BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496451
Length=1645
Score E
Sequences producing significant alignments: (Bits) Value
AT5G62690.1 | Symbols: TUB2 | tubulin beta chain 2 | chr5:25181... 2510 0.0
AT5G62700.1 | Symbols: TUB3 | tubulin beta chain 3 | chr5:25184... 2433 0.0
AT2G29550.1 | Symbols: TUB7 | tubulin beta-7 chain | chr2:12644... 1382 0.0
AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042876-804... 1227 0.0
AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:28451... 1088 0.0
AT5G12250.1 | Symbols: TUB6 | beta-6 tubulin | chr5:3961106-396... 1079 0.0
> AT5G62690.1 | Symbols: TUB2 | tubulin beta chain 2 | chr5:25181415-25183729
FORWARD LENGTH=1726
Length=1726
Score = 2510 bits (1359), Expect = 0.0
Identities = 1561/1657 (94%), Gaps = 20/1657 (1%)
Strand=Plus/Plus
Query 2 GAGAGAGCAATAATAAAAACTCACTCACTCACACTTTT-TTCATTTCTCaaaaaaaCCC- 59
||| |||||||||||||| ||||||||||||||||||| |||||||||| |||||||
Sbjct 13 GAGTGAGCAATAATAAAAGCTCACTCACTCACACTTTTATTCATTTCTC-TGAAAACCCT 71
Query 60 TAAATCTCCCGATTTCGATTTCCGAGCCTCGAGAAAACCCTAAA-------T-CGTTCAC 111
||||||||| |||||||||| ||||| ||||| ||||||||||| | |||||||
Sbjct 72 TAAATCTCCGGATTTCGATTCCCGAGGCTCGAAAAAACCCTAAATCTCTTCTCCGTTCAC 131
Query 112 TAATTCAACCAAAGATGCGTGAGATTCTTCACATCCAGGGTGGTCAATGCGGTAACCAGA 171
| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 TCATCCAACCGAAGATGCGTGAGATTCTTCACATCCAGGGTGGTCAATGCGGTAACCAGA 191
Query 172 TCGGTGCCAAGTTCTGGGAAGTGGTTTGCGCCGAGCACGGCATCGATCCAACCGGAAGGT 231
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 192 TCGGCGCCAAGTTCTGGGAAGTGGTTTGCGCCGAGCACGGCATCGATCCAACCGGAAGGT 251
Query 232 ACACCGGAGACTCAGATCTGCAACTTGAGCGCATCAACGTTTACTACAATGAAGCCAGTT 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 252 ACACCGGAGACTCAGATCTGCAACTTGAGCGCATCAACGTTTACTACAATGAAGCGAGTT 311
Query 292 GCGGTAGATTCGTTCCTCGTGCTGTGCTCATGGATTTGGAGCCTGGGACTATGGATAGTC 351
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 312 GCGGTAGATTCGTTCCTCGTGCAGTGCTCATGGATTTGGAGCCTGGGACTATGGATAGTC 371
Query 352 TCAGATCTGGACCGTACGGTCAGACCTTTCGACCTGATAACTTCGTCTTTGGTCAATCCG 411
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 372 TCAGATCTGGACCGTACGGTCAGACCTTTCGACCTGATAACTTCGTCTTTGGCCAATCCG 431
Query 412 GTGCTGGTAACAACTGGGCCAAGGGTCACTACACTGAGGGAGCTGAGCTAATCGATTCCG 471
||||||||||||||||||||||||| |||||||| || |||||||| |||||||||||||
Sbjct 432 GTGCTGGTAACAACTGGGCCAAGGGACACTACACGGAAGGAGCTGAACTAATCGATTCCG 491
