BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496442
Length=2534
Score E
Sequences producing significant alignments: (Bits) Value
AT5G62620.1 | Symbols: | Galactosyltransferase family protein ... 3849 0.0
AT1G74800.1 | Symbols: | Galactosyltransferase family protein ... 686 0.0
> AT5G62620.1 | Symbols: | Galactosyltransferase family protein
| chr5:25136751-25139946 FORWARD LENGTH=2613
Length=2613
Score = 3849 bits (2084), Expect = 0.0
Identities = 2383/2523 (94%), Gaps = 38/2523 (2%)
Strand=Plus/Plus
Query 35 TTTATGTTTCTTTTGGGTTTTGAATTTTCTCACCAAAGATTTGTCTTTTCCA-AGGAAAG 93
|||| |||||||| ||||||||||||||||||| |||||||||||||||||| | |||||
Sbjct 106 TTTACGTTTCTTTCGGGTTTTGAATTTTCTCACTAAAGATTTGTCTTTTCCATA-GAAAG 164
Query 94 TTCTTG-ATTTTTTCTCTTCGTGTTTTAAGGGTTTTTC--AATTGAAACATTACCACATC 150
|||||| ||||| |||||||||||| ||||||||||| |||| | | | ||| || |
Sbjct 165 TTCTTGAATTTTCTCTCTTCGTGTTCAAAGGGTTTTTCAGAATTTATA-GTAACC-CACC 222
Query 151 AATCTACTGATTGTTTTCCGTTCATCGTGATTTCTCAAGATTTGAttttttttttttttt 210
||||||||||||| | |||||||||||| || ||||||||||||| ||||| ||| ||
Sbjct 223 AATCTACTGATTG-TCTCCGTTCATCGTAATCTCTCAAGATTTGA---TTTTTATTTGTT 278
Query 211 ttttGAAAATTTGAATTTTGAGATTCTGTTCCTCTTTGATCATCATCACTAGGG-TTTCT 269
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 279 TTTTGAAATTTTGAATTTTGAGATTCTGTTCCTCTTTGATCATCATCACTAGGGTTTTCT 338
Query 270 GTTTCCAG-T--AAAAAAGTTTGGATTTTTCTTCGTATAATTTAGGAATGAGGAAGCCCA 326
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 339 GTTTCCAGTTAAAAAAAAGTTTGGATTTTTCTTCGTATAATTTAGGAATGAGGAAGCCCA 398
Query 327 AGTTATCGAAACTCGAGAGGTTAGAGAAATTCGACATGTTCGTCTCTCTTAGCAAGCAGA 386
|||| || ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct 399 AGTTGTCAAAACTCGAGAGGTTAGAGAAATTCGACATTTTCGTTTCTCTAAGCAAGCAGA 458
Query 387 GATCTGTTCAGATACTAATGGCGGTTGGGTTACTCTACATGCTTCTAATCACATTCGAAA 446
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 459 GATCGGTTCAGATACTAATGGCGGTTGGGTTACTCTACATGCTTCTTATCACATTCGAAA 518
Query 447 TCCCTTTCGTCTTCAAAACCGGCCTTAGTTCTTTGTCTCAGGATCCGTTAACCCGACCCG 506
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 519 TCCCTTTCGTCTTCAAAACCGGGCTTAGTTCTTTATCTCAGGATCCGTTAACCCGACCCG 578
Query 507 AGAAGCATAATAGCCA-ACGAGAATTACAAGAGCGACGAGCTCCGAGTCGACCTTTTAAG 565
||||||| ||||| || | |||| ||||||||| |||||||||||| ||||||||| |||
Sbjct 579 AGAAGCACAATAGTCAGA-GAGAGTTACAAGAGAGACGAGCTCCGACTCGACCTTTAAAG 637
Query 566 AGTCTGCTTTACCAGGAATCACAATCGGAACCACCGGCTCAAGGTTTAAGAAGGAGCACT 625
