BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496317
Length=1286
Score E
Sequences producing significant alignments: (Bits) Value
AT5G61540.1 | Symbols: | N-terminal nucleophile aminohydrolase... 1941 0.0
> AT5G61540.1 | Symbols: | N-terminal nucleophile aminohydrolases
(Ntn hydrolases) superfamily protein | chr5:24744947-24747524
FORWARD LENGTH=1394
Length=1394
Score = 1941 bits (1051), Expect = 0.0
Identities = 1149/1197 (96%), Gaps = 4/1197 (0%)
Strand=Plus/Plus
Query 1 GAGCTCACGGCCATGGCGAGAATCGATCTTTTGATTTTTGTTTCTACTCTTCTTCTGTTT 60
|||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 36 GAGCTCACAGCCATGGCGAGAAGCGATGTTTTGATTTTTGTTTCTACTCTTCTTCTGTTT 95
Query 61 CTGCCTCTACTTACGGTAGCTGATGCGGAATTGGTGAAATCTGAAAAGTTTCCGGTAGTG 120
||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 96 CTGTCTCTGCTTACGGTAGCTGATGCGGAATTGGTGAAATCTGACAAGTTTCCGGTAGTG 155
Query 121 GTGAGTACTTGGCCTTTCCTTGAGGCCGTTAGAGCTGCTTGGAGAGCAGTTGATAGTGGG 180
||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||
Sbjct 156 GTGAGTACTTGGCCTTTCCTTGAAGCTGTTAGAGCTGCTTGGAGAGCAGTTGATAATGGG 215
Query 181 AGTTCTGCAGTAGAAGCTGTTGTGGAAGGTTGTTCTGCTTGCGAGGAACTTCGTTGTGAC 240
|| |||||||| ||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct 216 AGCTCTGCAGTGGAAGCTGTTGTTGAAGGTTGTTCTGCTTGTGAAGAACTTCGTTGTGAC 275
Query 241 GGTACAGTTGGGCCTGGAGGAAGTCCGGATGAGAATGGTGAGACCATGATTGATGCTTTA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 276 GGTACAGTTGGGCCTGGAGGAAGTCCGGATGAGAATGGTGAGACCATGATTGATGCTTTA 335
Query 301 GTCATGGATGGGGTGACTATGGAGGTTGGAGCGGTTGCTGCAATGCGGTATGTTAAAGAC 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 336 GTCATGGATGGGGTGACTATGGAGGTTGGAGCTGTTGCTGCAATGCGGTATGTTAAAGAC 395
Query 361 GGTATAAGAGCTGCACTTCTAGTGATGAAATACTCTCAACACACATTGCTCT-CCGGAGA 419
|||||||||||||||| ||||||||||||||||||||||||||| ||||| | |||||||
Sbjct 396 GGTATAAGAGCTGCACATCTAGTGATGAAATACTCTCAACACACGTTGCT-TGCCGGAGA 454
Query 420 AGGAGCATCAGCATTTTCAATCTCCATGGGTCTACCCGGACCCATGAACCTAAGCTCCCC 479
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 455 AGGAGCATCAGCATTTGCAATCTCCATGGGTCTCCCCGGACCCATGAACCTAAGCTCCCC 514
Query 480 TGAATCTGTAAAGAAGTGGTCGGACTGGAAAGAGAATCAATGTCAACCCAATTTCAGGAA 539
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 515 TGAATCTGTAAAGAAGTGGTCGGACTGGAAAGAGAATCAGTGTCAACCCAATTTCAGGAA 574
Query 540 GAATGTAGTCCCTGCAAATGACTGTGGACCTTACAAGCCAAACAATGGTGCTATGAATGT 599
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 575 GAATGTAGTCCCCGCAAATGACTGTGGACCTTACAAGCCAAACAATAGTGCTATGAATGT 634
Query 600 TTCTGGATACAAACGCACTGAATCTTGCGAGATGGGGGAGATTGAGTATAGACCTCCTCT 659
|| || | ||||| |||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 635 TTTTGTAGACAAAAGCACTGAATCTTGCGAGATGGGGGCGATTGAGTATAAACCTCCTCT 694
Query 660 TGTTGGTCCTCACAATCACGATACCATATCGATGGCTGTCATTGACAAAATGGGGCATAT 719
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 695 TGTTGGTCCTCACAATCACGATACGATATCGATGGCTGTCATTGACAGAATGGGGCATAT 754
Query 720 AGCTGTTGGGACATCGACCAATGGAGCCACATATAAAATTCCTGGAAGGGTTGGTGATGG 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 AGCTGTTGGGACATCGACCAATGGAGCCACATATAAAATTCCTGGAAGGGTTGGTGATGG 814
Query 780 GCCTATCGTCGGTTCATCAGCCTACGCTGATGATGAAGTAGGTGGATGTGGTGCAACTGG 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCCTATCGTCGGTTCATCAGCCTACGCTGATGATGAAGTAGGTGGATGTGGTGCAACTGG 874
Query 840 AGATGGGGACACCATGATGCGCTTCCTCCCTTGTTACCAAGTTGTGGAGAGCATGAGACA 899
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 875 AGATGGTGACACCATGATGCGCTTCCTCCCTTGTTACCAAGTTGTGGAGAGCATGAGACA 934
Query 900 AGGAATGAAACCAGAAGAAGCTGCTAAAGACGCAATCTCGAGAATCGCAAGGAAGTTTCC 959
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 935 AGGAATGAAACCAGAAGAAGCTGCTAAAGATGCAATCTCGAGAATCGCAAGGAAGTTTCC 994
Query 960 AGATTTCGTGGGAGCCGTTGTGGCTGTTGACAAGAACGGGTCTCACTCAGGAGCTTGCCA 1019
||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |
Sbjct 995 AGATTTCGTGGGAGCAGTTGTGGCTGTTGACAAGAACGGATCTCACGCAGGAGCTTGCTA 1054
Query 1020 TGGCTGGACGTTTCAGTACTCAGTCCAGAACCCTGACATGGACGATGTTCAAGTCTTCAC 1079
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||
Sbjct 1055 TGGCTGGACGTTTCAGTACTCAGTCCAAAACCCTGACATGAACGATGTTCAAGTCTTTAC 1114
Query 1080 AGTGCTTCCATGAAACCAG-ATCATAGGATTGAAGGTTTCTAAAAGTGATTGTAGTAACA 1138
||| |||||||||||| || ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1115 AGTTCTTCCATGAAAC-AGGATCATAGGATTGAAGGTGTCTAAAAGTGATTGTAGTAACA 1173
Query 1139 ACAAAGAAACGGCACGAAGTTCATGTCTGGAAATATGGAATGGCAAGCTCGTTTGGA 1195
|||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1174 ACAATGAAACGGCAAGAAGTTCATGTCTGGAAATACGGAATGGCAAGCTCGTTTGGA 1230
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63252686700
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5