Query 472 TTCTCGATGTTGTTCGTAAGGAGGCTGAGAACTGTGACTGTCTCCAAGGGTTCCAGGTTT 531
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 492 TTCTCGATGTTGTTCGTAAGGAAGCTGAGAACTGTGACTGTCTCCAAGGGTTCCAGGTTT 551
Query 532 GCCATTCGTTGGGTGGAGGAACTGGATCTGGAATGGGAACACTGTTGATTTCTAAGATCC 591
| || |||||||| ||||||||||||||||| ||||||||| ||||||| ||||||||||
Sbjct 552 GTCACTCGTTGGGAGGAGGAACTGGATCTGGTATGGGAACATTGTTGATCTCTAAGATCC 611
Query 592 GTGAAGAGTACCCAGATCGAATGATGCTCACATTCTCAGTGTTCCCTTCACCAAAGGTTT 651
||||||||||||||||||| |||||||| || ||||| ||||||||||||||||||||||
Sbjct 612 GTGAAGAGTACCCAGATCGCATGATGCTTACCTTCTCGGTGTTCCCTTCACCAAAGGTTT 671
Query 652 CTGATACTGTGGTTGAACCTTACAACGCTACTTTGTCTGTTCATCAGCTTGTTGAGAATG 711
|||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 672 CTGATACTGTGGTTGAGCCTTACAACGCTACTCTGTCTGTCCATCAGCTTGTTGAGAATG 731
Query 712 CTGATGAGTGCATGGTTCTTGATAACGAGGCCTTGTACGATATTTGCTTCAGGACTCTCA 771
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 732 CTGATGAGTGCATGGTTCTTGATAATGAGGCCTTGTACGATATTTGCTTCAGGACTCTCA 791
Query 772 AACTCACTACCCCCAGCTTTGGTGATTTGAACCACTTGATTTCTGCCACTATGTCTGGTG 831
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 792 AACTCACTACCCCCAGCTTTGGTGATTTGAACCACTTGATTTCTGCTACTATGTCTGGTG 851
Query 832 TGACTTGCTGTCTGAGGTTCCCTGGTCAACTCAACTCTGATCTCCGTAAGCTTGCTGTGA 891
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 852 TGACTTGCTGTCTGAGGTTCCCTGGTCAACTCAACTCTGACCTCCGAAAGCTTGCTGTGA 911
Query 892 ATCTCATCCCTTTCCCTCGTCTCCACTTCTTCATGGTGGGTTTTGCTCCTCTCACCTCAA 951
|||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 912 ATCTCATCCCATTCCCCCGTCTTCACTTCTTCATGGTGGGTTTTGCTCCTCTCACCTCAA 971
Query 952 GAGGTTCTCAGCAATACCGTTCCCTCACAGTCCCTGAACTCACCCAGCAAATGTGGGACT 1011
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 972 GAGGTTCTCAGCAGTACCGTTCCCTCACAGTCCCTGAGCTCACCCAGCAAATGTGGGACT 1031
Query 1012 CCAAGAACATGATGTGTGCTGCAGACCCAAGACACGGACGCTACCTCACAGCCTCTGCCA 1071
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1032 CCAAGAACATGATGTGTGCTGCAGACCCAAGGCACGGACGCTACCTCACAGCCTCTGCCA 1091
Query 1072 TGTTCCGTGGCAAGATGAGCACAAAGGAAGTGGATGAACAGATGCTGAACGTGCAGAACA 1131
||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||
Sbjct 1092 TGTTCCGTGGCAAGATGAGCACAAAGGAAGTTGACGAGCAGATGCTGAATGTGCAGAACA 1151
Query 1132 AGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAATGTGAAATCAACAGTCTGTGACA 1191
||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||
Sbjct 1152 AGAACTCGTCCTACTTTGTGGAGTGGATCCCCAACAACGTGAAATCGACAGTCTGTGACA 1211