|||||||||||||||||||||||||||||| |||||||||| ||||||||||| || |||
Sbjct 638 AGTCTGCTTTACCAGGAATCACAATCGGAATCACCGGCTCAGGGTTTAAGAAGAAGGACT 697
Query 626 CGGAT-CTTATCTAGTTTGAGATTTGACCCGGAAACGTTTAACCCGAGTAGCAAAGATGG 684
||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 698 CGGATCCTT-TCTAGTTTGAGATTCGACCCGGAAACGTTTAACCCGAGTAGCAAAGATGG 756
Query 685 GTCAGTGGAGCTTCACAAATCCGCTAAGGTAGCTTGGGAATTTGGTTGAAAGATATGGGA 744
||| ||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||
Sbjct 757 GTCTGTGGAGCTTCATAAATCTGCTAAGGTAGCTTGGGAAGTTGGTCGAAAGATATGGGA 816
Query 745 AGAGCTTGAGTCTGGGAAAACGTTGAAAGCTTTGGAGAAGGAGAAGAAGAAGAAGATTGA 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 817 AGAGCTTGAGTCTGGGAAAACGTTGAAAGCTTTGGAGAAGGAGAAGAAGAAGAAGATTGA 876
Query 805 GGAACATGGGTCAAACTCGTGCTCTCTCTCTGTTTCCTTAACCGGGTCTGATCTTTCGAA 864
|||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 877 GGAACATGGGACAAACTCGTGTTCTCTCTCTGTTTCCTTAACCGGGTCTGATCTTTTGAA 936
Query 865 ACGTGGGAATCTCATGGAGCTTCCATGTGGTTTAACTCTTGGGTCACATATTACAGTGGT 924
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 937 ACGTGGGAATATCATGGAGCTTCCATGTGGTTTAACTCTTGGGTCACATATTACAGTGGT 996
Query 925 TGGGAAGCCAAGAGCTGCTCATTCGGAGAAGGACCCGAAGATATCGATGTTAAAGGAAGG 984
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 997 TGGGAAGCCACGAGCTGCTCATTCGGAGAAGGACCCTAAGATATCGATGTTAAAGGAAGG 1056
Query 985 AGATGAAGCTGTTAAGGTTTCACAGTTTAAGTTGGAGCTTCAGGGTTTGAAAGCAGTTGA 1044
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1057 AGATGAAGCTGTGAAGGTTTCACAGTTTAAGTTGGAGCTTCAGGGTTTGAAAGCAGTGGA 1116
Query 1045 AGGAGAAGAGCCACCTCGGATACTCCACTTCAATCCAAGGCTTAAGGGTGATTGGAGTGG 1104
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1117 AGGAGAAGAGCCACCTCGGATACTCCACTTGAATCCAAGGCTTAAGGGTGATTGGAGTGG 1176
Query 1105 TAAGCCTGTCATTGAGCAGAACACTTGTTATAGAATGCAATGGGGCTCAGCACAAAGATG 1164
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1177 TAAGCCTGTGATTGAGCAGAACACTTGCTATAGAATGCAATGGGGCTCAGCACAAAGATG 1236
Query 1165 TGAAGGATGGAGATCTAGGGATGATGAAGAGACTGTTGATGGTCAGGTTAAGTGCGAGAA 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1237 TGAAGGATGGAGATCTAGGGATGATGAAGAGACTGTTGATGGTCAGGTTAAGTGCGAGAA 1296
Query 1225 ATGGGCTCGAGATGATAGCATTACATCT--A-AAGAAGAGTCTAGCAAGGCGGCTTCATG 1281
||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 1297 ATGGGCTCGGGATGATAGCATTACATCTAAAGAAGAAGAGTCTAGCAAGGCGGCTTCATG 1356
