BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496399
Length=3268
Score E
Sequences producing significant alignments: (Bits) Value
AT5G62230.1 | Symbols: ERL1 | ERECTA-like 1 | chr5:24996234-250... 4966 0.0
AT5G07180.1 | Symbols: ERL2 | ERECTA-like 2 | chr5:2227571-2233... 2525 0.0
> AT5G62230.1 | Symbols: ERL1 | ERECTA-like 1 | chr5:24996234-25002340
FORWARD LENGTH=3310
Length=3310
Score = 4966 bits (2689), Expect = 0.0
Identities = 3067/3249 (94%), Gaps = 27/3249 (1%)
Strand=Plus/Plus
Query 45 TGCTACAATGGCAGAACAAGCCTGAACTTTCGTTCTTTTGTGTTTTGGTTTCCTCTGCTT 104
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 64 TGCAACAATGGCAGAACAAGCCTGAAGTTTCGTTCTTTTGTGTTTTGGTTTCCTCTGCTT 123
Query 105 TGTTGTTTTTGAATC-AAACTTCAACGAGCTTATTGGCTTATTACCTCAAAAGG--A-AA 160
||||||| ||||||| |||||||||||||||| ||||||||||||| ||||||| | ||
Sbjct 124 TGTTGTTATTGAATCAAAACTTCAACGAGCTTCTTGGCTTATTACCCCAAAAGGAAAGAA 183
Query 161 G--T-AGAAGaaaaaaaTGAAGGAGAAGATGCAGCGAATGGTTTTATGTTTAGCAATGGT 217
| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 184 GAATAAGAAGAAAAAAATGAAGGAGAAGATGCAGCGAATGGTTTTATCTTTAGCAATGGT 243
Query 218 GGTTTTTCTGCTTCTTGGTGTTGCTTCTTCTATGAACAACGAAGGGAAAGCTTTGATGGC 277
|| |||| || || ||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 244 GGGTTTTATGGTTTTTGGTGTTGCTTCGGCTATGAACAACGAAGGGAAAGCTCTGATGGC 303
Query 278 GATAAAAGGCTCTTTCAGCAACTTAGTGAATATGCTTTTGGATTGGGACGATGTTCACAA 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 304 GATAAAAGGCTCTTTCAGCAACTTAGTGAATATGCTTTTGGATTGGGACGATGTTCACAA 363
Query 338 CAGTGACTTCTGTTCTTGGAGAGGTGTCTACTGCGACAACGTTACCTTCTCCGTTGTCTC 397
||||||||| ||||||||| ||||||| | |||||||||||||| || ||||||||||||
Sbjct 364 CAGTGACTTGTGTTCTTGGCGAGGTGTTTTCTGCGACAACGTTAGCTACTCCGTTGTCTC 423
Query 398 GCTGAATCTGTCAAGTCTGAATCTTGGAGGGGAGATATCTCCAGCTATTGGAGATCTATG 457
|||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 424 TCTGAATTTGTCCAGTCTGAATCTTGGAGGGGAGATATCTCCAGCTATTGGAGACCTACG 483
Query 458 GAATTTGGAATCAATAGACTTGCAAGGAAATAAATTGGCTGGTCAAATCCCTGATGAGAT 517
||||||| ||||||||||||||||||| |||||| | || |||||||| || ||||||||
Sbjct 484 GAATTTGCAATCAATAGACTTGCAAGGTAATAAACTAGCAGGTCAAATTCCAGATGAGAT 543
Query 518 TGGAAACTGTGCTTCTCTTGTTTATCTGGATTTGTCTGATAATCTGTTATATGGTGACAT 577
|||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct 544 TGGAAACTGTGCTTCTCTTGTTTATCTGGATTTGTCCGAGAATCTGTTATATGGAGACAT 603
Query 578 ACCTTTCTCAATCTCTAAACTCAAGCAGCTTGAAACTCTGAATCTGAAGAACAATCAGCT 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 ACCTTTCTCAATCTCTAAACTCAAGCAGCTTGAAACTCTGAATCTGAAGAACAATCAGCT 663
Query 638 CACAGGCCCAGTACCAGCGACCTTAACCCAGATTCCAAACCTTAAGAGACTTGATCTTGC 697
|||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 664 CACAGGTCCTGTACCAGCAACCTTAACCCAGATTCCAAACCTTAAGAGACTTGATCTTGC 723
