BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496305
Length=3498
Score E
Sequences producing significant alignments: (Bits) Value
AT5G61460.1 | Symbols: MIM, ATRAD18, SMC6B | P-loop containing ... 5705 0.0
AT5G07660.1 | Symbols: SMC6A | structural maintenance of chromo... 2713 0.0
> AT5G61460.1 | Symbols: MIM, ATRAD18, SMC6B | P-loop containing
nucleoside triphosphate hydrolases superfamily protein | chr5:24714076-24721940
REVERSE LENGTH=3646
Length=3646
Score = 5705 bits (3089), Expect = 0.0
Identities = 3374/3511 (96%), Gaps = 22/3511 (1%)
Strand=Plus/Plus
Query 1 TCTCTTTCCCGCCCTAAGCAGTCGCATCAATGGAACTTGATCTTTTCTAATTTGTTTCAG 60
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 4 TCTCTTTCCCGCCCTAAGCAGTCGCATCAATGGAACTTGCTCTATTCTAATTTGTTTCAA 63
Query 61 CCGAGTGAGAG-A-AAACCCTAGAACGCGATAAGCCATGGCAAAATCTGGGGCTCGAGCC 118
||||||||||| | |||||||||||||||| ||||||||| ||||||||| |||||||||
Sbjct 64 CCGAGTGAGAGAAGAAACCCTAGAACGCGAAAAGCCATGGTAAAATCTGGTGCTCGAGCC 123
Query 119 AGTGATTCCTTCATCAAACAGCGTTCTGGGTCGGGTACGATTCTGAGGATCAAAGTTGAG 178
|||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 124 AGTGATTCATTCATCAAACAACGTTCTGGGTCGGGTTCGATTCTGAGGATCAAAGTTGAG 183
Query 179 AATTTCATGTGCCATAGTAATCTCCAGATTGAATTTGGCGAGTGGGTTAATTTCATCACC 238
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 184 AATTTCATGTGCCATAGTAATCTCCAGATTGAGTTTGGCGAGTGGGTTAATTTCATCACC 243
Query 239 GGCCAAAACGGAAGTGGTAAGAGTGCAATACTGACTGCTCTATGTGTTGCATTTGGATGT 298
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 244 GGCCAAAACGGAAGTGGTAAGAGTGCAATACTGACTGCACTATGTGTTGCATTTGGATGT 303
Query 299 CGAGCCAGAGGCACTCAGCGCGCTGCCACTCTAAAGGATTTCATTAAAACTGGATGCAGC 358
||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 304 CGAGCGAGAGGGACTCAGCGTGCTGCCACTCTAAAGGATTTCATTAAAACTGGATGCAGC 363
Query 359 TATGCCGTTGTCCATGTAGAAATGAAAAACAATGGAGAGGATGCTTTTAAGCCTGAAATT 418
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 364 TATGCCGTTGTCCAAGTAGAAATGAAAAACAGTGGAGAGGATGCTTTTAAGCCTGAAATT 423
Query 419 TATGGTGAAGTTATAATTATCGAACGCAGGATAACTGATTCTACTACATCTACCGTTCTC 478
||||||| ||||||||||||||||||||||||||||| ||| ||||| |||| ||||||
Sbjct 424 TATGGTGGCGTTATAATTATCGAACGCAGGATAACTGAGTCTGCTACAGCTACTGTTCTC 483
Query 479 AAAGATTATCTAGGaaaaaaaGTAAGTAACAAAAGGGAGGAGCTACGGGAACTTGTTGAA 538
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 484 AAAGATTATCTAGGAAAAAAAGTAAGTAACAAAAGGGACGAGCTACGGGAACTTGTTGAA 543
Query 539 CATTTTAATATTGATGTTGAAAACCCGTGTGTGGTAATGAGTCAAGACAAAAGCAGGGAG 598
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 544 CATTTTAATATTGATGTTGAAAATCCGTGTGTGGTAATGAGTCAAGACAAAAGCAGGGAG 603
Query 599 TTCTTACATTCTGGAAATGACAAAGATAAATTCAAGTTCTTTTTTAAGGCAACCCTTCTT 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 TTCTTACATTCTGGAAATGACAAAGATAAATTCAAGTTCTTTTTTAAGGCAACCCTTCTT 663
Query 659 CAGCAAGTCAATGATCTTCTCCAAAGTATCTACGAACACTTGA-AAAATGCAACTGCTAT 717
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 664 CAGCAAGTCAATGATCTTCTCCAAAGTATCTACGAACACTTGACAAAA-GCAACTGCTAT 722