Query 1282 GTGGCTTAGTCGATTAATAGGTCGGAGCAAGAAAGTAACTGTTGAATGGCCATTTCCATT 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1357 GTGGCTTAGTCGATTAATAGGTCGGAGCAAGAAAGTAACTGTTGAATGGCCATTTCCATT 1416
Query 1342 CACAGTTGACAAGCTTTTCGTGCTTACACTTAGTGCTGGATTGGAAGGTTATCATGTTAG 1401
||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||
Sbjct 1417 CACAGTTGACAAGCTTTTCGTGCTTACTCTTAGTGCTGGATTGGAAGGCTACCATGTTAG 1476
Query 1402 TGTCGATGGGAAGCACGTTACATCCTTTCCATACCGAACTGGATTTACGCTTGAGGATGC 1461
||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct 1477 TGTCGATGGGAAGCATGTCACTTCCTTTCCATACCGAACTGGATTTACGCTTGAGGATGC 1536
Query 1462 TACTGGTCTAACCATTAACGGGGACATAGATGTTCACTCGGTTTTCGCTGGCTCTCTCCC 1521
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1537 TACTGGTCTAACCATTAACGGGGACATAGATGTTCACTCTGTTTTCGCTGGCTCTCTCCC 1596
Query 1522 AACCTCGCATCCTAGTTTTGCTCCTCAGAGGCATCTTGAGCTCTCGAGCAATTGGCAAGC 1581
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1597 AACCTCGCATCCTAGTTTTTCTCCTCAGAGGCATCTTGAGCTCTCGAGCAATTGGCAAGC 1656
Query 1582 CCCATCACTTCCTGATGAGCAAGTTGATATGTTCATTGGTATCCTTTCTGCTGGTAACCA 1641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657 CCCATCACTTCCTGATGAGCAAGTTGATATGTTCATTGGTATCCTTTCTGCTGGTAACCA 1716
Query 1642 TTTTGCTGAGCGGATGGCTGTGAGGAGGTCGTGGATGCAACATAAACTCGTTAAATCTTC 1701
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1717 TTTTGCTGAGAGGATGGCTGTGAGGAGGTCGTGGATGCAACATAAACTCGTTAAATCTTC 1776
Query 1702 CAAAGTTGTCGCTCGGTTCTTTGTTGCACTGCACTCGAGGAAAGAAGTAAATGTGGAGCT 1761
|||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1777 CAAAGTAGTGGCTCGGTTCTTTGTTGCACTGCACTCAAGGAAAGAAGTAAATGTGGAGCT 1836
Query 1762 AAAGAAGGAAGCTGAATTCTTTGGAGACATAGTTATAGTCCCTTACATGGACAGTTATGA 1821
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1837 AAAGAAGGAAGCTGAATTCTTTGGGGACATAGTTATAGTCCCTTACATGGACAGTTATGA 1896
Query 1822 CCTTGTCGTCCTCAAAACTGTTGCAATTTGCGAGTACGGGGCTCATCAACTTGCTGCTAA 1881
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 1897 CCTTGTCGTCCTCAAAACCGTTGCAATTTGCGAGTACGGGGCTCATCAACTTGCAGCTAA 1956
Query 1882 ATTCATCATGAAGTGTGATGATGATACATTTGTACAAGTGGATGCGGTTCTTAGTGAAGC 1941
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1957 ATTCATCATGAAGTGTGATGACGATACATTTGTACAAGTGGATGCGGTTCTTAGTGAAGC 2016
Query 1942 GAAGAGAACACCTGCCGATAGAAGTCTATACATTGGCAACATCAATTATTATCACAAACC 2001
|||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2017 AAAGAAAACACCCACAGATAGAAGTCTATACATTGGCAACATCAATTATTATCACAAACC 2076