Query 1192 TCCCACCTACTGGTCTGAAGATGGCTTCCACTTTCATTGGTAACTCAACATCGATCCAAG 1251
||||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||
Sbjct 1212 TCCCACCTACTGGTCTGAAGATGGCATCAACTTTCATTGGAAACTCAACATCAATCCAAG 1271
Query 1252 AGATGTTCAGGCGTGTGAGTGAGCAGTTCACAGCTATGTTCAGGAGGAAGGCTTTCTTGC 1311
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1272 AGATGTTCAGGCGAGTGAGTGAGCAGTTCACAGCTATGTTCAGGAGAAAGGCTTTCTTGC 1331
Query 1312 ATTGGTACACAGGTGAGGGAATGGACGAGATGGAGTTCACAGAGGCAGAGAGCAACATGA 1371
|||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||
Sbjct 1332 ATTGGTACACAGGTGAGGGAATGGACGAGATGGAATTCACAGAAGCGGAGAGCAACATGA 1391
Query 1372 ACGATCTTGTTTCAGAGTACCAGCAATACCAGGACGCAACTGCAGATGAAGAAGGTGACT 1431
|||||||||| |||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct 1392 ACGATCTTGTGTCAGAGTACCAGCAATACCAAGATGCAACTGCGGATGAAGAAGGTGACT 1451
Query 1432 ACGAGGATGAGGAAGAAGGTGAATACCAACAGGAGGAAGAGTACTGAGAGTAATTTAGTT 1491
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1452 ACGAGGATGAGGAAGAAGGTGAATATCAACAGGAGGAAGAGTACTGAGAATAATTTAGTT 1511
Query 1492 ATAAACTGCTTTTAAGA-AAAA-CAATTTAGTCGTTTGCTACTGTTTTCTTTTTaaaaaa 1549
|||| ||||||| || | |||| |||||||||||||||||||| ||| |||||| |||
Sbjct 1512 ATAA-CTGCTTTAAAAACAAAAACAATTTAGTCGTTTGCTACT-TTT-CTTTTTTTTAAA 1568
Query 1550 aaaaGGAAAACCTCAACTACCAGTTGCAGGTTTTTTCTCTGCTTGTATTTGACATATCTG 1609
| |||| ||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 1569 A---GGAACACCTCAACTACCAGTTGTAGTTTTTTTCTCTGCTTGTATTTGACATATCTG 1625
Query 1610 GT-GATGTTTATGTGCTTTTGTTCTTAATCTCGTTAT 1645
|| ||||||| ||| |||||||||||||||| |||||
Sbjct 1626 GTTGATGTTTCTGTACTTTTGTTCTTAATCTTGTTAT 1662
> AT5G62700.1 | Symbols: TUB3 | tubulin beta chain 3 | chr5:25184397-25186711
FORWARD LENGTH=1742
Length=1742
Score = 2433 bits (1317), Expect = 0.0
Identities = 1502/1589 (95%), Gaps = 22/1589 (1%)
Strand=Plus/Plus
Query 64 TCTCCCGATTTCGATTTCCGAGCCTC--GAGAAAACCCTAAA-------T-CGTTCACT- 112
||||| |||||||||| ||||| ||| ||||||||| |||| | ||||||||
Sbjct 33 TCTCCAGATTTCGATTCCCGAGGCTCGAGAGAAAACCGTAAATCTCTTCTCCGTTCACTC 92
Query 113 AATTCAACCAAAGATGCGTGAGATTCTTCACATCCAGGGTGGTCAATGCGGTAACCAGAT 172
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 93 AA-TCAACCAAAGATGCGTGAGATTCTTCACATCCAGGGTGGTCAATGCGGTAACCAGAT 151
Query 173 CGGTGCCAAGTTCTGGGAAGTGGTTTGCGCCGAGCACGGCATCGATCCAACCGGAAGGTA 232
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 152 CGGAGCCAAGTTCTGGGAAGTGGTTTGCGCCGAGCACGGCATCGATCCAACCGGAAGGTA 211