Query 698 TGGCAATCATCTAACGGGTGAGATATCGAGATTGCTTTACTGGAATGAAGTTTTGCAGTA 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 724 TGGCAATCATCTAACGGGTGAGATATCGAGATTGCTTTACTGGAATGAAGTTTTGCAGTA 783
Query 758 TCTCGGTTTACGTGGGAATATGTTGACTGGAACGTTATCTTCTGATATGTGTCAGCTAAC 817
||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 784 TCTTGGATTACGAGGGAATATGTTGACTGGAACGTTATCTTCTGATATGTGTCAGCTAAC 843
Query 818 CGGTTTATGGTACTTTGATGTGAGAGGAAATAATCTAACTGGAACAATCCCTGAGAGCAT 877
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 844 CGGTTTGTGGTACTTTGATGTGAGAGGAAATAATCTAACTGGAACCATCCCGGAGAGCAT 903
Query 878 TGGAAATTGCACAAGCTTTCAAATCCTGGACATATCTTATAATCAGATAACTGGAGAGAT 937
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 904 CGGAAATTGCACAAGCTTTCAAATCCTGGACATATCTTATAATCAGATAACAGGAGAGAT 963
Query 938 TCCTTACAACATCGGCTTTCTCCAAGTTGCTACTCTGTCACTTCAAGGAAACAGATTGAC 997
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 964 TCCTTACAATATCGGCTTCCTCCAAGTTGCTACTCTGTCACTTCAAGGAAACAGATTGAC 1023
Query 998 TGGTAGAATTCCAGAAGTTATAGGTCTAATGCAGGCTCTTGCTGTTTTGGATTTGAGTGA 1057
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1024 GGGTAGAATTCCAGAAGTTATTGGTCTAATGCAGGCTCTTGCTGTTTTGGATTTGAGTGA 1083
Query 1058 TAATGAGCTTGTTGGTCCTATACCACCGATACTTGGCAATCTCTCGTTTACCGGAAAGTT 1117
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1084 CAATGAGCTTGTTGGTCCTATCCCACCGATACTTGGCAATCTCTCATTTACCGGAAAGTT 1143
Query 1118 GTATCTCCATGGCAATAAGCTCACTGGTCCAATCCCATCTGAGCTTGGGAATATGTCACG 1177
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 1144 GTATCTCCATGGCAATATGCTCACTGGTCCAATCCCCTCTGAGCTTGGGAATATGTCACG 1203
Query 1178 TCTCAGCTATTTGCAGCTAAATGACAATAAACTAGTCGGAACTATTCCACCTGAGCTTGG 1237
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1204 TCTCAGCTATTTGCAGCTAAACGACAATAAACTAGTGGGAACTATTCCACCTGAGCTTGG 1263
Query 1238 TAAGCTGGAGCAATTGTTTGAATTGAATCTTGCCAACAACCGTTTGGTAGGGCCCATACC 1297
||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct 1264 AAAGCTGGAGCAATTGTTTGAACTGAATCTTGCCAACAACCGTTTAGTAGGGCCCATACC 1323
Query 1298 ATCCAACATTAGTTCATGTGCAGCCTTGAATCAATTCAATGTTCATGGGAACCTCTTAAG 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1324 ATCCAACATTAGTTCATGTGCAGCCTTGAATCAATTCAATGTTCATGGGAACCTCTTGAG 1383
Query 1358 TGGATCTATACCACTGGCGTTTCGCAATCTCGGGAGTTTGACTTATCTAAATCTTTCGTC 1417
||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1384 TGGATCTATTCCACTGGCGTTTCGCAATCTCGGGAGCTTGACTTATCTGAATCTTTCGTC 1443
Query 1418 GAACAATTTCAAGGGGAAAATACCAGTTGAGCTTGGACATATAATCAATCTTGACAAACT 1477
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1444 GAACAATTTCAAGGGAAAAATACCAGTTGAGCTTGGACATATAATCAATCTTGACAAACT 1503
Query 1478 AGATCTGTCTGGCAATAACTTCTCAGGGTCTATACCATTAACGCTTGGTGATCTTGAACA 1537
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1504 AGATCTGTCTGGCAATAACTTCTCAGGGTCTATACCATTAACGCTTGGCGATCTTGAACA 1563