Query 2002 GCTCCGCCAGGGTAAATGGGCTGTTACATATGAGGAATGGCCAGAGGAGGACTATCCACC 2061
|| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 2077 ACTTCGCCAGGGTAAATGGTCTGTTACATATGAGGAATGGCCAGAGGAAGACTATCCACC 2136
Query 2062 TTACGCTAATGGCCCTGGATACATATTATCAAACGATATCTCTCGCTTTATCGTGAAAGA 2121
||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2137 TTATGCTAATGGCCCCGGATACATATTATCAAACGATATATCTCGCTTTATCGTGAAAGA 2196
Query 2122 GTTTGAGAAACACAAATTAAGGATGTTCAAAATGGAAGATGTAAGTGTAGGAATGTGGGT 2181
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 2197 GTTTGAGAAACACAAATTAAGGATGTTCAAAATGGAAGATGTAAGCGTGGGAATGTGGGT 2256
Query 2182 AGAACAATTCAACAACGGTACAAAGCCGGTAGACTACATTCATAGCCTCAAGTTTTGTCA 2241
||||||||||||||| |||||||| ||||| ||||||||||| ||||||| |||||||||
Sbjct 2257 AGAACAATTCAACAATGGTACAAAACCGGTGGACTACATTCACAGCCTCAGGTTTTGTCA 2316
Query 2242 GTTTGGTTGCATAGAGAATTACTTGACGGCGCATTATCAGTCGCCGAGACAGATGATTTG 2301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2317 GTTTGGTTGCATAGAGAATTACTTGACGGCGCATTATCAGTCGCCGAGACAGATGATTTG 2376
Query 2302 CTTGTGGGATAAGTTGGTGTTGACAGGCAAACCTCAGTGCTGCAACATGAGATGACACAT 2361
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2377 CTTGTGGGATAAGCTGGTGTTGACAGGCAAACCTCAGTGCTGCAACATGAGATGACACAT 2436
Query 2362 ACCAAATCCTCTATTTCTCTTTGGTTTATAAGAGGAAATAGAAATTCGAAGAGGt-tttt 2420
|||||||||| | || || || ||||||||| ||||||||||| | ||||||| | ||||
Sbjct 2437 ACCAAATCCT-T-TT-CT-TT-GGTTTATAAAAGGAAATAGAAGTCCGAAGAGTTCTTTT 2491
Query 2421 t----gggttttttttt-t-G-ATATAGCTTT-GGTTGTATTATATCATCTT-GATCTTA 2471
| |||| | ||| | | |||||| ||| ||||||||||||||||||| ||||||
Sbjct 2492 TTTTTGGGTAGTAGTTTATAGCATATAG-TTTCGGTTGTATTATATCATCTTTGATCTTT 2550
Query 2472 AGCAACGAATCTAAAATAGATGTTTTCTTTTGGTCGAATTCTCTATTAATATTCTTTCTT 2531
|| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 2551 AGTAACGAATCTAAAATGGATGTTTTCTTTTGGTCGAATTCTCTATTAATATTCATTCTT 2610
Query 2532 TCC 2534
|||
Sbjct 2611 TCC 2613
> AT1G74800.1 | Symbols: | Galactosyltransferase family protein
| chr1:28101968-28105112 REVERSE LENGTH=2391
Length=2391
Score = 686 bits (371), Expect = 0.0
Identities = 1061/1388 (76%), Gaps = 71/1388 (5%)
Strand=Plus/Plus
Query 1000 GGTTTCACAGTTTAAGTTGGAGCTTCAGGGTTTGAAAG-CAGTTGAAGGAGAAGAGCCAC 1058
||| || |||||| | | |||||||| |||||| ||| | ||||||||||| || || |
Sbjct 791 GGTGTCTCAGTTTGTGATAGAGCTTCAAGGTTTG-AAGACTGTTGAAGGAGAGGATCCTC 849
Query 1059 CTCGGATACTCCACTTCAATCCAAGGCTTAAGGGTGATTGGAGTGGTAAGCCTGTCATTG 1118
