BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496336
Length=2775
Score E
Sequences producing significant alignments: (Bits) Value
AT5G61690.1 | Symbols: ATATH15, ATH15 | ABC2 homolog 15 | chr5:... 4540 0.0
AT5G61730.1 | Symbols: ATATH11, ATH11 | ABC2 homolog 11 | chr5:... 1746 0.0
AT3G47730.1 | Symbols: ATATH1, ATH1, ABCA2 | ATP-binding casset... 1184 0.0
> AT5G61690.1 | Symbols: ATATH15, ATH15 | ABC2 homolog 15 | chr5:24789495-24793487
REVERSE LENGTH=2760
Length=2760
Score = 4540 bits (2458), Expect = 0.0
Identities = 2673/2776 (96%), Gaps = 17/2776 (1%)
Strand=Plus/Plus
Query 1 ATGATTTTGCAAGAAGGCTTGCCGCTTCTCTACCAGCAGTTCACGGCGTTGTTCGGGAAG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATTTTGCAAGAAGGCTTGCCGCTTCTCTACCAGCAGTTCACGGCGTTGTTCGGGAAG 60
Query 61 AATCTATTGCTTTCATGGCGGAACAAGAGAGCCACGTGTCTTCAACTCTTCTCTTCATTC 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 61 AATCTATTGCTTTCATGGCGGAACAAGAGAGCCACGTGTCTTCAAATCTTCTCTTCATTC 120
Query 121 TTCTTCATCCTTGTCATCTTTTGTATAGAGGAAGCCATGAAGGCAAGCGACGCATCCTCA 180
|||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 121 TTCTTCATCCTTCTCATCTTTTGTATAGAGGAAGCCATGAAAGCAAGCGACGCATCCTCG 180
Query 181 ACAGCGTACAAGAATATCACTGATCCTACACTATTGGTTTCCCCACCGATTCTTCCTTGT 240
| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 181 AGTGCGTACAAGAATATCACTGATCCTACACTATTGGTATCCCCACCGATTCTTCCTTGT 240
Query 241 GAGGACAAGTTCTTTGTGAAGCTTCCTTGCTATGACTTCGTGTGGAGTGGGAACCATAGT 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 241 GAGGACAAGTTCTTTGTGAAGCTTCCTTGCTATGACTTTGTGTGGAGTGGGAACAATAGT 300
Query 301 CGCCGCGTTACTGATATCGTCTCTGCAATTATGGCTAACAATCCAGGGAGACCAATTCCA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CGCCGCGTTACTGATATCGTCTCTGCAATTATGGCTAACAATCCAGGGAGACCAATTCCA 360
Query 361 ACCAACAAGGTTCAATCGTTCAAGGAGCCTGATGAGGTAGATGCATGGCTTCTGTCACAT 420
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 361 ACCAACAAGGTTCAGTCGTTCAAGGAGCCTGATGAGGTAGATACATGGCTTCTGTCACAT 420
Query 421 CCCTTGCAAGTTCCAGGAGCTTTGCATTTTGTGGAAAGGAATGCTTCAGTAATCAGCTAT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 CCCTTGCAAGTTCCAGGAGCTTTGCATTTTGTGGAAAGGAATGCTTCAGTAATCAGCTAT 480
Query 481 GGTATTCAAACAAATTCTTCCTCGGAGAGAAAACGTGGTCAGACTGAAGATCCTACGTTT 540
||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 481 GGTGTTCAAACAAATTCTTCATCGGAGAGTAAACGTGGTCAGACTGAAGATCCTACGTTT 540
Query 541 AAGTTTCTTGTTCCTCTTCAAGTCGCTGCAGAGCGTGAAATCGCAAGGTCCTTAATTGGA 600
||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 541 AAGTTCCTTGTTCCTCTTCAAGTCGCTGCAGAGCGTGAAATCGCAAGGTCTTTACTTGGA 600
Query 601 GATCCAGATTTTGGTTGGGGTTTGGGATTTAAGGAATTTGCACGACCAGCTATTATAACT 660
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 601 GATCCAAATTTTGGTTGGGGTTTGGGATTTAAGGAATTTGCAAGACCAGCTATTATAACT 660
Query 661 GAAACTACCTCTGCACTCTCAGTCATGGGACCAGTGTTCTTCCTTGCTTTCTCCATGTTT 720
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 661 GAAACTACCTCTGCACTCTCAGTCATGGGACCAGTGTTCTTTCTTGCTTTCTCCATGTTT 720
Query 721 GGTTTTGTTCTCCAACTCGGTTCCCTGGTTACCGAGAAAGAGCTCAAACTTCGGCAGGCA 780
||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||
Sbjct 721 GGTTTTGTTCTCCAACTCGGTGCCCTGGTCACCGAGAAAGAGCTAAAACTTCGGCAGGCA 780