Query 1538 CCTTCTCATATTAAATCTAAGCAGAAACTATCTTAGTGGACAATTGCCTGCAGAGTTTGG 1597
|||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||
Sbjct 1564 CCTTCTCATATTAAATCTTAGCAGAAACCATCTTAGTGGACAATTACCTGCAGAGTTTGG 1623
Query 1598 AAACCTTCGAAGCATTCAGATGATTGATGTATCATTCAATCTTATCTCCGGAGTTATTCC 1657
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1624 GAACCTTCGAAGCATTCAGATGATTGATGTATCATTCAATCTGCTCTCCGGAGTTATTCC 1683
Query 1658 AACTGAACTTGGCCAATTGCAGAATTTAAACTCTTTAATATTGAACTACAACAAGCTTCA 1717
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1684 AACTGAACTTGGCCAATTGCAGAATTTAAACTCTTTAATATTGAACAACAACAAGCTTCA 1743
Query 1718 TGGGAAAATTCCAGATCAGCTTACGAATTGTTTCGCTCTTGTCAATCTGAATGTCTCCTT 1777
||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||
Sbjct 1744 TGGGAAAATTCCAGATCAGCTTACGAACTGCTTCACTCTTGTCAATCTGAATGTCTCCTT 1803
Query 1778 CAACAATCTCTCAGGGATAATCCCACCAATGAAAAACTTCTCACGTTTTGCTCCAGCCAG 1837
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1804 CAACAATCTCTCCGGGATAGTCCCACCAATGAAAAACTTCTCACGTTTTGCTCCAGCCAG 1863
Query 1838 CTTTGTTGGAAATCCATACCTTTGTGGAAACTGGGTTGGATCTATATGCGGTCCTTTGCC 1897
|||||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||
Sbjct 1864 CTTTGTTGGAAATCCATATCTTTGTGGAAACTGGGTTGGATCTATTTGTGGTCCTTTACC 1923
Query 1898 GAAATCCCGAGTATTCTCCAGAGGTGCTGTGATCTGCATTGTTCTTGGTGTCATCACTCT 1957
|||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct 1924 GAAATCTCGAGTATTCTCCAGAGGTGCTTTGATCTGCATTGTTCTTGGCGTCATCACTCT 1983
Query 1958 CCTATGTATGATTTTCCTCGCAGTTTACAAATCGAA-GCAGCAGAAGAAGATTCTAGAAG 2016
|||||||||||||||||| |||||||||||||| || ||||||||||||||||||| |||
Sbjct 1984 CCTATGTATGATTTTCCTTGCAGTTTACAAATC-AATGCAGCAGAAGAAGATTCTACAAG 2042
Query 2017 GCCCCTCAAAACAAGCCGAAGGCTCAACCAAGCTAGTGATTCTCCACATGGACATGGCAA 2076
|| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||
Sbjct 2043 GCTCCTCAAAACAAGCTGAAGGGTTAACCAAGCTAGTGATTCTCCACATGGACATGGCAA 2102
Query 2077 TTCATACATTTGATGATATAATGAGAGTAACCGAGAATCTTAGTGAAAAGTTTATAATTG 2136
||||||||||||||||||| |||||||| || |||||||||| ||||||||||||||||
Sbjct 2103 TTCATACATTTGATGATATCATGAGAGTGACTGAGAATCTTAACGAAAAGTTTATAATTG 2162
Query 2137 GATACGGTGCTTCTAGTACGGTATACAAATGTGCATTGAAAAGTTCCCGACCTATTGCCA 2196
|||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2163 GATATGGTGCTTCTAGCACGGTATACAAATGTGCATTAAAAAGTTCCCGACCTATTGCCA 2222
Query 2197 TTAAGCGACTCTACAATCAGTATCCGCATAACTTGCGGGAATTTGAGACAGAACTCGAGA 2256
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2223 TTAAGCGACTCTACAATCAGTATCCGCATAACTTGCGGGAATTTGAGACAGAACTTGAGA 2282
Query 2257 CCATAGGGAGCATCAGGCACAGGAACATAGTCAGCTTGCATGGATATGCCTTGTCTCCTA 2316
|||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2283 CCATTGGGAGCATTAGGCACAGAAACATAGTCAGCTTGCATGGATATGCCTTGTCTCCTA 2342