Query 718 AGTCGATGAATTGGAGAACACAATTAAACCAATAGAAAAGGAGATCAGTGAGTTGCGTGG 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 723 AGTCGATGAATTGGAGAACACAATTAAACCAATAGAAAAGGAGATCAGTGAGTTGCGTGG 782
Query 778 AAAGATAAAGAATATGGAACAAGTTGAAGAAATAGCTCAAAAGTTGCAGCAGTTGAAGAA 837
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 783 AAAGATAAAGAATATGGAACAAGTTGAAGAAATAGCTCAAAGGTTGCAGCAGTTGAAGAA 842
Query 838 GAAACTGGCTTGGTCATGGGTATATGATGTGGATAGGCAGCTCCAGGAACAGACTGAGAA 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 843 GAAACTGGCTTGGTCATGGGTATATGATGTGGATAGGCAGCTCCAGGAACAGACTGAGAA 902
Query 898 GATTGTGAAGCTTAAAGAACGTATACCGACTTGCCAAGCTAAAATAGATTGGGAACTGGG 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 903 GATTGTGAAGCTTAAAGAACGTATACCGACTTGCCAAGCTAAAATAGATTGGGAACTGGG 962
Query 958 TAAAGTAGAATCGTTAAGGGATACATTGACCAAGAAGAAAGCTCAAGTTGCATGTCTGAT 1017
||||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 963 AAAAGTGGAATCATTAAGGGATACGTTGACCAAGAAGAAAGCTCAAGTTGCGTGTCTGAT 1022
Query 1018 GGATGAATCAACTGCAATGAAGAGAGAGATAGAGAGTTTTCACCAATCAGCGAAGACGGC 1077
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1023 GGATGAATCAACTGCAATGAAGAGAGAGATAGAGAGTTTTCACCAATCAGCCAAGACGGC 1082
Query 1078 TGTACGAGAAAAGATTGCTCTACAAGAAGAATTCAATCATAAGTGCAATTATGTTCAAAA 1137
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1083 TGTACGAGAAAAAATTGCTCTACAAGAAGAATTCAATCATAAGTGCAATTATGTTCAAAA 1142
Query 1138 GATTAAGGATCGTGTTAGAAGGCTTGAACGGCAGGTTGGAGATATCAATGAACAGACAAT 1197
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1143 GATTAAGGATCGTGTTAGAAGGCTTGAACGGCAAGTTGGAGATATCAATGAACAGACAAT 1202
Query 1198 GAAAAACACACAGGCTGAACAATCTGAAATCGAGGAGAAACTAAAATATTTGGAGCAGGA 1257
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 GAAGAACACACAGGCTGAACAATCTGAAATCGAGGAGAAACTAAAATATTTGGAGCAGGA 1262
Query 1258 GGTTGAGAAAGTTGAAACCTTGCTTTTCAGATTGAAAGAGGAAGAGAACTGCTTAC-TGG 1316
|||||||||||||||||| |||| || ||||||||||||||||||||||||||| | |||
Sbjct 1263 GGTTGAGAAAGTTGAAACATTGCGTTCCAGATTGAAAGAGGAAGAGAACTGCTT-CTTGG 1321
Query 1317 AAAAAGCGTTTGATGGGAGGAAAGAGATAGAACACATCGAGGATATGATTAAAAACCATC 1376
||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 1322 AAAAAGCGTTTGAAGGGAGGAAAAAGATGGAACACATCGAGGATATGATTAAAAACCATC 1381
Query 1377 AAAAGAGGCAAAGATTCGTAACGTCGAACATTAATGATCTGAAGAAACATCAAACAAACA 1436
||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1382 AAAAGAGGCAAAGATTCATAACCTCGAACATTAATGATCTGAAGAAACATCAAACAAATA 1441
Query 1437 AGGTTACTGCATTTGGAGGGGACAGAGTCATTAATCTTCTGCAGGCTATTGAGAGAAATC 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1442 AGGTTACTGCATTTGGAGGGGACAGAGTCATTAATCTTCTGCAGGCTATTGAGAGAAATC 1501
Query 1497 ATCGTAGATTCAGAAAACCACCAATTGGTCCTATTGGCTCCCATGTGACTTTAGTCAATG 1556
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1502 ATCGTAGATTTAGAAAACCACCAATTGGTCCTATTGGCTCCCATGTGACTTTAGTCAATG 1561
Query 1557 GCAATAAATGGGCTTCTACAGTTGAACAAGCTCTTGGAAACCTATTAAATGCCTTCATTG 1616
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1562 GCAATAAATGGGCTTCTTCAGTTGAACAAGCTCTTGGAACCCTATTAAATGCCTTCATTG 1621