Query 781 ATGACAATGATGGGTGTTTATGATTCTGCATATTGGTTGTCATGGCTCTTATGGGAAGGA 840
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 781 ATGACAATGATGGGTGTTTATGATTCTGCATATTGGTTGTCATGGCTAACCTGGGAAGGA 840
Query 841 ATCCTTACTTTTGTCTCCTCACTTTTATTGGTCCTCTTTGGAATGATATTCCGGTTTGAT 900
|||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 841 ATCCTTACCCTTGTCTCCTCACTTTTCTTGGTCCTCTTTGGAATGATATTCCGCTTTGAT 900
Query 901 TTTTTCTTGAAGAACAGTTTTGTTCTTGTCTTCCTACTTTTCTTGCTCTTTCAGTTTAAT 960
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 901 TTTTTCTTGAAGAACAGTTTTGTTCTTGTCTTCCTACTTTTCTTGCTTTTTCAGTTTAAT 960
Query 961 ATGATTGGCCTAGCATTTGCGCTATCATCTATTATTAGCAAATCATCTTCGGCAACAACC 1020
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 961 ATGATTGGCCTAGCATTTGCGCTATCATCTATCATTAGCAAATCATCTTCGGCAACAACT 1020
Query 1021 GTCGGTTTCCTTGTGTTTTTGATTGGTTTTATAACACAGATTGTATCAGCTACTGGATTC 1080
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1021 GTCGGTTTCCTTGTGTTTTTGATTGGTTTTATAACACAGTTTGTATCAGCTACTGGATTC 1080
Query 1081 CCTTATTCCAGCGCTTATGCGGTTTCTCGTCGGGTGATGTGGTCTCTTTTTCCACCAAAC 1140
|||||||||||| | ||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct 1081 CCTTATTCCAGCTCATATGCAGTTTCTCGCCGGGTGATGTGGTCTCTTTTTCCACCCAAC 1140
Query 1141 ACTTTTTCTGCGGGACTTAAGCTTCTTCTTGATGCAACCTCAACTCCCAAAAGCTCTGGA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 ACTTTTTCTGCGGGACTTAAGCTTCTTCTTGATGCAACCTCAACTCCCAAAAGCTCTGGA 1200
Query 1201 ATCAGTTGGAGTAATAGAGCCAACATTATCTACCAGTGGCTCCTTGGGACATTCCTATTC 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 ATCAGTTGGAGTAATAGAGCCAACATTATCTACCAGTGGCTCCTTGGGACATTCCTATTC 1260
Query 1261 TGGTTTGTTCTGGCTATCTACTTTGACAATATTATTCCCAACTCGTCCGGTGTAAGAAAA 1320
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 1261 TGGTTTGTTCTGGCTATCTACTTTGACAATATTATTCCCAACGCCTCCGGTGTAAGAAAA 1320
Query 1321 CCGATCTTCTACTTTTTAGCACCTGGTTATTGGACTGGCAAAGGGGGCAACAAAGTGGAA 1380
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1321 CCGATCTTCTACTTTTTAGCACCTGGTTATTGGACTGGCAAAGGAGGCAACAAAGTGGAA 1380
Query 1381 GTTCCACCCGTGGAGCATAATACGCCAGATGACAAAGATGTGCTTGAAGAAGAGACAGAA 1440
||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1381 GTTCCACTAGTAGAGCATAATACGCCAAATGACAAAGATGTGCTTGAAGAAGAGACAGAA 1440
Query 1441 GTTAAACAACAAGCAATGGATGGAATAGTTGATCCTAACATTGCAGTTCAGATACATGGT 1500
|||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||
Sbjct 1441 GTTAAACAACAAGCAATGGACGGAATAGCTGATCCTAACATTGCAGTTCAAATACATGGT 1500
Query 1501 CTTGCAAAGACATATCCTGGGACTACAAAGCTTGGATGCTGCAAATGCACCAAAACTTCG 1560
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1501 CTTGCAAAGACATATCCTGGAACTACAAAGCTTGGATGCTGCAAATGCACCAAAACTTCG 1560
Query 1561 CCTTTTCATGCTGTAAAGGGTTTGTGGATGAATATTGCCAAAGATCAGTTGTTTTGTCTT 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1561 CCTTTTCATGCTGTAAAGGGTTTGTGGATGAATATTGCCAAAGATCAGTTGTTTTGTCTT 1620
Query 1621 CTTGGACCTAATGGCGCGGGAAAAACAACTACTATTAGTTGTTTGACTGGCATAAATCCA 1680
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1621 CTTGGACCTAATGGCGCGGGGAAAACAACTACTATTAGTTGTTTGACTGGCATAAATCCA 1680
Query 1681 GTTACTGGTGGTGATGCTCTTATATATGGAGACTCCATAAGAAGTTCCGTGGGTATGTCT 1740