Query 2317 TTGGCAACCTTCTTTTCTATGACTACATGGAAAATGGATCACTTTGGGACCTTCTTCATG 2376
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2343 CTGGCAACCTTCTTTTCTATGACTACATGGAAAATGGATCACTTTGGGACCTTCTTCATG 2402
Query 2377 GTTCACTGAAGAAAGTGAAGCTTGATTGGGAGACGAGGTTGAAGATAGCGGTTGGAGCTG 2436
| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2403 GGTCATTGAAGAAAGTGAAGCTTGATTGGGAGACAAGGTTGAAGATAGCGGTTGGAGCTG 2462
Query 2437 CGCAAGGACTCGCCTATCTTCACCATGATTGTACTCCTCGGATTATTCACCGAGACATCA 2496
| |||||||| |||||||||||||| |||||||||||||| || |||||||| |||||||
Sbjct 2463 CACAAGGACTAGCCTATCTTCACCACGATTGTACTCCTCGAATCATTCACCGTGACATCA 2522
Query 2497 AGTCATCGAACATACTTCTTGATGAGAATTTCGAAGCACATTTATCGGATTTTGGGATTG 2556
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 2523 AGTCATCGAACATACTTCTTGATGAGAATTTCGAAGCACATTTATCTGATTTCGGGATTG 2582
Query 2557 CTAAGAGCATACCAGCGAGCAAAACTCATGCTTCGACTTATGTTTTGGGAACAATTGGTT 2616
|||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 2583 CTAAGAGCATACCAGCTAGCAAAACCCATGCCTCGACTTATGTTTTGGGAACAATTGGTT 2642
Query 2617 ATATAGACCCAGAGTATGCTCGTACTTCGCGTCTCAATGAGAAATCTGATATCTACAGCT 2676
|||||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||
Sbjct 2643 ATATAGACCCAGAGTATGCTCGTACTTCACGAATCAATGAGAAATCCGATATATACAGCT 2702
Query 2677 TCGGGATTGTTCTTCTTGAGCTTCTTACTGGAAAGAAAGCAGTAGATAACGAAGCTAACT 2736
|||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct 2703 TCGGTATTGTTCTTCTTGAGCTTCTCACTGGGAAGAAAGCAGTGGATAACGAAGCTAACT 2762
Query 2737 TGCATCAACTGATATTGTCAAAGGCTGATGATAATACTGTGATGGAAGCAGTTGATCCAG 2796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2763 TGCATCAACTGATATTGTCAAAGGCTGATGATAATACTGTGATGGAAGCAGTTGATCCAG 2822
Query 2797 AGGTTACGGTGACATGTATGGATTTGGGACATATCAGAAAGACATTTCAGCTGGCTCTCT 2856
||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 2823 AGGTTACTGTGACTTGTATGGACTTGGGACATATCAGGAAGACATTTCAGCTGGCTCTCT 2882
Query 2857 TATGCACAAAGCGAAACCCTTTAGAGAGACCCACAATGCTTGAAGTCTCTAGGGTTCTGC 2916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2883 TATGCACAAAGCGAAACCCTTTAGAGAGACCCACAATGCTTGAAGTCTCTAGGGTTCTGC 2942
Query 2917 TCTCCCTTCTTCCATCTCTGCAAGTAGCAAAGAAGCTGCCTTCTCATGATCAATCGACCA 2976
|||| ||| | |||||||||||||||||||||||||| ||||||| |||||| || ||||
Sbjct 2943 TCTCTCTTGTCCCATCTCTGCAAGTAGCAAAGAAGCTACCTTCTCTTGATCACTCAACCA 3002
Query 2977 AAAAGCCGCAGCAAGAGAATGTAGTAAGGAGTCCTGAGGCAGAAGCATCGCAATGGTTTG 3036
|||||| |||||||||||||| ||| |||| |||||| ||||||||||| ||||||||||
Sbjct 3003 AAAAGCTGCAGCAAGAGAATGAAGTTAGGAATCCTGATGCAGAAGCATCTCAATGGTTTG 3062
Query 3037 TTCAGTTCCGTGAAGTCATCTCCAAAAGTAGCATATAAGAGAA-GATTCCCGGGCTTTTT 3095
||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 3063 TTCAGTTCCGTGAAGTCATCTCCAAAAGTAGCATATAAGAGAAAGATTCCAGGGCTTTT- 3121
Query 3096 GTTTAGTTTCTTGTTTCCCAAGGAAAATAGTGTTGCTGATTGGAAGGGAAGGATG-tttt 3154