Query 233 CACCGGAGACTCAGATCTGCAACTTGAGCGCATCAACGTTTACTACAATGAAGCCAGTTG 292
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 212 CACCGGAGACTCAGATCTGCAACTTGAGCGCATCAACGTTTACTACAATGAAGCGAGTTG 271
Query 293 CGGTAGATTCGTTCCTCGTGCTGTGCTCATGGATTTGGAGCCTGGGACTATGGATAGTCT 352
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 272 CGGTAGATTCGTTCCTCGTGCAGTGCTCATGGATTTGGAGCCTGGGACTATGGATAGTCT 331
Query 353 CAGATCTGGACCGTACGGTCAGACCTTTCGACCTGATAACTTCGTCTTTGGTCAATCCGG 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 332 CAGATCTGGACCGTACGGTCAGACCTTTCGACCTGATAACTTCGTCTTTGGTCAATCCGG 391
Query 413 TGCTGGTAACAACTGGGCCAAGGGTCACTACACTGAGGGAGCTGAGCTAATCGATTCCGT 472
||| |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct 392 TGCGGGTAACAACTGGGCCAAGGGACACTACACTGAAGGAGCTGAACTAATCGATTCCGT 451
Query 473 TCTCGATGTTGTTCGTAAGGAGGCTGAGAACTGTGACTGTCTCCAAGGGTTCCAGGTTTG 532
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 452 TCTCGATGTTGTTCGTAAGGAAGCTGAGAACTGTGACTGCCTCCAAGGGTTCCAGGTTTG 511
Query 533 CCATTCGTTGGGTGGAGGAACTGGATCTGGAATGGGAACACTGTTGATTTCTAAGATCCG 592
|| || ||||| ||||||||||||||||| ||||||||| ||||||| |||||||||||
Sbjct 512 TCACTCATTGGGAGGAGGAACTGGATCTGGTATGGGAACATTGTTGATCTCTAAGATCCG 571
Query 593 TGAAGAGTACCCAGATCGAATGATGCTCACATTCTCAGTGTTCCCTTCACCAAAGGTTTC 652
|||||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||
Sbjct 572 TGAAGAGTACCCAGATCGCATGATGCTTACCTTCTCGGTGTTCCCTTCACCAAAGGTTTC 631
Query 653 TGATACTGTGGTTGAACCTTACAACGCTACTTTGTCTGTTCATCAGCTTGTTGAGAATGC 712
|||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 632 TGATACTGTGGTGGAGCCTTACAACGCTACTTTATCTGTTCATCAGCTTGTTGAGAATGC 691
Query 713 TGATGAGTGCATGGTTCTTGATAACGAGGCCTTGTACGATATTTGCTTCAGGACTCTCAA 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 692 TGATGAGTGCATGGTTCTTGATAACGAGGCCTTGTACGATATTTGCTTCAGGACTCTCAA 751
Query 773 ACTCACTACCCCCAGCTTTGGTGATTTGAACCACTTGATTTCTGCCACTATGTCTGGTGT 832
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 752 ACTCACTACCCCCAGCTTTGGTGATTTGAACCATTTGATATCTGCCACTATGTCTGGTGT 811
Query 833 GACTTGCTGTCTGAGGTTCCCTGGTCAACTCAACTCTGATCTCCGTAAGCTTGCTGTGAA 892
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 812 GACTTGCTGTCTGAGGTTCCCTGGTCAACTCAACTCTGACCTCCGTAAGCTTGCTGTGAA 871
Query 893 TCTCATCCCTTTCCCTCGTCTCCACTTCTTCATGGTGGGTTTTGCTCCTCTCACCTCAAG 952
||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 872 TCTCATCCCATTCCCTCGTCTTCACTTCTTCATGGTTGGTTTTGCTCCTCTCACCTCAAG 931