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1681 GTTACTGGTGGTGATGCTCTTATATATGGAGACTCCATAAGAAGTTCTGTGGGTATATCT 1740
Query 1741 AACATTCGTAAAATGATAGGAGTGTGTCCTCAGTTTGATATTCTTTGGGATGCTTTGTCT 1800
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1741 AACATTCGCAAAATGATAGGAGTATGTCCTCAGTTTGATATTCTTTGGGATGCTTTGTCT 1800
Query 1801 AGTGAAGAACACCTCCACCTCTTTGCTAGCATCAAAGGATTGCCACCAGCATCGATCAAA 1860
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1801 AGTGAACAACACCTCCACCTCTTTGCTAGCATCAAAGGGTTGCCACCAGCATCGATCAAA 1860
Query 1861 TCGACTGCTGAGAAGTTACTGGCGGATGTAAAACTGACAGGAGCTGCGAAAGTTAGAGCA 1920
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1861 TCGACTGCTGAGAAGTTACTGGCGGATGTAAAACTGACAGGAGCGGCGAAAGTTAGAGCA 1920
Query 1921 GGAAGTTATAGTGGTGGAATGAAACGTCGACTCAGTGTTGCGGTAGCACTTATCGGTGAT 1980
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1921 GGAAGTTACAGTGGTGGAATGAAACGTCGACTCAGTGTTGCGGTAGCACTTATCGGCGAT 1980
Query 1981 CCCAAGCTGACAACTGGCATGGACCCTATCACGAGGAGACATGTGTGGGACATTATACAA 2040
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1981 CCCAAGCTGACTACTGGCATGGACCCTATCACGAGGAGACATGTGTGGGACATTATACAA 2040
Query 2041 GAGTCAAAGAAAGGTCGTGCCATCATACTAACGACGCATTCTATGGAAGAAGCTGATATT 2100
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2041 GAGTCAAAGAAAGGTCGTGCCATCATACTAACGACGCATTCTATGGAGGAAGCTGATATT 2100
Query 2101 TTAAGTGATCGAATAGGGATCATGGCTAAAGGCAGGCTCCGCTGCATTGGGACCTCAATC 2160
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2101 TTAAGTGATCGAATAGGGATCATGGCTAAAGGCAGGCTCCGCTGCATTGGAACCTCAATC 2160
Query 2161 AGGTTAAAATCCCGCTTTGGTACAGGATTTGTTGCTAACGTTAGCTTCATCGAAAGCAAA 2220
||||||||||| |||||||| || ||||||||||||| ||||||||||||||||| ||||
Sbjct 2161 AGGTTAAAATCTCGCTTTGGCACGGGATTTGTTGCTACCGTTAGCTTCATCGAAAACAAA 2220
Query 2221 AATGACAATAACATCGGTGTTGGAGCTTCGCACGAGCCATTGAAGAAATTCTTTAAAGAG 2280
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2221 AATGACAATAACATCGGTGTTGGAGCTTCGCACGAGCCATTGAAGAAATTTTTTAAAGAG 2280
Query 2281 CATCTGAAAGTTGAGCCAACAGAAGAAAACAAAGCTTTCATGACTTTTGTTATCCCACAC 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2281 CATCTGAAAGTTGAGCCAACAGAAGAAAACAAAGCTTTCATGACTTTTGTTATCCCACAC 2340
Query 2341 GACAAAGAAAACCTTTTGACGGGGTTTTTTGAGGAGCTACAAAACAGAGAATCTGAATTT 2400
||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 2341 GACAAAGAAAATCTTTTGACG---------------CTACAAAACAGAGAATCTGAATTT 2385
Query 2401 GGAATCTCGGACATCCAACTCGGTCTTGCGACTCTTGAAGAAGTGTTTCTCAACATCGCA 2460
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 2386 GGAATCTCGGACATCCAACTTGGTCTAGCGACTCTTGAAGAAGTGTTTCTCAACATCGCA 2445
Query 2461 AGACAGGCTGAACTAGAAAGCGCAACAGCCGAAGGAAACATGGTCACTCTGGAGTTAAAA 2520
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |
Sbjct 2446 AGACAGGCTGAACTAGAAAGCGCAACAGCTGAAGGAAACATGGTCACTTTGGAGTTAGCA 2505
Query 2521 TCAGGCATCTCACTAGAGATACCTGTGGGAGCAAGATTTGTTGGGATCCCTGATACAGAA 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2506 TCAGGCATCTCACTAGAGATACCTGTGGGAGCAAGATTTGTTGGGATCCCTGATACAGAA 2565
Query 2581 AACGCAGAGAATCCAAGTGGGGTAATGGTGGAAGTGTACTGGCAACAAGACGGGTCGGGA 2640
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 2566 AACGCAGAGAATCCAAGTGGAGTAATGGTGGAAGTGTACTGGCAACAAGACGGCTCGGGG 2625