|||||||||||||| ||| |||||| ||||| |||||||||||||| ||||||| ||||
Sbjct 3122 GTTTAGTTTCTTGTGTCCTAAGGAAGATAGTAATGCTGATTGGAAGGAAAGGATGGTTTT 3181
Query 3155 t-t-tAGT-A-----G--A--A---GGGGTATTTTGGGTAAGGAAAAAGAAGGTATGGGA 3199
| | |||| | | | | ||||||||||||||||||||||| || ||||| |
Sbjct 3182 TCTATAGTGAATTTAGGTAGTACAAGGGGTATTTTGGGTAAGGAAAAATAATTTATGGTA 3241
Query 3200 AGCATTTAAGACAAGAACAAAGGTTATATGAAAGAAAAGGATATGTGAAGTTAATGTTTG 3259
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3242 AGCATTTAAGACAAGAACAAAGGTTATATGAAAGAAACGGATATGTGAAGTTAATGTTTG 3301
Query 3260 TTTTCTCCC 3268
|||||||||
Sbjct 3302 TTTTCTCCC 3310
Score = 84.2 bits (45), Expect = 7e-15
Identities = 45/45 (100%), Gaps = 0/45 (0%)
Strand=Plus/Plus
Query 1 CATCTCTGGCTCTGCATTTCTTGCAGTTCACGCTAATCACCTGTT 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CATCTCTGGCTCTGCATTTCTTGCAGTTCACGCTAATCACCTGTT 45
> AT5G07180.1 | Symbols: ERL2 | ERECTA-like 2 | chr5:2227571-2233417
REVERSE LENGTH=3305
Length=3305
Score = 2525 bits (1367), Expect = 0.0
Identities = 2309/2761 (84%), Gaps = 75/2761 (3%)
Strand=Plus/Plus
Query 213 ATGGTGGTTTTTC-TGCTTCTTGGTGT-TGCTTCTTCTATGAACAACGAAGGGAAAGCTT 270
||||||| ||||| |||| |||||| | || |||| | |||||||||||||| ||||| |
Sbjct 231 ATGGTGG-TTTTCATGCTACTTGGT-TCTGTTTCTCCAATGAACAACGAAGGAAAAGCGT 288
Query 271 TGATGGCGATAAAAGGC-TCTTTCAGCAACTTAGTGAATATGCTT-TTGGATTGGGACGA 328
|||||||||| |||||| || ||||||||| | | |||||||||| || |||||||||||
Sbjct 289 TGATGGCGAT-AAAGGCTTCATTCAGCAACGTGGCGAATATGCTTCTT-GATTGGGACGA 346
Query 329 TGTTCACAA-CAGTGACTTCTGTTCTTGGAGAGGTGTCTACTGCGACAACGTTA-CCTTC 386
|||||| || || ||||| ||||||||||||||||||| ||| || ||||||| || ||
Sbjct 347 TGTTCATAACCA-CGACTTTTGTTCTTGGAGAGGTGTCTTCTGTGATAACGTTAGCC-TC 404
Query 387 TCCGTTGTCTCGCTGAATCTGTCAAGTCTGAATCTTGGAGGGGAGATATC-TCCAGCTAT 445
|||||||| || |||||||||| ||||||||||| || |||||||| | | || |
Sbjct 405 AATGTTGTCTCTCTTAATCTGTCAAACCTGAATCTTGGTGGAGAGATATCAT-CTGCCCT 463
Query 446 TGGAGATCT-ATGGAATTTGGAATCAATAGACTTGCAAGGAAATAAATTGGCTGGTCAAA 504
||||||| | || |||| || |||||||||||||||||||||||||||||| ||||||||
Sbjct 464 TGGAGATTTGAT-GAATCTGCAATCAATAGACTTGCAAGGAAATAAATTGGGTGGTCAAA 522
Query 505 TCCCTGATGAGATTGGAAACTGTGCTTCTCTTGTTTATCTGGATTTGTCTGAT-AATCTG 563
| || ||||||||||||||||||| |||||||| |||| ||||||| || | ||| ||
Sbjct 523 TTCCAGATGAGATTGGAAACTGTGTTTCTCTTGCTTATGTGGATTTCTCC-ACCAATTTG 581
Query 564 TTATATGGTGACATACC-TTTCTCAATCTCTAAACTCAAGCAGCTTGAAACTCTGAATCT 622
|| | ||| |||||||| ||| ||||||||||||||||| ||||| || |||||| ||
Sbjct 582 TTGTTTGGAGACATACCGTTT-TCAATCTCTAAACTCAAACAGCTGGAGTTTCTGAACCT 640
Query 623 GAAGAACAATCAGCTCACAGGCCCAGTACCAGCGACCTTAACCCAGATTCCAAACCTTAA 682
||||| ||||||||||| || ||| ||||||| |||||||| |||||||||||||||||
Sbjct 641 AAAGAATAATCAGCTCACTGGTCCAATACCAGCAACCTTAACTCAGATTCCAAACCTTAA 700