Query 953 AGGTTCTCAGCAATACCGTTCCCTCACAGTCCCTGAACTCACCCAGCAAATGTGGGACTC 1012
|||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 932 AGGTTCACAGCAGTACCGCTCCCTCACAGTCCCTGAGCTCACCCAGCAAATGTGGGACTC 991
Query 1013 CAAGAACATGATGTGTGCTGCAGACCCAAGACACGGACGCTACCTCACAGCCTCTGCCAT 1072
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 992 CAAGAACATGATGTGTGCTGCAGACCCAAGGCACGGACGCTACCTCACAGCCTCTGCCAT 1051
Query 1073 GTTCCGTGGCAAGATGAGCACAAAGGAAGTGGATGAACAGATGCTGAACGTGCAGAACAA 1132
|||||||||||||||||||||||||||||| || || ||||||||||| || ||||||||
Sbjct 1052 GTTCCGTGGCAAGATGAGCACAAAGGAAGTTGACGAGCAGATGCTGAATGTTCAGAACAA 1111
Query 1133 GAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAATGTGAAATCAACAGTCTGTGACAT 1192
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1112 GAACTCGTCCTACTTTGTGGAGTGGATCCCCAACAACGTGAAATCAACAGTCTGTGATAT 1171
Query 1193 CCCACCTACTGGTCTGAAGATGGCTTCCACTTTCATTGGTAACTCAACATCGATCCAAGA 1252
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1172 CCCACCTACTGGTCTGAAGATGGCTTCCACTTTCATTGGAAACTCAACATCGATCCAAGA 1231
Query 1253 GATGTTCAGGCGTGTGAGTGAGCAGTTCACAGCTATGTTCAGGAGGAAGGCTTTCTTGCA 1312
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1232 GATGTTCAGGCGAGTGAGTGAGCAGTTCACAGCTATGTTCAGGAGGAAGGCTTTCTTGCA 1291
Query 1313 TTGGTACACAGGTGAGGGAATGGACGAGATGGAGTTCACAGAGGCAGAGAGCAACATGAA 1372
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1292 TTGGTACACAGGTGAGGGAATGGACGAGATGGAGTTCACAGAAGCAGAGAGCAACATGAA 1351
Query 1373 CGATCTTGTTTCAGAGTACCAGCAATACCAGGACGCAACTGCAGATGAAGAAGGTGACTA 1432
||||||||| |||||||||||||||||||| || ||||| || |||||||||||||||||
Sbjct 1352 CGATCTTGTGTCAGAGTACCAGCAATACCAAGATGCAACGGCTGATGAAGAAGGTGACTA 1411
Query 1433 CGAGGATGAGGAAGAAGGTGAATACCAACAGGAGGAAGAGTACTGAGAGTAATTTAGTTA 1492
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1412 CGAGGATGAGGAAGAAGGTGAATACCAACAGGAAGAAGAGTACTGAGAGTAATTTAGTTA 1471
Query 1493 TAAA--CTGCTTTTAAGAAAAACAATTTAGTCGTTTGCTACTGTTTTCTTTTTaaaaaaa 1550
|||| | |||| || |||| |||||||||||||||||||| |||| || |||||||||
Sbjct 1472 TAAAAACCGCTTG-AA-AAAATCAATTTAGTCGTTTGCTACT-TTTT-TTCTTAAAAAAA 1527
Query 1551 aaaG-GAAAACCTCAACTACCAGTTGCAGGTTT-TTTCTCTGCTTGTATTTGACATATCT 1608
||| || ||||||||||||||||||||||||| ||||| |||||||||||||| |||||
Sbjct 1528 AAAATGAGAACCTCAACTACCAGTTGCAGGTTTATTTCTATGCTTGTATTTGACTTATCT 1587
Query 1609 GG-TGATGTTTATGTGCTTTTGTTCTTAA 1636
|| |||||||||||| |||| ||| ||||
Sbjct 1588 GGATGATGTTTATGTACTTT-GTTTTTAA 1615