Query 1617 TGACTGATCATAAAGATTCGCTCACTCTAAGAGGCTGTGCAAATGAAGCCAATTATAGAA 1676
|||||||||| |||||||| |||||||||||||||||||| |||||||| || |||||||
Sbjct 1622 TGACTGATCACAAAGATTCTCTCACTCTAAGAGGCTGTGCGAATGAAGCTAACTATAGAA 1681
Query 1677 ACCTCAAGATTATCATCTATGACTTTTCGAGACCAAGGTTGAATATACCAAGGCACATGA 1736
| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1682 ATCTTAAGATTATCATCTATGACTTTTCGAGACCAAGGTTAAATATACCAAGGCACATGG 1741
Query 1737 TTCCTCAGACAGAACACCCAACTATTTTCTCTGTCATACACTCTGATAACCCAACCGTCC 1796
| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 1742 TGCCTCAGACAGAACACCCAACTATATTCTCTGTCATAGACTCTGATAACCCAACCGTCC 1801
Query 1797 TTAATGTCTTGGTGGATGTGAGTGGTGTTGAGAGGCAAGTGCTTGCAGAGAACTATGAGG 1856
||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||
Sbjct 1802 TTAATGTCTTGGTGGATCAGAGTGGTGTTGAGAGGCAAGTGCTTGCAGAAAATTATGAGG 1861
Query 1857 TGGGAAAGGCGGTTGCATTTGGGAAAAGGCTCTCAAATCTGAAGGATGTTTACACTTTAG 1916
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1862 AGGGAAAGGCGGTTGCATTTGGGAAAAGGCTCTCAAATCTGAAGGAGGTTTACACTTTAG 1921
Query 1917 ACGGATACCGAATGTTTTTTCGTGGGCCAGTTCAGACTACTCTTCCTCCTCTTCCTCGTA 1976
|||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1922 ACGGATACAAAATGTTTTTTCGTGGGCCAGTTCAGACTACTCTTCCTCCTCTTTCTCGTA 1981
Query 1977 GATCTTCGCGACTCTGTGCTTCTTTTGATGACCAGATCAAGGATCTTGAAATAGAAGCCT 2036
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1982 GACCTTCGCGACTCTGTGCTTCTTTTGATGACCAGATCAAGGATCTTGAAATAGAGGCTT 2041
Query 2037 CAAAAGAACAAAACGAGATAAATCAATGCATTAGACGTAAGAGAGAGGCAGAGGAGAATC 2096
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 2042 CAAAAGAACAAAACGAGATAAATCAATGCATGAGACGTAAGAGGGAGGCAGAGGAGAATC 2101
Query 2097 TCGAGGAACTTGAGTCGAAAGTGCG-CACACTGAAGAAGCACCGCAGCCAAGCAGAGAAG 2155
| ||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||
Sbjct 2102 TTGAGGAACTTGAGTTGAAAGTGCGCCA-ACTGAAGAAGCACCGCAGCCAAGCAGAGAAG 2160
Query 2156 GTTTTGACGACAAAGGAACTTGAGATGCAGGATTTGAAGAATACAGTCGCTGCTGAGACC 2215
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 2161 GTTTTGACGACAAAGGAACTTGAGATGCACGATTTGAAGAATACAGTCGCTGCTGAGATC 2220
Query 2216 GAAGCATCACCTTCTTCAAGTGTTAATGAGCTTCAACTTGAAATCATGAAAGACCGAGAA 2275
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 2221 GAAGCATTACCTTCTTCAAGTGTTAATGAGCTTCAACGTGAAATCATGAAAGACCTAGAA 2280
Query 2276 GAGATAGATGAGAAAGAAGCTTTGCTTGAGAAGCTCCAAAACTGCTTGAAAGAAGCTGAG 2335
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2281 GAGATAGATGAGAAAGAAGCTTTCCTTGAGAAGCTCCAAAACTGCTTGAAAGAAGCTGAG 2340
Query 2336 CTTAAGGCTCATAAACTTACAGCTTCATTTGAGAACTTGCGTGAGTCAGCCAAGGGTGAA 2395
|| |||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 2341 CTAAAGGCTAATAAACTTACAGCTTTATTTGAGAACATGCGTGAGTCAGCCAAGGGTGAA 2400
Query 2396 ATTGATGCCTTTGAGGAAGCAGAGAATGAGCTAAAGAAGATTGAGAAAGACCTTCAGTCT 2455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2401 ATTGATGCCTTTGAGGAAGCAGAGAATGAGCTAAAGAAGATTGAGAAAGACCTTCAGTCT 2460
Query 2456 GCCGAAGCGGAGAAAATCCATTACGAGAACATAATGAAAAACAAGGTCCTACCTGATATT 2515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2461 GCCGAAGCGGAGAAAATCCATTACGAGAACATAATGAAAAACAAGGTCCTACCTGATATT 2520