Query 2641 TCGATGTGCATCTCAGGACACTCATCAGAGATGCGGGTGCCACAGAATGTTCCGGTGACA 2700
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2626 TCGATGTGCATCTCTGGACACTCATCAGAGATGCGGGTACCACAGAATGTTCCGGTGACA 2685
Query 2701 CGTCCACCATCGCCAGATGCATTAGGACATAAA-GACCTACGACAAGGGGTTCGTGGTGT 2759
||||||||||| ||| ||||||||||||||||| | |||||||||||||||||||||| |
Sbjct 2686 CGTCCACCATCACCAAATGCATTAGGACATAAAAG-CCTACGACAAGGGGTTCGTGGTAT 2744
Query 2760 CGTGATTGATTTATGA 2775
|||||| |||||||||
Sbjct 2745 CGTGATCGATTTATGA 2760
> AT5G61730.1 | Symbols: ATATH11, ATH11 | ABC2 homolog 11 | chr5:24803583-24807898
REVERSE LENGTH=2823
Length=2823
Score = 1746 bits (945), Expect = 0.0
Identities = 1339/1522 (88%), Gaps = 56/1522 (4%)
Strand=Plus/Plus
Query 1237 TGGCTCCTTGGG-ACATTCCTATTCTGGTTTGT-TCTGGCTATCTACTTTGACAATATTA 1294
||||| | |||| || ||| | ||||||||||| | ||||| ||||||||||||| || |
Sbjct 1279 TGGCT-CGTGGGAACGTTCTTTTTCTGGTTTGTAT-TGGCTCTCTACTTTGACAACATCA 1336
Query 1295 TTCCCAACT-CGTCCGGTGTAAGAAAACCGATCTTCTACTTTTTAGCACCTGGTTATTGG 1353
| ||||| | | |||||||| |||||| |||||||||||||| || |||| ||||||||
Sbjct 1337 TCCCCAA-TGCATCCGGTGTGAGAAAATCGATCTTCTACTTTCTAAAACCTAGTTATTGG 1395
Query 1354 ACTGGCAAAGGGGGCAACAAAGTGGAAGTTCCACCCGTGGAGCATAATACGCCAGATGAC 1413
|||||||||| ||||||||||||||||||||||| || ||||||| ||| ||||| |||
Sbjct 1396 ACTGGCAAAGAAGGCAACAAAGTGGAAGTTCCACCAGTAGAGCATATTACACCAGAGGAC 1455
Query 1414 AAAGATGTGCTTGAAGAAGAGACAGAAGTTAAACAACAAGCAATGGATGGAATAGTTGAT 1473
|||||||||||||||| |||| |||||||||||||||||||||||||| |||||||
Sbjct 1456 GAAGATGTGCTTGAAGAGGAGATTTTAGTTAAACAACAAGCAATGGATGGAAGAGTTGAT 1515
Query 1474 CCTAACATTGCAGTTCAGATACATGGTCTTGCAAAGACATATCCTGGGACTACAAAGCTT 1533
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1516 CCTAACATTGCAGTTCAGATACATGGTCTTGCAAAGACATATCCTGGAACAACAAAGCTT 1575
Query 1534 GGATGCTGCAAATGCACCAAAACTTCGCCTTTTCATGCTGTAAAGGGTTTGTGGATGAAT 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1576 GGATGCTGCAAATGCACCAAAACTTCGCCTTTTCATGCTGTAAAGGGTTTGTGGATGAAT 1635
Query 1594 ATTGCCAAAGATCAGTTGTTTTGTCTTCTTGGACCTAATGGCGC-GGGAAAAACAACTAC 1652
||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||
Sbjct 1636 ATTGCCAAAGATCAGTTGTTTTGTCTTCTCGGACCTAATGGCGCAGGGAAAA-CAACTAC 1694
Query 1653 TATTAGTTGTTTGACTGGCATAAATCCAGTTACTGGTGGTGATGCTCTTATATATGGAGA 1712
|||||||||||||||||||||||||||||| |||||||| ||||| || |||||| |
Sbjct 1695 TATTAGTTGTTTGACTGGCATAAATCCAGTCACTGGTGGGGATGCAAAAATCTATGGAAA 1754
Query 1713 CTCCATAAGAAGTTCCGTGGGTATGTCTAACATTCGTAAAATGATAGGAGTGTGTCCTCA 1772
||||||||||| || || |||||||| ||||||||||||||||||||||| ||||||||
Sbjct 1755 TTCCATAAGAAGCTCTGTTGGTATGTCCAACATTCGTAAAATGATAGGAGTTTGTCCTCA 1814
Query 1773 GTTTGATATTCTTTGGGATGCTTTGTCTAGTGAAGAACACCTCCACCTCTTTGCTAGCAT 1832
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1815 GTTTGATATTCTTTGGGATGCTTTGTCTAGTGAAGAGCACCTCCACCTCTTTGCTAGCAT 1874
Query 1833 CAAAGGATTGCCACCAGCATCGATCAAATCGACTGCTGAGAAGTTACTGGCGGATGTAAA 1892
|||||| ||||||||| ||||||||||||||| ||| ||||||||||||| ||||| ||
Sbjct 1875 CAAAGGGTTGCCACCATCATCGATCAAATCGATTGCAGAGAAGTTACTGGTAGATGTGAA 1934
Query 1893 ACTGACAGGAGCTGCGAAAGTTAGAGCAGGAAGTTATAGTGGTGGAATGAAACGTCGACT 1952