|| |||| || || |||||||| ||||||||||| |||||||| || || || ||||
Sbjct 850 CTAGGATTCTGCATTTCAATCCGAGGCTTAAGGGAGATTGGAGCAAAAAACCGGTGATTG 909
Query 1119 AGCAGAACACTTGTTATAGAATGCAATGGGG-CTCAGCACAAAGATGTGAAGGATGG-AG 1176
||||||| | ||| ||||| ||||||||||| | | |||||| | || ||||||||| ||
Sbjct 910 AGCAGAATAGTTGCTATAGGATGCAATGGGGAC-CTGCACAACGTTGCGAAGGATGGAAG 968
Query 1177 ATCTAGGGATGATGAAGAGACTGTTGATGGTCAGGTTAAGTGCGAGAAATGGGCTCGAGA 1236
|| || ||||||||||||||||||||| |||| || ||||| || |||||| ||| ||
Sbjct 969 -TCAAGAGATGATGAAGAGACTGTTGATAGTCATGTGAAGTGTGAAAAATGGATTCGTGA 1027
Query 1237 TGATAG-C-ATTACATCTAAAGAAGAGTCTAGCAAGGCGGCTTCATGGTGGCTT-AGTCG 1293
|||| | | ||||| || ||||| ||| | | | ||| ||||||| || | | |
Sbjct 1028 TGAT-GACAATTAC-TC---AGAAGGGTC--G--A-G-GGCAAGATGGTGG-TTGAATAG 1075
Query 1294 A-TTAATAGGTCGGAGCAAGAA-AGT-AACTGTTGAATGGCCATTTCCATTCACAGTTGA 1350
| || ||||| |||| || || || || || |||||||| ||||| || | ||
Sbjct 1076 ACTT-ATAGGAAGGAGGAA-AAGGGTCAA-AGTAGAATGGCCGTTTCCTTTTGTGGAAGA 1132
Query 1351 CAAGCTTTTCGTGCTTACACTTAGTGCTGGATTGGAAGGTTATCATGTTAGTGTCGATGG 1410
||||| ||||| || || ||||| || || || || ||||| ||| | | ||| |||||
Sbjct 1133 GAAGCTGTTCGTTCTAACTCTTAGCGCCGGTTTAGAGGGTTACCATATCAATGTTGATGG 1192
Query 1411 GAAGCACGTTACATCCTTT-CCATACCGAACTGGATTT-ACGCTTGAGGATGCTACTGGT 1468
||||| ||||| | |||| || || || ||||| ||| || ||||||||||| || ||
Sbjct 1193 AAAGCATGTTAC-TTCTTTCCCTTATCGCACTGG-TTTCACCCTTGAGGATGCAACAGGG 1250
Query 1469 CTAACCA-TTAACGGGGACATAGATGTTCACTCGGTTTTCGCTGGCTCTCTCCCAACCTC 1527
|||| || | ||||| ||||| ||||| || || ||||| | || |||||| ||||| ||
Sbjct 1251 CTAA-CAGTAAACGGAGACATTGATGTCCATTCTGTTTTTGTTGCCTCTCTGCCAACATC 1309
Query 1528 GCATCCTAGTTTTGCTCCTCAGAGGCATCTTGAGCTCTC-GAGCA-ATTGGCAAGC-CCC 1584
||||||||||||||||| || |||||||| || | || || | | ||||| || ||
Sbjct 1310 ACATCCTAGTTTTGCTCCCCAAAGGCATCTCGAATTGTCAAAG-AGA-TGGCAGGCTCCT 1367
Query 1585 ATCACTTCCTGATGAGCAAGTTGATATGTTCATTGGTATCCTTTCTGCTGGTAACCATTT 1644
| | |||| |||| || || || || || || || || ||||| || || || |||||
Sbjct 1368 GT-AGTTCCCGATGGGCCTGTGGAGATCTTTATAGGCATTCTTTCCGCAGGCAATCATTT 1426
Query 1645 -TGCTGAGCGGATGGCTGTGAGGAGGTCGTGGATGCAACATAAACTCGTTAAATCTTCCA 1703
| ||||||||||||||||||||| || |||||||| ||| || ||| |||| | |
Sbjct 1427 CT-CTGAGCGGATGGCTGTGAGGAAATCCTGGATGCAGCATGTTCTTATTACATCTGCAA 1485
Query 1704 AAGTTGTCGCTCGGTTCTTTGTTGCACTGCACT-CGAGGAAAGAAGTAAATGTGGAGCTA 1762
||||||| ||||| |||||||| || ||||| | |||||| || || |||||||| |