Query 2516 AAGAATGCTGAGGCTAACTACGAGGAGCTTAAAAATAAGCGGAAGGAAAGTGACCAGAAG 2575
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2521 AAGAATGCTGAGGCTAACTACGAGGAGCTTAAAAATAAGCGAAAGGAAAGTGACCAGAAG 2580
Query 2576 GCCTCTGAAATTTGTCCTGAGAGTGAGATAGAATCTTTGGGTCCCTGGGATGGGAGTACT 2635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2581 GCCTCTGAAATTTGTCCTGAGAGTGAGATAGAATCTTTGGGTCCCTGGGATGGGAGTACT 2640
Query 2636 CCTGAGCAACTCAGTGCTCAGATTACCAGAATGAATCAGAGACTTCATCGAGAGAATCAG 2695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2641 CCTGAGCAACTCAGTGCTCAGATTACCAGAATGAATCAGAGACTTCATCGAGAGAATCAG 2700
Query 2696 CAGTTTTCTGAATCAATTGATGACCTTAGGATGATGTATGAGAGCCTAGAACGAAAGATT 2755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2701 CAGTTTTCTGAATCAATTGATGACCTTAGGATGATGTATGAGAGCCTAGAACGAAAGATT 2760
Query 2756 GCAAAGAAGCGCAAATCCTATCAAGACCATCGAGAAAAACTCATGGCCTGCAAAAATGCT 2815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2761 GCAAAGAAGCGCAAATCCTATCAAGACCATCGAGAAAAACTCATGGCCTGCAAAAATGCT 2820
Query 2816 TTAGATTCACGTTGGGGCAAGTTTCAAAGAAATGCATCTCTTCTTCGGCGCCAGTTAACA 2875
|||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2821 CTAGATTCACGGTGGGCCAAATTTCAAAGAAATGCATCTCTTCTTCGGCGCCAGTTAACA 2880
Query 2876 TGGCAATTCAACTCTCACTTGGGAAAGAAAGGTATCAGCGGACACATCAAAGTCAGTTAT 2935
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2881 TGGCAATTCAACGCTCACTTGGGAAAGAAAGGTATCAGCGGACACATCAAAGTCAGTTAT 2940
Query 2936 GAAGATAAAACTTTGTCCATAGAGGTTAAGATGCCTCAAGACGCAACAAGCAATGCCGTT 2995
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct 2941 GAAAATAAAACTTTGTCCATAGAGGTTAAAATGCCTCAAGACGCAACAAGCAATGTCGTT 3000
Query 2996 CGAGACACCAAAGGTCTTTCAGGCGGAGAACGTTCTTTCTCGACTTTATGTTTTGCATTA 3055
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 3001 CGAGACACCAAAGGTCTTTCAGGCGGAGAACGTTCTTTCTCAACTTTATGTTTTGCACTA 3060
Query 3056 GCTCTTCACGAAATGACGGAAGCCCCATTTCGAGCAATGGATGAGTTTGATGTGTTTATG 3115
||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 3061 GCTCTTCACGAGATGACAGAAGCCCCGTTTCGAGCAATGGATGAGTTTGATGTGTTTATG 3120
Query 3116 GATGCAGTCAGCCGGAAAATCAGCTTGGACGCACTGGTGGATTTTGCAATTGGACAAGGA 3175
||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 3121 GATGCAGTCAGTCGGAAAATTAGCTTGGACGCACTGGTGGATTTTGCAATTGGAGAAGGA 3180
Query 3176 TCGCAGTGGATGTTCATTACCCCTCATGATATCAGCATGGTCAAGTCGCACGAGAGGATA 3235
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3181 TCGCAGTGGATGTTCATCACCCCTCATGATATCAGCATGGTGAAGTCGCACGAGAGGATA 3240
Query 3236 AAGAAGCAGCAAATGGCTGCTCCTCGTTCTTGAAAACAAAATAAC-CTCTCCTTGTATAG 3294
||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 3241 AAGAAACAGCAAATGGCTGCTCCTCGTTCTTGAAAACAAAAAAAAACTCTCCTTGTATAG 3300
Query 3295 CTCCATAAAGGGCATCCTCGGCTTAGAGTCAATACTACAACGAGCTGATGGGAAGTTAGA 3354
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||
Sbjct 3301 CTCCATAAAGGGCATCCTCGGCTTTGAGTCAATACTACGACGAGCTGATGGGAAGTTTGA 3360
Query 3355 GAAGAGCTTTGTG--CC--G-TCCATGGTGTATTGATTTGATTTTACAGGTGCTGAGTGA 3409