|| |||||| | |||||| |||||||||||||||| |||||||||||||||||||| ||
Sbjct 1935 GCTAACAGGATCGGCGAAAATTAGAGCAGGAAGTTACAGTGGTGGAATGAAACGTCGGCT 1994
Query 1953 CAGTGTTGCGGTAGCACTTATCGGTGATCCCAAGCTG--------A------C--A--AC 1994
|||||||| ||||||| || ||||||||||||||| | | | ||
Sbjct 1995 GAGTGTTGCAATAGCACTCATTGGTGATCCCAAGCTGGTTTTTCTAGATGAACCGACTAC 2054
Query 1995 TGGCATGGACCCTATCACGAGGAGACATGTGTGGGACATTATACAAGAGTCAAAGAAAGG 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2055 TGGCATGGACCCTATCACGAGGAGACATGTGTGGGACATTATACAAGAGTCAAAGAAAGG 2114
Query 2055 TCGTGCCATCATACTAACGACGCATTCTATGGAAGAAGCTGATATTTTAAGTGATCGAAT 2114
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2115 TCGTGCCATCATACTAACGACGCATTCTATGGAGGAAGCTGATATTTTAAGTGATCGAAT 2174
Query 2115 AGGGATCATGGCTAAAGGCAGGCTCCGCTGCATTGGGACCTCAATCAGGTTAAAATCCCG 2174
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 2175 AGGGATCATGGCTAAAGGCAGGCTCCGCTGCATTGGAACCTCAATCAGGTTAAAATCTCG 2234
Query 2175 CTTTGGTACAGGATTTGTTGCTAACGTTAGCTTCATCGAAAGCAAAAATGACAATAACAT 2234
|||||| || ||||||||||||| ||||||||||||||||| |||||| |||
Sbjct 2235 CTTTGGCACGGGATTTGTTGCTACCGTTAGCTTCATCGAAAACAAAAAAGAC-------- 2286
Query 2235 CGGTGTTGGAGCTTCGCACGAGCCATTGAAGAA-ATTCTTTAAAGAGCATCTGAAAGTTG 2293
|||| | | | | ||||||||||| || ||||||||| |||| ||| |||||||
Sbjct 2287 -GGTGC---A-C--C-C--GAGCCATTGAA-AAGATTCTTTAAGGAGCGTCTAAAAGTTG 2335
Query 2294 AGCCAACAGAAGAAAACAAAGCTTTCATGACTTTTGTTATCCCACACGACAAAGAA-AAC 2352
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 2336 AGCCAACAGAAGAAAACAAAGCTTTCATGACTTTTGTAATCCCACACGACAAAGAGCAAC 2395
Query 2353 CTTTTGACGGGGTTTTTTGAGGAGCTACAAAACAGAGAATCTGAATTTGGAATCTCGGAC 2412
|||||| ||||||||| | |||||||||| | ||||||||||||||||| ||| | |||
Sbjct 2396 -TTTTGAAGGGGTTTTTCGCGGAGCTACAAGATAGAGAATCTGAATTTGGTATCGCAGAC 2454
Query 2413 ATCCAACTCGGTCTTGCGACTCTTGAAGAAGTGTTTCTCAACATCGCAAGACAG-GCTGA 2471
|| || ||||||||||| |||||||||||||||||| | |||||||| |||| | |||||
Sbjct 2455 ATTCAGCTCGGTCTTGCCACTCTTGAAGAAGTGTTTTTGAACATCGCTAGAC-GTGCTGA 2513
Query 2472 ACTAGAAAGCGCAACAGCCGAAGGAAAC-ATGGTCACTCTGGAGTTAAAATCAGGCATCT 2530
||||||||||||||| | ||||||| | ||||| ||||| |||||| |||||||||||
Sbjct 2514 ACTAGAAAGCGCAACTGTTGAAGGAA-CTATGGTAACTCTCGAGTTAGAATCAGGCATCG 2572
Query 2531 CACTAGAGATACCTGTGGGAGCAAGATTTGTTGGGATCCCTG-ATACAGAAAACGCAGAG 2589
|| | |||||||||||||||||||||||||| || ||||||| | |||||||||||||||
Sbjct 2573 CAGTCGAGATACCTGTGGGAGCAAGATTTGTAGGTATCCCTGGA-ACAGAAAACGCAGAG 2631
Query 2590 AATCCAAGTGGGGTAATGGTGGAAGTGTACTGGCAACAAGACGGGTCGGGATCGATGTGC 2649
|||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2632 AATCCAAGAGGACTAATGGTGGAAGTGTACTGGCAACAAGACGGGTCAGGATCGATGTGC 2691
Query 2650 ATCTCAGGACACTCATCAGAGATGCGGGTGCCACAGAATGT-TCCGGTGACACGTCCACC 2708
|| || |||||||| | ||||||||| | ||| ||||||| || ||||| | | |||
Sbjct 2692 ATTTCTGGACACTCGGCGGAGATGCGGATCCCAGAGAATGTATC-GGTGATATATGAACC 2750
Query 2709 ATCGCCAGATGCATTAGGACAT 2730
||| || | | ||||||||||
Sbjct 2751 ATCATCACAAGTATTAGGACAT 2772
Score = 1286 bits (696), Expect = 0.0
Identities = 1065/1240 (86%), Gaps = 37/1240 (3%)
Strand=Plus/Plus
Query 1 ATGATTTTGCAAGAAGGCTTGCCGC-TTCTCTACCAGCAGTTCACGGCGTTGTTCGGGAA 59