> AT2G29550.1 | Symbols: TUB7 | tubulin beta-7 chain | chr2:12644047-12646037
REVERSE LENGTH=1666
Length=1666
Score = 1382 bits (748), Expect = 0.0
Identities = 1146/1341 (85%), Gaps = 15/1341 (1%)
Strand=Plus/Plus
Query 123 AAGATGCGTGAGATTCTTCACATCCAGGGTGGTCAATGCGGTAACCAGATCGGTGCCAAG 182
|||||||||||||||||||| || || || ||||||||||| ||||| |||||| |||||
Sbjct 103 AAGATGCGTGAGATTCTTCATATTCAAGGAGGTCAATGCGGAAACCAAATCGGTTCCAAG 162
Query 183 TTCTGGGAAGTGGTTTGCGC-CGAGCACGGCATCGATCCA-ACCGGAAGGTACACCGGAG 240
|| |||||||||| || | ||||||||| || ||| || || ||| |||| ||||
Sbjct 163 TTTTGGGAAGTGG-TTAATCTCGAGCACGGGATTGAT-CAGACGGGACGGTATGTAGGAG 220
Query 241 ACTCAGA-TCTGCAACTTGAGCGCATCAACGTTTACTACAATGAAGCCAGTTGCGGTAGA 299
| || || | | || |||||| | | || || |||||||| || || ||||| || ||
Sbjct 221 ATTCCGAGT-TACAGCTTGAGAGGGTTAATGTATACTACAACGAGGCGAGTTGTGGAAGG 279
Query 300 TTCGTTCCTCGTGCTGTGCTCATGGATTTGGAGCCTGGGACTATGGATAGTCTCAGATCT 359
| ||||||||| ||||| |||||||||||||||||||| || ||||| ||| ||||||||
Sbjct 280 TACGTTCCTCGCGCTGTTCTCATGGATTTGGAGCCTGGAACCATGGACAGTGTCAGATCT 339
Query 360 GGACCGTACGGTCAGACCTTTCGACCTGATAACTTCGTCTTTGGTCAATCCGGTGCTGGT 419
|| ||||||||||||| ||||||||| |||||||||||||| ||||| |||||||||||
Sbjct 340 GGTCCGTACGGTCAGATCTTTCGACCGGATAACTTCGTCTTCGGTCAGTCCGGTGCTGGG 399
Query 420 AACAACTGGGCCAAGGGTCACTACACTGAGGGAGCTGAGCTAATCGATTCCGTTCTCGAT 479
|| |||||||| || |||||||||||||| || |||||||| || ||||| || || |||
Sbjct 400 AATAACTGGGCTAAAGGTCACTACACTGAAGGTGCTGAGCTTATTGATTCGGTCCTTGAT 459
Query 480 GTTGTTCGTAAGGAGGCTGAGAACTGTGACTGTCTCCAAGGGTTCCAGGTTTGCCATTCG 539
|||||||| || |||||||||||||||||||| || ||||| || ||||| ||||||||
Sbjct 460 GTTGTTCGCAAAGAGGCTGAGAACTGTGACTGCCTTCAAGGATTTCAGGTGTGCCATTCC 519
Query 540 TTGGGTGGAGGAACTGGATCTGGAATGGGAACACTGTTGATTTCTAAGATCCGTGAAGAG 599
||||| ||||||||||| |||||||||||||| ||||||| ||||||||| | || |||
Sbjct 520 TTGGGAGGAGGAACTGGTTCTGGAATGGGAACTTTGTTGATATCTAAGATCAGGGAGGAG 579
Query 600 TACCCAGATCGAATGATGCTCACATTCTCAGTGTTCCCTTCACCAAAGGTTTCTGATACT 659
|||||||| || |||||| | || ||||| |||||||| || || ||||| ||||| |||
Sbjct 580 TACCCAGACCGTATGATGATGACTTTCTCTGTGTTCCCATCGCCTAAGGTGTCTGACACT 639
Query 660 GTGGTTGAACCTTACAACGCTACTTTGTCTGTTCATCAGCTTGTTGAGAATGCTGATGAG 719
|| || || ||||||||||| || | ||||| || |||||||||||||| |||||||||
Sbjct 640 GTTGTGGAGCCTTACAACGCAACACTATCTGTGCACCAGCTTGTTGAGAACGCTGATGAG 699
Query 720 TGCATGGTTCTTGATAACGAGGCCTTGTACGATATTTGCTTCAGGACTCTCAAACTCA-C 778