|||||||||||| || | || ||||||||||||||||| ||||||||||||||||||
Sbjct 3361 GAAGAGCTTTGTCATCCATGGTC-ATGGTGTATTGATTTGAATTTACAGGTGCTGAGTGA 3419
Query 3410 GACCCttttttttttGTTTTCTCTCATTTCTGTTTATGACGGTTAGT-TATTGTCAAACT 3468
||||||||||| |||||||||||||||| |||||||| ||| | ||||||||||||
Sbjct 3420 GACCCTTTTTT----GTTTTCTCTCATTTCTTTTTATGACATTTA-TATATTGTCAAACT 3474
Query 3469 TTGATTATAAA-CTGTATTATATATCATTTT 3498
|||||| |||| |||||||||||||||||||
Sbjct 3475 TTGATTTTAAAACTGTATTATATATCATTTT 3505
> AT5G07660.1 | Symbols: SMC6A | structural maintenance of chromosomes
6A | chr5:2422839-2429912 FORWARD LENGTH=3177
Length=3177
Score = 2713 bits (1469), Expect = 0.0
Identities = 2602/3144 (83%), Gaps = 98/3144 (3%)
Strand=Plus/Plus
Query 174 TTGAGAATTTCATGTGCCATAGTAATCTCCAGATTGAATTTGGCGAGTGGGTTAATTTCA 233
||||||||||||||||||| ||||||||| ||||||| |||||||| ||||| |||||||
Sbjct 83 TTGAGAATTTCATGTGCCACAGTAATCTCGAGATTGAGTTTGGCGATTGGGTCAATTTCA 142
Query 234 TCACCGGCCAAAACGGAAGTGGTAAGAGTGCAATACTGACTGCTCTATGTGTTGCATTTG 293
|||| || ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||
Sbjct 143 TCACTGGTCAAAACGGAAGTGGTAAGAGTGCGATATTGACTGCTCTATGTGTTGCCTTTG 202
Query 294 GATGTCGAGCCAGAGGCACTCAGCGCGCTGCCAC-TCT-AAAGGATTTCATTAAAACTGG 351
||||||||||||| || ||||||||||| || || | | ||| |||||||||||||||||
Sbjct 203 GATGTCGAGCCAGGGGAACTCAGCGCGCCGCTACGT-TGAAA-GATTTCATTAAAACTGG 260
Query 352 ATGCAGCTATGCCGTTGTCCATGTAGAAATGAAAAA-CAATGGAGAGGATGCTTTTAAGC 410
||||||||||||| |||| |||| ||| ||||||| ||| |||||||||||||| ||||
Sbjct 261 ATGCAGCTATGCCCTTGTTTATGTCGAACTGAAAAACCAA-GGAGAGGATGCTTTCAAGC 319
Query 411 CTGAAATTTATGGTGA-AGTTATAATTATCGAACGCAGGATAACTGATTCTACTACATCT 469
||||||| |||||||| | | | ||||| ||||||||||| ||||||| |||| | |
Sbjct 320 CTGAAATATATGGTGATA-CTCTGATTATTGAACGCAGGATCTCTGATTCCACTA-GTTT 377
Query 470 -ACCGTTCTCAAAGATTATCTAGGaa-aaaaaGTAAGTA-ACAAAAGGGAGGAGCTACGG 526
|| |||||||| ||| ||| ||||| ||||| || || | ||| |||||||||||||
Sbjct 378 AACGGTTCTCAAGGATCATCAAGGAAGAAAAA-TATCTAGCCGAAA-GGAGGAGCTACGG 435
Query 527 GAACTTGTTGAACATTTTAATATTGATGTTGA-AAACCCGTGTGTGGTAATGAGTCAAGA 585
||||| |||||||||| ||||||||||||||| || ||| |||||| |||||||||||||
Sbjct 436 GAACTAGTTGAACATTATAATATTGATGTTGAGAATCCC-TGTGTGATAATGAGTCAAGA 494
Query 586 CAAAAGCAGGGAGTTCTTACATTCTGGAAATGACAAAGATAAATTCAAGTTCTTTTTTAA 645
||| ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||
Sbjct 495 CAAGAGCAGGGAGTTCTTACATTCTGGTAACGACAAAGATAAATTCAAGTTCTTTTATAA 554
Query 646 GGCAACCCTTCTTCAGCAAGTCAATGATCTTCTCCAAAGTA-T-CTACGAACACTTGAAA 703
||||||||||||||||||||| ||||| |||| ||||||| | ||| || | |||||
Sbjct 555 AGCAACCCTTCTTCAGCAAGTCGATGATATTCTTCAAAGTATTGGTAC-AA-AGTTGAAT 612
Query 704 AATGCAACTGCTATAGTCGATGA-ATTGGAGAACACAATTAAACCAATAGAAAAGGAGAT 762
||||| |||| | | ||||| | ||||||| || || ||||||||||||||||||||
Sbjct 613 TCTGCAAATGCTCTTTTGGATGAGA-TGGAGAAGACCATAAAACCAATAGAAAAGGAGAT 671
Query 763 CAGTGAGTTGCGTGGAAAGATAAAGAATATGGAACAAGTTGAAGAAATAGCTCAA-AAGT 821
|| |||||||| || ||||||||||||||||||||| |||||||||||| ||||| | ||
Sbjct 672 CAATGAGTTGCTTGAAAAGATAAAGAATATGGAACATGTTGAAGAAATAACTCAACAGGT 731