Query 683 GAGACTTGATCTTGCTGGCAATCATCTAACGGGTGAGATATCGAGATTGCTTTACTGGAA 742
|| ||||| || || | || || || || ||||||||| | || || || ||||||||
Sbjct 701 GACCCTTGACCTCGCAAGAAACCAGCTTACTGGTGAGATACCAAGGTTACTCTACTGGAA 760
Query 743 TGAAGTTTTGCAGTATCTCGGTTTACGTGGGAATATGTTGACTGGAACGTTATCTTCTGA 802
||||||||| ||||||||||||||||||||||||||||| ||||| || || ||| ||||
Sbjct 761 TGAAGTTTTACAGTATCTCGGTTTACGTGGGAATATGTTAACTGGGACATTGTCTCCTGA 820
Query 803 TATGTGTCAGCTAACCGGTTTATGGTACTTTGATGTGAGAGGAAATAATCTAACTGGAAC 862
|||||||||||| || ||| | |||||||||||||||||||| || || || ||||||||
Sbjct 821 TATGTGTCAGCTGACGGGTCTGTGGTACTTTGATGTGAGAGGCAACAACCTTACTGGAAC 880
Query 863 AATCCCTGAGAGCATTGGAAATTGCACAAGCTTTCAAATCCTGGACATATCTTATAATCA 922
||||| ||||||||||| ||||||||||||||| | ||| |||| |||||||||||||
Sbjct 881 TATCCCAGAGAGCATTGGCAATTGCACAAGCTTTGAGATCTTGGATGTATCTTATAATCA 940
Query 923 GATAACTGGAGAGATTCCTTACAACATCGGCTTTC-TCCAAGTTGCTACTCTGTCACTTC 981
||| || |||| || || ||||| || || |||| ||||||| ||||||||||||||||
Sbjct 941 GATTACCGGAGTTATACCCTACAATATTGG-TTTCCTCCAAGTAGCTACTCTGTCACTTC 999
Query 982 AAGGAAACA-GATTGACTGGTAGAATTCCAGAAGTTATAGGTCTAATGCAGGCTCTTGCT 1040
||||||||| | |||||||| |||||||| ||||| || ||||| |||||||||||||||
Sbjct 1000 AAGGAAACAAG-TTGACTGGCAGAATTCCGGAAGTGATTGGTCTGATGCAGGCTCTTGCT 1058
Query 1041 GTTTTGGATTTGAGTGATAATGAGCTTGT-TGGTCCTATACCACCGATACTTGGCAATCT 1099
|| |||||||||||||| ||||| || ||| ||||| ||||| |||||||| |||||
Sbjct 1059 GTATTGGATTTGAGTGACAATGAA-TTAACTGGGCCTATTCCACCAATACTTGGGAATCT 1117
Query 1100 CTCGTTTACCGGAAAGTTGTATCTCCATGGCAATAAGCTCACTGGTCCAATCCCATCTGA 1159
|| || || ||||| |||||||||||||||| ||||||||||| | ||||||| | ||
Sbjct 1118 GTCATTCACTGGAAAACTGTATCTCCATGGCAACAAGCTCACTGGACAAATCCCACCCGA 1177
Query 1160 GCTTGGGAATATGTCACGTCTCAGCTATTTGCAGCTAAATGACAATAAACTAGTCGGAAC 1219
||| || ||||||||||| |||||||||||||| |||||||| ||| ||||||| ||||
Sbjct 1178 GCTAGGCAATATGTCACGACTCAGCTATTTGCAACTAAATGATAATGAACTAGTGGGAAA 1237
Query 1220 TATTCCACCTGAGCTTGGTAAGCTGGAGCAATTGTTTGAATTGAATCTTGCCAACAACCG 1279
|| |||||||||||||| |||||||| |||||||| ||| |||||||||| ||||||
Sbjct 1238 GATCCCACCTGAGCTTGGGAAGCTGGAACAATTGTTCGAACTGAATCTTGCGAACAACAA 1297
Query 1280 T-TTGGTAGGGCCCATACCATCCAACATTAGTTCATGTGCAGCCTTGAATCAATTCAATG 1338
| ||| |||||| || ||||| ||||||||||| ||||| |||||||||||||||||||
Sbjct 1298 TCTTG-TAGGGCTGATTCCATCTAACATTAGTTCCTGTGCTGCCTTGAATCAATTCAATG 1356
Query 1339 TTCATGGGAACCTCTTAAGTGGATCTATACCACTGGCGTTTCGCAATCTCGGGAGTTTGA 1398
||||||||||| |||| |||||| || ||||||| | || || ||||| || || ||||
Sbjct 1357 TTCATGGGAACTTCTTGAGTGGAGCTGTACCACTTGAATTCCGGAATCTTGGAAGCTTGA 1416
Query 1399 CTTATCTAAATCTTTCGTCGAACAATTTCAAGGGGAAAATACCAGTTGAGCTTGGACATA 1458
|||||||||||||||| || |||| ||||||||| |||||||| | ||||||||| ||||
Sbjct 1417 CTTATCTAAATCTTTCCTCAAACAGTTTCAAGGGCAAAATACCTGCTGAGCTTGGCCATA 1476