Sbjct 1486 AAGTTGTTGCTCGTTTCTTTGTGGCGCTGCA-TGGGAGGAAGGAGGTGAATGTGGAATTG 1544
Query 1763 AAGAAGGAAGCTGAAT-TCTTTGGAGACATAGTTA-TAGTCCCTTACATGGACAGTTATG 1820
||||| ||||| || | | ||||| ||||| | || | || ||||||||||| || ||||
Sbjct 1545 AAGAAAGAAGCGGAGTAT-TTTGGGGACATTG-TACTTGTTCCTTACATGGATAGCTATG 1602
Query 1821 ACCTTGTCGTCCTCAAAACTGTTGCAATTTGCGAGTACGGGGCTCAT-CAACTT-GCTGC 1878
| |||||||| || ||||||||||| || || || |||| |||| | | | || ||||
Sbjct 1603 ATCTTGTCGTGCTGAAAACTGTTGCCATATGTGAACACGGAGCTCTTGC-A-TTCTCTGC 1660
Query 1879 TAAA-TTCATCATGAAGTGTGATGATGATACATTTGTACAA-GTGGATGCGGTTCTTAGT 1936
||| | ||| ||||||||||| ||||||||||||||| || ||| ||||| | | |
Sbjct 1661 -AAAGTACATAATGAAGTGTGACGATGATACATTTGTAAAACTTGG-CGCGGTGATCAAT 1718
Query 1937 GAAGCGAAGAGAA-CACCTGCCGATAGAAGTCTATACATTGGCAACATCAATTATTATCA 1995
|||| ||| | || ||| | | |||||| || |||||||| ||||| |||||||| ||
Sbjct 1719 GAAGTGAA-AAAAGTACCCGAAGGTAGAAGCCTGTACATTGGTAACATGAATTATTACCA 1777
Query 1996 CAAACCGCTCCGCCAGGGTAAATGGGCTGTTACATATGAGGAATGGCCAGAGGAGGACTA 2055
|||||| ||||| |||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1778 CAAACCTCTCCGTGGGGGTAAATGGGCAGTCACATATGAGGAATGGCCAGAGGAGGACTA 1837
Query 2056 TCCACCTTACGCTAATGG-CCCTGGATACATAT-TATCAAAC-GATATCT-CTCGCTTTA 2111
||| || ||||| ||||| ||| ||||| | | |||| | || || | | ||||| |
Sbjct 1838 TCCGCCCTACGCAAATGGACCC-GGATATGT-TCTATCTT-CTGACAT-TGCGCGCTTCA 1893
Query 2112 TCGTGAA-AGAGTTTGAGAAACACAAATTAAGGATGTTCAAAATGGAAGATGTAAGTGTA 2170
||||| | | ||||||||| ||| |||||| || ||||||| ||||| || || |||||
Sbjct 1894 TCGTGGACA-AGTTTGAGAGACATAAATTACGGCTGTTCAAGATGGAGGACGTGAGTGTG 1952
Query 2171 GGAATGTGGGTAGAACAATTCAACAACGGTACAAAGCCGGTAGACTACATTCATAGCCTC 2230
||||||||||| || || ||||| ||| ||||| || || || |||| || || ||
Sbjct 1953 GGAATGTGGGTTGAGCATTTCAAGAACACAACAAACCCAGTGGATTACAGACACAGTCTG 2012
Query 2231 AAGTTT-TGTCAGTTTGGTTGCATAGAGAATTACTTGACGGCGCATTATCAGTCGCCGAG 2289
| | || || ||||||||||| | ||||| |||| || || ||||| |||||||| ||
Sbjct 2013 A-GATTCTGCCAGTTTGGTTGTGTTGAGAACTACTACACAGCTCATTACCAGTCGCCAAG 2071
Query 2290 ACAGATGATTTGCTTGTGGGATAAGTTGGTGTTGACAGG-CAAACCTCAGTGCTGCAACA 2348
||||||||| ||||| ||||||||| | | ||||| ||| ||| |||| || ||||
Sbjct 2072 ACAGATGATATGCTTATGGGATAAGCTCTTAA-GACAGAACAAGCCTGAGTGTTGTAACA 2130
Query 2349 TGAGATGA 2356
||||||||
Sbjct 2131 TGAGATGA 2138
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 125768526101
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5