Query 822 TGCAGCAGTTGAAGAAGAAACTGGCTTGGTCATGGGTATATGATGTGGATAGGCAGCTCC 881
| | ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 732 T-CTGCATTTGAAAAAGAAACTAGCTTGGTCATGGGTATATGATGTGGATAGGCAGCTCA 790
Query 882 AGGAACAGACTGAGAAGATTGTGAAGCTT-AAAGAACGTA-TACCGACTTGCCAAGCTAA 939
|||| |||| ||||||||| ||||| || |||||||| | | || ||||| ||| |||
Sbjct 791 AGGAGCAGAATGAGAAGATCGTGAAA-TTCAAAGAACG-AGTGCCAACTTGTCAAAATAA 848
Query 940 AATAGATTGGGAACTGGGTAAAGTAGAATCGTTAAGGGATA--CATTGACCAAGAAGAAA 997
||| ||| || |||||||| | || ||||| ||||||| || | || ||| ||||||||
Sbjct 849 AATTGATCGGAAACTGGGTGAGGTGGAATCTTTAAGGG-TAAGC-TTAACCGAGAAGAAA 906
Query 998 GCTCAAGTTGCATGTCT-GATGGATGAATCAACTGCAATGAAGAGAGAGATAGAGAGTTT 1056
||||||||||| || || ||| ||||| |||||||| |||||||||||| ||||| ||||
Sbjct 907 GCTCAAGTTGCCTG-CTTGATAGATGAGTCAACTGCGATGAAGAGAGAGCTAGAGTGTTT 965
Query 1057 TCACCAATCAGCGAAGACGGCTGTACGAGAAAAGATTGCTCTACAAGAAGAATTCAATCA 1116
| |||||| ||||| ||||| | |||| ||||||||| || ||||||||| | ||||
Sbjct 966 GCGGCAATCAATGAAGAAGGCTGCAAGAGAGAAGATTGCTTTAGAAGAAGAATACCATCA 1025
Query 1117 TAAGTGCAATTATGTTCAAAAGATTAAGGATCGTGTTAGAAGGCTTGAACGGCAGGTTGG 1176
|||||||| | | |||| |||||||||||||||||||| ||||||||||| ||| |||
Sbjct 1026 TAAGTGCAGTAACATTCAGAAGATTAAGGATCGTGTTAGGAGGCTTGAACGACAGATTGA 1085
Query 1177 AGATATCAATGAACA-GACAATGAAAAA-CACACAGG-CTGAACAATCTGAAATCGA-GG 1232
|||||| |||||| | ||| || || || |||||||| | ||||||||||||||||| ||
Sbjct 1086 AGATATTAATGAA-ATGACTAT-AAGAAGCACACAGGTC-GAACAATCTGAAATCGAAGG 1142
Query 1233 AGAAACTAAAATATTTGG-AGCAGGAGGTTGAGAAAGTTGAAACCTTGCTTTTCAGATTG 1291
| ||||| || | ||| || || |||||||||| | |||| | ||| ||| ||| |||
Sbjct 1143 A-AAACTGAACCAATTGACAGTAG-AGGTTGAGAAGGCTGAATCATTGGTTTCCAGTTTG 1200
Query 1292 AAAGAGGAAGAGAAC-TGCTTACTGGAAAAAGCGTTTGATGGGAGGAAAG-AGATAG-AA 1348
|||||||| |||||| || | | |||||||||| | | || ||| ||| ||| || ||
Sbjct 1201 AAAGAGGAGGAGAACATGGTAA-TGGAAAAAGCATCAGCCGG-AGGGAAGGAGA-AGGAA 1257
Query 1349 CACATCGAGGATATGATTAAAAACCATCAAAAGAGGCAAAGATTCGT-AACGTCGAACAT 1407
||||| ||||| ||||||| | ||||| |||||| |||||| | | |||| || ||||
Sbjct 1258 CACATAGAGGAGATGATTAGAGACCATGAAAAGAAACAAAGAAACATGAACG-CGCACAT 1316
Query 1408 TAATGATCTGAAGAAACATCAAACAAACAAGGTTACTGCATTTGGAGGGGACAGAGTCAT 1467
|||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||
Sbjct 1317 CAATGATCTGAAGAAACATCAAACAAATAAGGTTACCGCATTTGGAGGGGACAAAGTCAT 1376
Query 1468 TAATCTTCTGC-AGGCTATTGAGAGAAATCATCGTAGATTCAGAAAA-CCACCAATTGGT 1525
||||||| | | || | ||||||||| |||| || ||||| | ||| ||||||||||||
Sbjct 1377 TAATCTTTTACGAG-CGATTGAGAGACATCACCGCAGATTTA-AAATGCCACCAATTGGT 1434
Query 1526 CCTATTGGCTCC-CATGTGACTTT-AGTCAATGGCAATAAATGGGCTTCTACAGTTGAAC 1583
|| ||||| | | |||||||| || | ||||||| |||| |||||||||| |||||||||
Sbjct 1435 CCGATTGG-TGCTCATGTGACATTGA-TCAATGGTAATAGATGGGCTTCTGCAGTTGAAC 1492
Query 1584 AAGCTCTTGGAAACCTATTAAATGCCTTCATTGTGACTGATCATAAAGATTC-GCTCACT 1642
|||||||||| ||||| | |||||||| || ||||| ||||||||||||| | | ||
Sbjct 1493 AAGCTCTTGGCAACCTCCTGAATGCCTTTATAGTGACCGATCATAAAGATTTAGTTG-CT 1551