Query 1459 TAATCAATCTTGACAAACTAGATCTGTCTGGCAATAACTTCTCAGGGTCTATACCATTAA 1518
| ||||||||||| | | | |||||||||||||| || |||||||| || || |||||||
Sbjct 1477 TCATCAATCTTGATACATTGGATCTGTCTGGCAACAATTTCTCAGGCTCAATTCCATTAA 1536
Query 1519 CGCTTGGTGATCTTGAACACCTTCTCATATTAAATCTA-AGCAGAAA-CTATCTTAGTGG 1576
| |||||||||||||| || |||||||| ||||| || |||||||| | |||| | |||
Sbjct 1537 CACTTGGTGATCTTGAGCATCTTCTCATCTTAAA-CTTGAGCAGAAATC-ATCTGAATGG 1594
Query 1577 -ACAATTGCCTGCAGAGTTTGGAAACCTTCGAAGCATTCAGATGATTGATGTATCATTCA 1635
||| ||||||||||| || || ||||| |||||||||||||| || ||||| ||||| |
Sbjct 1595 CACA-TTGCCTGCAGAATTCGGGAACCTCCGAAGCATTCAGATCATCGATGTGTCATTTA 1653
Query 1636 ATCTTATCT--CCGGAGTTATTCCAACTGAACTTGGCCAATTGCAGAATTTAAACTCTTT 1693
|| || ||| |||| ||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 1654 AT-TT-TCTTGCCGGTGTTATTCCAACTGAACTTGGCCAGTTGCAGAACATAAACTCTCT 1711
Query 1694 AATATTGAACTACAACAAGCTTCATGGGAAAATTCCAGATCAGCTTACGAATTGTTTC-G 1752
||| ||||| |||||||| ||||||||||||| || |||||||| || || || ||| |
Sbjct 1712 GATACTGAACAACAACAAGATTCATGGGAAAATCCCTGATCAGCTAACTAACTGCTTCAG 1771
Query 1753 CTCTTGTCAATCTGAATGTCTCCTTCAACAATCTCTCAGGGATAATCCCACCAATGAAAA 1812
||||| ||||||||| |||||||||| ||||| || || ||||||||||| ||||| |
Sbjct 1772 -TCTTGCCAATCTGAACATCTCCTTCAATAATCTTTCTGGAATAATCCCACCTATGAAGA 1830
Query 1813 ACTTCT-CACGTTTTGCTCCAGCCAGCTT-TGTTGGAAATCCATACCTTTGTGGAAACTG 1870
|||| | |||||||| | || |||||||| | |||||||||||| || || || |||||
Sbjct 1831 ACTT-TACACGTTTTTCCCCGGCCAGCTTCT-TTGGAAATCCATTTCTCTGCGGGAACTG 1888
Query 1871 GGTTGGATCTATATGCGGTCC-T-TTG-CCGAAATCCCGAGTATTCTCCAGAGGTGCTGT 1927
||||||||| || || || || | || || || || | ||||||| |||||| ||| ||
Sbjct 1889 GGTTGGATCAATCTGTGGCCCATCTTTACCTAAGTCACAAGTATTCACCAGAGTTGCCGT 1948
Query 1928 GATCTGCATTGTTCTTGGTGTCATCACTCTCCTATGTATGATTTTCCTCGCAGTTTACAA 1987
||| || || ||||| ||| ||||||||||| |||| ||||| ||| | || ||||||||
Sbjct 1949 GATTTGTATGGTTCTCGGTTTCATCACTCTCATATGCATGATATTCATTGCGGTTTACAA 2008
Query 1988 ATCGAAGCAGCAGAAGAAGATTCTAGAA-GGCCCCTCAAAACAAGCC-GAAGGCTCAACC 2045
|| ||||||||||| | | ||| ||| ||| | ||||||||| || ||||| |||||
Sbjct 2009 GTCAAAGCAGCAGAA-ACCAGTCTTGAAAGGCTCTTCAAAACAA-CCTGAAGGGTCAACG 2066
Query 2046 AAGCTAGTGATTCTCCACATGGACATGGCAATTCATACATTTGATGATATAATGAGAGTA 2105
||||| |||||||| |||||||||||||| ||||| || ||||||||||| ||||||||
Sbjct 2067 AAGCTGGTGATTCTTCACATGGACATGGCTATTCACACGTTTGATGATATCATGAGAGTT 2126
Query 2106 ACCGAGAATCTT-AGTGA-AAAGTTTATAATTGGATACGGTGCTTCTAGTACGGTATACA 2163
|| || || || | ||| ||| | || |||||||||||||||||||| || || ||||
Sbjct 2127 ACAGAAAACCTCGA-TGAGAAA-TACATCATTGGATACGGTGCTTCTAGCACAGTTTACA 2184
Query 2164 AATGTGCAT-TG-AAAAGTTCCCGACCTATTGCCATTAAGCGACTCTACAATCAGTATCC 2221
| ||||| | |||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2185 A--GTGCACCTCCAAAACTTCCCGACCTATTGCCATTAAGCGAATCTACAATCAGTATCC 2242