|||| | ||| |||||||||||||| || || | ||||| ||||| || |||||| |||
Sbjct 1 ATGACTCTGCGAGAAGGCTTGCCGCTTTTTC-ATCAGCAATTCACAGCTTTGTTCAAGAA 59
Query 60 GAATCTATTGCTTTCATGGCGGAACAAGAGAGCCACGTGTCTTCAACTCTTCTCTTCATT 119
||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||
Sbjct 60 GAATCTACTGCTTTCATGGAGGAACAAGAGAGCCACGTGTCTTCATCTCTTCTCTTCGTT 119
Query 120 CTTCTTCATCCTTGTCATCTTTTGTATAGAGGAAGCCAT-GAAGGCAAGCGACGCATCCT 178
||||||||||||| ||||||| | |||||||||| | | || || |||||| | |||
Sbjct 120 CTTCTTCATCCTTCTCATCTTCTCTATAGAGGAA-TCTTCCAAAGCGAGCGACTTAACCT 178
Query 179 CAAC-AGCGTACAAGAATATCACTGATCCTACA-CTATTGGTTTCCCCACCGATTCTTCC 236
| || || | |||||||| |||| ||||||| | | ||| || || | |||||||||||
Sbjct 179 CGACTAG-GCACAAGAATGTCACAGATCCTAAAGC-ATTAGTCTCTCTTCCGATTCTTCC 236
Query 237 TTGTGAGGACAAGTTCTTT-GTGAAG-CTTCCTTGCTATGACTTCGTGTGGAGTGGGAAC 294
|||||||| ||||| ||| ||| || ||||| || | |||||||||||||||||| |||
Sbjct 237 ATGTGAGGATAAGTT-TTTCGTG-AGACTTCCATGTTTTGACTTCGTGTGGAGTGGCAAC 294
Query 295 CATAGTCGCCGCGTTACTGATATCGTCTCTGCAATTATGGCTAACAATCCAGGGA-GACC 353
|| || || || || ||||| || |||||||||||||||||||||||||| ||| ||||
Sbjct 295 CAGAGCCGTCGTGTCACTGACATTGTCTCTGCAATTATGGCTAACAATCC-TGGACGACC 353
Query 354 AATTCCAACCAACAAGGTTCAATC-GTT-CAAGGAGCCTGATGAGGTAGATGCATGGCTT 411
|||||||||||| ||||||||||| || ||| ||||||| || |||||||||||| ||
Sbjct 354 AATTCCAACCAATAAGGTTCAATCATTTACAA--AGCCTGAGGAAGTAGATGCATGGTTT 411
Query 412 CTGTCACATCCCTTGCAAGTTCCAGGAGCTTTGCATTTTGTGGAAAGGAATGCTTCAGTA 471
|||||||||| | |||||| |||| ||||||||||||||||||| ||||||| ||||
Sbjct 412 ATGTCACATCCATCGCAAGTAACAGGGGCTTTGCATTTTGTGGAAAAGAATGCTACAGTG 471
Query 472 ATCAGCTATGGTATTCAAACAAATTCTTCCTCGGAGAGAAAACGTGGTCAGAC-TGAAGA 530
||||||||||| ||||||||||| ||||| ||||||| ||||||||||| | | ||||||
Sbjct 472 ATCAGCTATGGAATTCAAACAAACTCTTCATCGGAGAAAAAACGTGGTC-GGCGTGAAGA 530
Query 531 TCCTACGTTTAAGTTTCTTGTTCCTCTTCAAGTCGCTGCAGAGCGTGAAATCGCAAGGTC 590
||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 531 TCCTACGTTTAAGTTCCTTGTTCCTCTTCAAATTGCTGCAGAGCGTGAAATCGCAAGGTC 590
Query 591 CTTAATTGGAGATCCAGATTTTGGTTGGGGTTTGGGATTTAAGGAATTTGCACGACCAGC 650
||||||||||||||| | ||| |||||| ||| ||||||||||||||||| || |||||
Sbjct 591 TTTAATTGGAGATCCAAAGTTTAGTTGGGATTTTGGATTTAAGGAATTTGCGCGTCCAGC 650
Query 651 TA-T--T-AT-AACTGAAACTACCTCTGCACTCTCAGTC--ATGGGACCAGTGTTCTTCC 703
| | | | || || | | | |||||| | | | || ||||||||||||||||| |
Sbjct 651 GATTGGTGGTGAAGTG-ATC-ATTTCTGCA-TTTTA-TCTTATGGGACCAGTGTTCTTTC 706
Query 704 TTGCTTTCTCCATGTTTGGTTTTGTTCTCCAACTCGGTTCCCTGGTTACCGAGAAAGAGC 763
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 707 TTGCTTTCTCCATGTTTGGTTTTGTTCTCCAACTCGGGTCTGTGGTTACCGAGAAAGAGC 766
Query 764 TCAAACTTCGGC-AGGCAATGACAATGATGGGTGTTTATGATTCTGCATATTGGTTGTCA 822
| ||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 767 TAAAACTTC-GCGAGGCAATGACAACGATGGGTGTTTATGAATCTGCATATTGGTTGTCA 825
Query 823 TGGCTCTTATGGGAAGGAATCCTTACTTTTGTCTCCTCACTTTTATTGGTCCTCTTTGGA 882
|||||| ||||||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct 826 TGGCTCATATGGGAAGGAATCCTTACCTTTGTCTCCTCACTCTTCTTGGTCCTCTTTGGA 885
Query 883 ATGATATTCCGGTTTGATTTTTTCTTGAAGAACAGTTTTGTTCTTGTCTTCCTACTTTTC 942