Query 1643 CTAAGAGGCTGTGCAAATGAAGCCAATTATAGA-AACCTCAAGATTATCATCTATGACTT 1701
| ||| ||||| ||| ||||| || |||| | || || ||||||||||||||||||||
Sbjct 1552 TTGCGAGACTGTGGAAAGGAAGCAAAATATA-ACAATCTAAAGATTATCATCTATGACTT 1610
Query 1702 TTCGAGACCAAGGTT-GAATATACCAAGGCACATGATTCCTCAGACAGAACACCCAACTA 1760
||| ||||||||||| || |||||||||||||||||||||||| ||||||||||||||||
Sbjct 1611 TTCAAGACCAAGGTTAGA-TATACCAAGGCACATGATTCCTCAAACAGAACACCCAACTA 1669
Query 1761 TTTTCTCTGTCATACACTCTGATAACCCAACCGTCCTTAATGTCTTGGTGGATGTGAGTG 1820
|| |||||||| | |||||||| || | || || ||||| ||||||||||||||||||
Sbjct 1670 TTCTCTCTGTCTTGCACTCTGAGAATACTACTGTTCTTAACGTCTTGGTGGATGTGAGTT 1729
Query 1821 GTGTTGAGAGGCAAGTGCTTGCAGAGAACTATGAGGTGGGAAAGGCGGTTGCATTTGGGA 1880
| || |||||||| ||||||||||| || |||||||| || ||| |||| |||| ||
Sbjct 1730 GCGTAGAGAGGCATGTGCTTGCAGAAAATTATGAGGTTGGCAAGATTATTGCCTTTGAGA 1789
Query 1881 AAAGGCTCTCAAATCTGAAGGATGTTTACACTTTAGACGGATACCGAATGTTTTTTCGTG 1940
|||||||||| ||||||||||||||| |||| |||| |||||||||||||||| ||||
Sbjct 1790 GAAGGCTCTCACATCTGAAGGATGTTTTCACTATAGATGGATACCGAATGTTTTCCCGTG 1849
Query 1941 GGCCAGTTCAGACTACTCTTCCTCCTCTTCCTCGTAGATCTTCGCGACTCTGTGCTTCTT 2000
|||| |||||||| || |||||||| | |||||| ||| || | || | ||||||||||
Sbjct 1850 GGCCTGTTCAGACAACCCTTCCTCCCCGTCCTCGAAGACCTACTAGATTGTGTGCTTCTT 1909
Query 2001 TTGATGACCAGATCAAGGATCTTGAAATAGAAGCCTCAAAAGAACAAAACGAGATAAATC 2060
|||||||||| |||||||||||||||||||| ||||||| |||||||| |||||| |
Sbjct 1910 TTGATGACCAAATCAAGGATCTTGAAATAGAGGCCTCAAGAGAACAAAGTGAGATACAGG 1969
Query 2061 AATGCATTAGACGTAAGAGAGAGGCAGAGGA-GAATCTCGAGGAACTTGAGTCGA-AAGT 2118
|||| | ||| ||||| |||||||| | ||||||||||| ||||| || | || |
Sbjct 1970 AATGTAGGGGACAAAAGAGGGAGGCAGAA-ATGAATCTCGAGGGTCTTGAATCAACAA-T 2027
Query 2119 GCGCACACTGAAGAAGCACCGCAGCCAAGC-AGAGAAGGTTTTGACGACAAAGGAACTTG 2177
||||| |||||||||||| |||| |||| | |||||| | |||||| | ||||||||||
Sbjct 2028 GCGCAGACTGAAGAAGCAACGCACCCAA-CTAGAGAAAGATTTGACAAGGAAGGAACTTG 2086
Query 2178 AGATGCAGGATTTGAAGAATACAGTCGCTGCTGAGACCGAAGCATCACCTTCTTCAAGTG 2237
| ||||||||| |||| ||| |||||||| |||| ||| ||||||||||| | |||||||
Sbjct 2087 AAATGCAGGATCTGAAAAATTCAGTCGCTTCTGAAACCAAAGCATCACCTACATCAAGTG 2146
Query 2238 TTAATGAGCTTCAACTTGAAATCATGAAAGACCGAGAAGAGATAGATGAGAAAGAAGCTT 2297
||||||||||||| || |||||||||||| || | |||||||||| ||||||||| | |
Sbjct 2147 TTAATGAGCTTCATCTAGAAATCATGAAATTCCAAAAAGAGATAGAGGAGAAAGAATCCT 2206
Query 2298 TGCTTGAGAAGCTCCAAAACTGCTTGAAAGAAGCTGAGCTTAAGGCTCATAAACTTACAG 2357
|||| || || || ||| ||| |||||| ||||| || || |||||| || |||||| ||
Sbjct 2207 TGCTAGAAAAACTTCAAGACTCCTTGAAGGAAGCCGAACTAAAGGCTAATGAACTTAAAG 2266
Query 2358 CTTCATTTGAGAACTTGCGTGAGTCAGCCAAGGGTGAAATTGATGCCTTTGAGGAAGCAG 2417
|||||| ||| ||||| |||||| ||||||||||||||||| ||| ||||| |||| |
Sbjct 2267 CTTCATATGAAAACTTATATGAGTCCGCCAAGGGTGAAATTGAAGCCCTTGAGAAAGCTG 2326
Query 2418 AGAATGAGCTAAAGAAGATTGA-GAAAGACCTTCAGTCTGCCGAAGCGGAGAA-AATCCA 2475
|| ||||||||||| ||| || || || || || ||||| ||| ||||||| || |||
Sbjct 2327 AGGATGAGCTAAAGGAGAAAGAAGAT-GAACTCCATTCTGCAGAAACGGAGAAGAA-CCA 2384