Query 2222 GCAT-AACTTGCGGGAATTTGAGACAGAACTCGAGACCATAGGGAGCATCAGGCACAGGA 2280
|| ||||| || || ||||| ||||| ||||||||||| ||||||||||| ||||| |
Sbjct 2243 -CAGCAACTTCCGCGAGTTTGAAACAGAGCTCGAGACCATTGGGAGCATCAGACACAGAA 2301
Query 2281 ACATAGTCAGCTTGCATGGATATGCCTTGTCTCC-TATTGGCAACCTTCTTTTCTATGAC 2339
||||||| |||||||| ||||| ||||| ||||| | |||||||||| || ||||| |||
Sbjct 2302 ACATAGTAAGCTTGCACGGATACGCCTTATCTCCCT-TTGGCAACCTCCTCTTCTACGAC 2360
Query 2340 TACATGGAAAATGGATCACTTTGGGACCTTCTTCATGGTTCACTG--AAGAAAGTGAAGC 2397
|||||||||||||| || |||||||| ||||| ||||| | ||| ||||| |||||||
Sbjct 2361 TACATGGAAAATGGCTCTCTTTGGGATCTTCTCCATGGG-C-CTGGGAAGAAGGTGAAGC 2418
Query 2398 TTGATTGGGAGACGAGGTTGAAGATAGCGGTTGGAGCTGCGCAAGGACTCGCCTATCTTC 2457
|||| ||||| || ||| |||||||||| |||||||||||||||||||| || |||||||
Sbjct 2419 TTGACTGGGAAACAAGGCTGAAGATAGCTGTTGGAGCTGCGCAAGGACTTGCATATCTTC 2478
Query 2458 ACCATGATTGTACTCCTCGGATTATTCACCGAGACATCAAGTCATCGAACATACTTCTTG 2517
||||||| || || ||| |||| || || ||||||||||||||||| |||||||| ||||
Sbjct 2479 ACCATGACTGCACACCTAGGATAATCCATCGAGACATCAAGTCATCAAACATACTCCTTG 2538
Query 2518 ATGAGAATTTCGAAGCACATTTATCGGATTTTGGGATTGCTAAGAGCATACCAGCGAGCA 2577
||| |||||||||||| | ||| || |||||||||||||| |||||||||||||| | ||
Sbjct 2539 ATGGGAATTTCGAAGCGCGTTTGTCAGATTTTGGGATTGCCAAGAGCATACCAGCCACCA 2598
Query 2578 AAACTCATGCTTCGACTTATGTT-TTGGGAACAATTGGTTATATAGACCCAGAGTATGCT 2636
||||| ||||||| || |||||| |||| ||| ||||| ||||| |||||||||||||||
Sbjct 2599 AAACTTATGCTTCAACCTATGTTCTTGG-AACCATTGGATATATTGACCCAGAGTATGCT 2657
Query 2637 CGTACTTCGCGTCTCAATGAGAAATCTGATATCTACAGCTTCGGGATTGTTCTTCTTGAG 2696
|| ||||||||||| || ||||| |||||||||||||| ||||| ||||| |||||||||
Sbjct 2658 CGAACTTCGCGTCTGAACGAGAAGTCTGATATCTACAGTTTCGGTATTGTCCTTCTTGAG 2717
Query 2697 CTTCTTACTGGAAAGAAAGCAGTAGATAACGAAGCTAACTTGCATCAACTGATAT-TGTC 2755
||||| || || ||||| || || |||||||| || |||||||||||| |||| | | ||
Sbjct 2718 CTTCTAACCGGCAAGAAGGCTGTGGATAACGAGGCCAACTTGCATCAAATGAT-TCTATC 2776
Query 2756 AAAGGCTGATGATAATACTGTGATGGAAGCAGTTGATCCAGAGGT-TACGGTGACATGTA 2814
|||||| |||||||| || || |||||||| |||||| ||||||| | | ||||| || |
Sbjct 2777 AAAGGCGGATGATAACACAGTAATGGAAGCTGTTGATGCAGAGGTCT-CAGTGACTTGCA 2835
Query 2815 TGGATTTGGGACATATCA-GAAAGACATTTCAGCTGGCTCTCTTATGCACAAAGCGAAAC 2873
|||| | ||||| |||| |||| ||||||||||| |||||||| ||||| ||||||||
Sbjct 2836 TGGACTCAGGACACATCAAGAAA-ACATTTCAGCTAGCTCTCTTGTGCACCAAGCGAAAT 2894
Query 2874 CCTTTAGAGAGACCCACAATGCTTGAAGTCTCTAGGGTTCTGCTCTCCCTTCTTCCATCT 2933
||||| ||||||||||| |||| || |||||||||||||||||||| ||| | || |||
Sbjct 2895 CCTTTGGAGAGACCCACCATGCAGGAGGTCTCTAGGGTTCTGCTCTCACTTGTCCCGTCT 2954
Query 2934 C 2934
|
Sbjct 2955 C 2955
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 162591062263
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5