||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 ATGATGTTCCAGTTTGAGTTTTTCTTGAAGAACAGTTTTGTTCTTGTCTTCCTACTTTTC 945
Query 943 TTGCTCTTTCAGTTTAATATGATTGGCCTAGCATTTGCGCTATCATCTATTATTAGCAAA 1002
|| || ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 946 TTTCTTTTTCAGTTTAATATGATTGGCCTAGCATTCGCGCTATCATCTATCATTAGCAAA 1005
Query 1003 TCATCTTCGGCAACAACCGTCGGTTTCCTTGTGTTTTTGATTGGTTTTATAACACAGATT 1062
||||||||||||||||| || ||||||||||||||| || ||||||||||||||||||||
Sbjct 1006 TCATCTTCGGCAACAACTGTTGGTTTCCTTGTGTTTCTGGTTGGTTTTATAACACAGATT 1065
Query 1063 GTATCAGCTACTGGATTCCCTTATTCCAGCGCTTATGCGGTTTCTCGTCGGGTGATGTGG 1122
||| || || |||||||||||||||| ||||| ||| || || | | || || || |||
Sbjct 1066 GTAACAACTGCTGGATTCCCTTATTCAAGCGCATATTCGATTGGTAGCCGTGTCATTTGG 1125
Query 1123 TCTCTTTTTCCACCAAACACTTTTTCTGCGGGACTTAAGCTTCTTCTTGATGCAACCTCA 1182
|| || |||||||| || || ||||||||||| || |||| |||||||| || || |||
Sbjct 1126 TCACTCTTTCCACCGAATACCTTTTCTGCGGGTCTGCAGCTGCTTCTTGAAGCGACATCA 1185
Query 1183 ACTCCCAAA-AGCTCTGGAATCAGTTGGAGT-AATAGAGC 1220
||||| | | ||||||||||||||||||| || |||||
Sbjct 1186 TCTCCCGGAGA-CTCTGGAATCAGTTGGAGTGAA-AGAGC 1223
> AT3G47730.1 | Symbols: ATATH1, ATH1, ABCA2 | ATP-binding cassette
A2 | chr3:17594060-17598896 REVERSE LENGTH=3302
Length=3302
Score = 1184 bits (641), Expect = 0.0
Identities = 1105/1326 (83%), Gaps = 44/1326 (3%)
Strand=Plus/Plus
Query 1380 AGTTCCACCCGTGGAGCATAATACGCCAGATGACAAAGATGTGCTTGAAGAAGAGACAGA 1439
||||||||| ||||| || | ||| ||||||||| ||||||| |||||||| || ||
Sbjct 1514 AGTTCCACCTGTGGATCACATTACCCCAGATGACGAAGATGTCCTTGAAGAGGAAACTTT 1573
Query 1440 AGTTAAACAACAAGCAATGGATGGAATAGTTGATCCTAACATTGCAGTTCAGATACATGG 1499
|||||||||||| ||||||| || |||||||||| ||| |||||||||| |||| |||
Sbjct 1574 AGTTAAACAACATTCAATGGAGGGTTTAGTTGATCCCAACGTTGCAGTTCAAATACGTGG 1633
Query 1500 TCTTGCAAAGACATATCCTGGGACTACAAAGCTTGGATGCTGCAAATGCACCAAAACTTC 1559
|||||||||||| ||||||||||| || ||| |||||||||||||||||| ||||||||
Sbjct 1634 TCTTGCAAAGACTTATCCTGGGACGACGAAGTTTGGATGCTGCAAATGCAAGAAAACTTC 1693
Query 1560 GCCTTTTCATGCTGTAAAGGGTTTGTGGATGAATATTGCCAAAGATCAGTTGTTTTGTCT 1619
|||||||||||| | |||||||||||||||||||||||||||||||| || || |||||
Sbjct 1694 CCCTTTTCATGCTCTGAAGGGTTTGTGGATGAATATTGCCAAAGATCAATTATTCTGTCT 1753
Query 1620 TCTTGGACCTAATGGCGC-GGGAAAAACAACTACTATTAGTTGTTTGACTGGCATAAATC 1678
||||||||| ||||| || ||| |||||||||||||| | ||||||||| ||| || ||
Sbjct 1754 TCTTGGACCCAATGGTGCAGGG-AAAACAACTACTATCAATTGTTTGACAGGCTTATTTC 1812
Query 1679 CAGTTACTGGTGGTGATGCTCTTATATATGGAGACTCCATAAGAAGTTCCGTGGGTATGT 1738
||||||||||||||||||| || || |||||| | || |||||||| || || |||||||
Sbjct 1813 CAGTTACTGGTGGTGATGCACTAATTTATGGAAATTCTATAAGAAGCTCTGTTGGTATGT 1872
Query 1739 CTAACATTCGTAAAATGATAGGAGTGTGTCCTCAGTTTGATATTCTTTGGGATGCTTTGT 1798
| ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1873 CCAACATCCGTAAAATGATTGGAGTTTGTCCTCAGTTTGATATTCTTTGGGATGCTTTGT 1932
Query 1799 CTAGTGAAGAACACCTCCACCTCTTTGCTAGCATCAAAGGATTGCCACCAGCATCGATCA 1858
|| |||||||||||||| | |||||||||||||||||||| |||||||| |||| ||||
Sbjct 1933 CTGGTGAAGAACACCTCAAACTCTTTGCTAGCATCAAAGGGTTGCCACCTTCATCAATCA 1992
Query 1859 AATCGACTGCT-GAGAAGTTACTGGCGGATGTAAAACTGACAGGAGCTGCGAAAGTTAGA 1917