Query 2476 TTACGAGAACATAATGAAAAACAAGGTCCTACCTGATATTAAGA-ATGCTGAGGCTA-AC 2533
||| ||| | |||||||| |||||||| |||| || ||||| | | |||||| ||| |
Sbjct 2385 TTATGAGGATATAATGAAGGACAAGGTCTTACCCGAGATTAA-ACAGGCTGAGACTATA- 2442
Query 2534 TACGAGGAGCTTAAAAAT-AAGCGGAAGGAAAGTGACCAGAAGGCCTCTGA-AATTTGTC 2591
|| |||||||| ||| | || ||| ||||||| || |||||||||| | ||||||||
Sbjct 2443 TATAAGGAGCTTGAAA-TGAAACGGCAGGAAAGCAACAAGAAGGCCTCC-ATAATTTGTC 2500
Query 2592 CTGAGAGTGAGATAGAATCTTTGGGTCCCTGGGATGGGAGTACTCCTGAGCAACTCAGTG 2651
|||||||||||||| || |||||||||| ||||||||| |||||| ||| || ||||
Sbjct 2501 CTGAGAGTGAGATAAAAGCTTTGGGTCCTTGGGATGGGCCAACTCCTTTGCAGCTTAGTG 2560
Query 2652 CTCAGATTACCAGAATGAATCAGAGACTTCATCGAGAGAATCAGCAGTT-TTCTGAATCA 2710
||||||||| || ||| ||||| || || | ||||||||| || | || ||||||||||
Sbjct 2561 CTCAGATTAACAAAATAAATCATAGGCTGAAGCGAGAGAATGAGAA-TTATTCTGAATCA 2619
Query 2711 ATTGATGACCTTAGGATGATGTATGAGAGCCTA-GAAC-GAAAGATTGCAAAGAAGCGCA 2768
|| |||||||| ||||| ||| | | | | | |||| ||| ||||| ||||| ||||
Sbjct 2620 ATCGATGACCTCAGGATTATGCACGGG-GAAAAAGAACAGAA-GATTGGGAAGAAACGCA 2677
Query 2769 AATCCTATCAAGACCA-TCGAGAAAAACTCATGGCCTGCAAAAATGCTTTAGATTCACGT 2827
|| | || ||| | | |||||||||||||| || ||||||| |||| |||| |||||
Sbjct 2678 AAACTTA-CAAAAGCTGTCGAGAAAAACTCAAGGTCTGCAAAGATGCAGTAGACTCACGG 2736
Query 2828 TGGGGCAAGTTTCAAAGAAATGCATCTCTTCTTCGGCGCCAGTTAACATGGCAATTCAAC 2887
||| |||| | ||||||||| | |||||| ||| | ||||| ||||||||||||
Sbjct 2737 TGGAACAAGCTCCAAAGAAATAAAGATCTTCTGAAGCGAGAATTAACTTGGCAATTCAAC 2796
Query 2888 TC-TCACTTGGGAAAGAAAGGTATCAGCGGACACATCAAAGTCAGTTATGAAGATAAAAC 2946
| ||| || ||||||||||||||||| ||| | |||| |||| ||||||||| |||||
Sbjct 2797 -CATCATTTAGGAAAGAAAGGTATCAGTGGAAATATCAGAGTCTCTTATGAAGACAAAAC 2855
Query 2947 TTTGTCCATAGAGGTTAAGATGCCTCAAGACGCAACAAGCAATGCCGTTCGAGACACCAA 3006
||||||||||||||| |||||||||||||| ||||||| || ||| |||||||| || |
Sbjct 2856 TTTGTCCATAGAGGTAAAGATGCCTCAAGATGCAACAAACAGTGCTGTTCGAGATACTAG 2915
Query 3007 AGGTCTTTCAGGCGGAGAACGTTCTTTCTCGACTTTATGTTTTGCATTAGCTCTTCACGA 3066
||| |||||||| || ||||| ||||||||||||||||| || ||||||||||||| ||
Sbjct 2916 AGGACTTTCAGGTGGGGAACGGTCTTTCTCGACTTTATGCTTCACATTAGCTCTTCA-GA 2974
Query 3067 A-ATGACGGAAGCCCCATTTCGAGCAATGGATGAGTTTGATGTGTTTATGGATGCAGTCA 3125
| ||||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||| |
Sbjct 2975 ATATGACTGAAGCCCCAATTCGAGCAATGGACGAGTTTGATGTGTTTATGGACGCAGTTA 3034
Query 3126 GCCGGAAAATCAGCTTGGACGCACTGGTGGATTTTGCAATTGGA-CAAGGATCGCAGTGG 3184
|| ||||||||||||| ||| || || | ||||| ||| ||| | ||||| || ||||||
Sbjct 3035 GCAGGAAAATCAGCTTAGACACATTGATTGATTTCGCA-TTGAAACAAGGTTCACAGTGG 3093
Query 3185 ATGTTCATTACCCCTCATGATATCAGCATGGTCAAGTCGCACGAGAGGATAAAGAAGCAG 3244
|||||||| || ||||||||||| || ||||| ||||| ||||||| ||||||||||||
Sbjct 3094 ATGTTCATCACTCCTCATGATATAAGTATGGTGAAGTCACACGAGAAGATAAAGAAGCAA 3153
Query 3245 CAAATGGCTGCTCCTCGTTCTTGA 3268
|||||||||||||| |||||||||
Sbjct 3154 CAAATGGCTGCTCCACGTTCTTGA 3177
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 174129459153
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5