAATTGAGGGAAGACATTTAGATCCAAGCATATACTTAATGAA 824 Query 781 TGATGAGAACAAAACTCCATCAAATGATACCGAGAAGAACAGTAGCGAAACAAACTCTTC 840 |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| Sbjct 825 TGATGAGAACAAAACTCCATCAAATGATCCCGAGAAGAGCAGCAGCGAAACAAACTCTTC 884 Query 841 -AAGAGAGT-TAACCTCGGACAAGAATCTCGAGGCAGGGTCTTCAAACATGAAAGAAACC 898 || ||| | ||||||||||||| |||| ||||||| | |||||||||| |||||||||| Sbjct 885 GAA-AGA-TCTAACCTCGGACAAAAATCCCGAGGCAAGTTCTTCAAACACGAAAGAAACC 942 Query 899 GACAATAGTGCTGTGAAACCCGATTCTCAGGATGAAGCCGCGGCATCTGTAAAAGCTATC 958 ||||||||||||||||||||| ||||||| || ||||| | |||||||||| |||| | | Sbjct 943 GACAATAGTGCTGTGAAACCCCATTCTCATGAGGAAGCTGTGGCATCTGTAGAAGCGAAC 1002 Query 959 GACCTATCAGAAAAAGTTACACAATGTAAAATCAACCCTGAAAGTTCAAAAGATGCTGAG 1018 |||| |||||||||||||||||||||| |||| || |||||||||||||||||||||| Sbjct 1003 AACCTCTCAGAAAAAGTTACACAATGTACAATCGACGCTGAAAGTTCAAAAGATGCTGAA 1062 Query 1019 AAGAAAAGCAAATCTGCAGATAGAAGTGGAAAGACGAAATCTGGCCCCGAACCAATAGTC 1078 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct 1063 AAGAAAAGCAAATCTGCAGATGGAAGTGGAAAGACGAAATCTGGCCCTGAACCAATAGTC 1122 Query 1079 ATATCTATAGTTTTAAAGATGGCTGAATTCGATCATAAGGCTTTGCTAGAGGAGTGGATC 1138 |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1123 ATATCTATTGTGTTAAAGATGTCTGAATTCGATCATAAGGCTTTGCTAGAGGAGTGGATC 1182 Query 1139 TCTTCCCGTAAATCTGGAGAGAAATATAC-ATCTAAGGAGAAAGATAGACTAATTACAAA 1197 |||||||||| |||||||||||||||||| | |||||||||||||||||||||| ||||| Sbjct 1183 TCTTCCCGTACATCTGGAGAGAAATATACCA-CTAAGGAGAAAGATAGACTAATAACAAA 1241 Query 1198 CCTAAAGACCATTGAAGACTACCTTTGTTCCTTCAATTCACAGGGAGTGACTGTTGTAAA 1257 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 1242 CCTAAAGACCATTGAAGACTACCTTTGTTCCTTTAATTCACAGGGGGTGACTGTTGTAAA 1301 Query 1258 TATATCGGCCACCACATTCCCGCAGACACTAGATTCGCTTCACAACTATCTTCTTCAGCG 1317 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 1302 TATATCGGCCACCACATTCCCACAGACACTAGATTGGCTTCACAACTATCTTCTTCAGCG 1361 Query 1318 TATTGAGGAAGGGATTCGATCATCAGAGAATGAGGCGCCAAAGTGA--CGCATGCAGAAG 1375 |||||||||||||||||||||||||||||| ||||| || |||||| | |||||| ||| Sbjct 1362 TATTGAGGAAGGGATTCGATCATCAGAGAACGAGGCTCCGAAGTGAGACACATGCAAAAG 1421 Query 1376 AAGTCTTAAGGAGGCTAGAGTCATCTTCTCTAAATGCCTCAGAAACTATATAATAGTTAA 1435 ||||||||||||||||| ||||| ||||| || |||||||||||||| | ||||||| Sbjct 1422 AAGTCTTAAGGAGGCTAAAGTCACCTTCTATA----CCTCAGAAACTATA-A-TAGTTAA 1475 Query 1436 AACAATTGAGATTAGCCAGCTT-TGTATTCTATAGTGTCAGCTGTCACTCGCTATCAAAA 1494 |||||||||||||||| || || |||||||||||||||||||| ||||||| ||| |||| Sbjct 1476 AACAATTGAGATTAGCGAG-TTATGTATTCTATAGTGTCAGCTATCACTCGTTATAAAAA 1534 Query 1495 A-CAAAGAGAAGTTCTTGCATGAACTAATA 1523 | ||||||||| |||||||||||||||||| Sbjct 1535 AACAAAGAGAATTTCTTGCATGAACTAATA 1564 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75150215865 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5