| |||| || | ||||||| ||||||||| |||||||| |||| ||| | |||| | ||
Sbjct 1993 ACTCGA-TGGTTGAGAAGTCACTGGCGGAGGTAAAACTAACAGAAGCAGGGAAAATCAGG 2051
Query 1918 GCAGGAAGTTATAGTGGTGGAATGAAACGTCGACTCAGTGTTGCGGTAGCACTTATCGGT 1977
||||||||||| ||||| ||||||||||| |||||||||||||| || | || || |||
Sbjct 2052 GCAGGAAGTTACAGTGGAGGAATGAAACGGCGACTCAGTGTTGCAGTTTCTCTCATTGGT 2111
Query 1978 GATCCCAAGCTG----------AC-AAC-T------GGCATGGACCCTATCACGAGGAGA 2019
||||| |||||| || ||| | ||||||||||| ||||||||||||
Sbjct 2112 GATCCAAAGCTGGTCTTCCTGGACGAACCTACTACAGGCATGGACCCGATCACGAGGAGA 2171
Query 2020 CATGTGTGGGACATTATACAAGAGTCAAAGAAAGGTCGTGCCATCATACTAACGACGCAT 2079
||||||||||| || ||||| || | ||||||||||||||||| |||||||| || |||
Sbjct 2172 CATGTGTGGGATATCATACAGGAAACCAAGAAAGGTCGTGCCATTATACTAACAACACAT 2231
Query 2080 TCTATGGAAGAAGCTGATATTTTAAGTGATCGAATAGGGATCATGGCTAAAGGCAGGCTC 2139
|| ||||||||||||||||| ||||||||||| |||||||| |||||||| || ||||||
Sbjct 2232 TCGATGGAAGAAGCTGATATCTTAAGTGATCGGATAGGGATAATGGCTAAGGGTAGGCTC 2291
Query 2140 CGCTGCATTGGGACCTCAATCAGGTTAAAATCCCGCTTTGGTACAGGATTTG-TTGCTAA 2198
||||||||||| ||||| |||||||| |||||||||||||| ||||| ||| |||||||
Sbjct 2292 CGCTGCATTGGAACCTCGATCAGGTTGAAATCCCGCTTTGGCACAGG-TTTCATTGCTAA 2350
Query 2199 CGTTAGCTTCATCGAAAGCAAAAATGACAATAAC-ATCGGTG-TT-GGAGCTTCGCACGA 2255
| ||||||| | |||||||| || ||||| | | | || || ||| ||| | |||
Sbjct 2351 CATTAGCTTTGTTGAAAGCAACAACCACAATGGCGAA-GCTGGTTCGGA--TTCACGCGA 2407
Query 2256 GCCATTGAAGAAATTCTTTAAAGAGCATCTGAAAGTTGAGCCAACAGAAGAAAACAAAGC 2315
|||| ||||||||||||||||||| ||||| ||||| | |||| |||||||||||| ||
Sbjct 2408 GCCAGTGAAGAAATTCTTTAAAGATCATCTCAAAGTCAAACCAATAGAAGAAAACAAGGC 2467
Query 2316 TTTCATGACTTTTGTTATCCCACACGACAAAGAAAACCTTTTGACGGGGTTTTTTGAGGA 2375
||||||||||||||||| || ||||||||||| || |||||||| | ||||| | ||
Sbjct 2468 CTTCATGACTTTTGTTATACCTCACGACAAAGAGAATCTTTTGACAAGCTTTTTCGCTGA 2527
Query 2376 GCTACAAAACAGAGAATCTGAATTTGGAATCTCGGACATCCAACTCGGTCTTGCGACTCT 2435
||| ||| |||||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct 2528 GCTTCAAGACAGAGAAGAAGAATTTGGAATCTCAGATATCCAACTTGGTCTTGCTACTCT 2587
Query 2436 TGAAGAAGTGTTTCTCAACATCGCAAGACAGGCTGAACTAGAAAGCGCAACAGCCGAAGG 2495
||||||||| ||| | ||||| |||||| | |||||||| |||||||| | | || ||
Sbjct 2588 TGAAGAAGTCTTTTTGAACATAGCAAGAAAAGCTGAACTCGAAAGCGCTGCGGTTGATGG 2647
Query 2496 AAACA-TGGTCACTCTGGAGTTAAAATCAGGCATCT-CACTAGAGATACCTGT-GGGAGC 2552
|| || |||||||||| || |||| ||| || ||| || | |||||||| || ||| ||
Sbjct 2648 AA-CAATGGTCACTCTCGACTTAACATCTGGT-TCTTCAGTCGAGATACCGGTAGGG-GC 2704
Query 2553 AAGATTTGTTGGGATCCCTG-ATACAGAAAAC-GCAGAGAATCCAAGTGGGGTAATGGTG 2610
||||||| | ||||| || | | ||||||| | |||||||||||| | || || ||||||
Sbjct 2705 AAGATTTATCGGGATACCGGGA-ACAGAAA-CTGCAGAGAATCCACGAGGAGTCATGGTG 2762
Query 2611 GAAGTGTACTGGCAACAAGACGGGTCGGGATCGAT-GTGCATCTCAGGACACTC-ATCAG 2668
|| ||||| ||||||||||||| ||| ||||| || |||||||||||||||||| | |||
Sbjct 2763 GAGGTGTATTGGCAACAAGACGAGTCAGGATC-ATTGTGCATCTCAGGACACTCCA-CAG 2820
Query 2669 AGATGC 2674
||||||
Sbjct 2821 AGATGC 2826
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137858759364
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5