|| ||||||||||| ||||| || ||||| || ||||||||| | || ||||| || | |
Sbjct 700 TGTATGGTTCTTGACAACGAAGCTTTGTATGACATTTGCTTCCGTACACTCAAGCTTAGC 759
Query 779 TACCCCCAGCTTTGGTGATTTGAACCACTTGATTTCTGCCACTATGTCTGGTGTGACTTG 838
|| || || ||||||||| ||||||||||||| ||||| || ||||||||||| || ||
Sbjct 760 -ACTCCAAGTTTTGGTGATCTGAACCACTTGATCTCTGCAACCATGTCTGGTGTAACCTG 818
Query 839 CTGTCTGAGGTTCCCTGGTCAACTCAACTCTGATCTCCGTAAGCTTGCTGTGAATCTCAT 898
|||||| ||||||||||||||||| ||||||||||| || ||||| ||||||||||| ||
Sbjct 819 CTGTCTTAGGTTCCCTGGTCAACTGAACTCTGATCTGCGAAAGCTAGCTGTGAATCTGAT 878
Query 899 CCCTTTCCCTCGTCTCCACTTCTTCATGGTGGGTTTTGCTCCTCTCACCTCAAGAGGTTC 958
||| ||||||||||||||||||||||||||||| ||||||||||||||||| | || ||
Sbjct 879 CCCATTCCCTCGTCTCCACTTCTTCATGGTGGGATTTGCTCCTCTCACCTCTCGTGGATC 938
Query 959 TCAGCAATACCGTTCCCTCACAGTCCCTGAACTCACCCAGCAAATGTGGGACTCC-AAGA 1017
|||||| |||||| |||||| ||||| || ||||| |||||||||||||| | | ||||
Sbjct 939 TCAGCAGTACCGTAACCTCACTGTCCCAGAGCTCACTCAGCAAATGTGGGA-TGCTAAGA 997
Query 1018 ACATGATGTGTGCTGCAGACCCAAGACACGGACGCTACCTCACAGCCTCTGCCATGTTCC 1077
|||||||||||||||| |||||||||||||| ||||||||||| || || ||||||||||
Sbjct 998 ACATGATGTGTGCTGCTGACCCAAGACACGGTCGCTACCTCACTGCTTCAGCCATGTTCC 1057
Query 1078 GTGGCAAGATGAGCACAAAGGAAGTGGATGAACAGATGCTGAACGTGCAGAACAAGAACT 1137
|||| ||||||||||| ||||| || |||||||||||||||||||| |||||||||||||
Sbjct 1058 GTGGAAAGATGAGCACCAAGGAGGTCGATGAACAGATGCTGAACGTACAGAACAAGAACT 1117
Query 1138 CGTCCTACTTTGTCGAGTGGATCCCCAACAATGTGAAATCAACAGTCTGTGACAT-CCCA 1196
| ||||||||||| || |||||||| ||||| || |||||||| ||||||||||| |||
Sbjct 1118 CCTCCTACTTTGTGGAATGGATCCCTAACAACGTCAAATCAACCGTCTGTGACATTCCC- 1176
Query 1197 CCTACTGGTCTGAAGATGGCTTCCACTTTCATTGGTAACTCAACATCGATCCAAGAGATG 1256
||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct 1177 CCTACTGGTCTGAAGATGGCTTCAACGTTCATTGGTAACTCAACTTCGATCCAAGAGATG 1236
Query 1257 TTCAGGCGTGTGAGTGAGCAGTTCACAGCTATGTTCAGGAGGAAGGCTTTCTTGCATTGG 1316
||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct 1237 TTCAGGCGTGTCAGTGAGCAATTCACTGCTATGTTCAGGAGAAAGGCTTTCTTGCATTGG 1296
Query 1317 TACACAGGTGAGGGAATGGACGAGATGGAGTTCACAGAGGCAGAGAGCAACATGAACGAT 1376
||||||||||| || ||||| |||||||||||||| || || || |||||||||||||||
Sbjct 1297 TACACAGGTGAAGGTATGGATGAGATGGAGTTCACTGAAGCTGAAAGCAACATGAACGAT 1356
Query 1377 CTTGTTTCAGAGTACCAGCAATACCAGGACGCAACTGCAGATGAAGAAGGTGACTACGAG 1436
||||| || ||||| ||||| || || || ||||| || ||||||||||| || || ||
Sbjct 1357 CTTGTCTCTGAGTATCAGCAGTATCAAGATGCAACGGCTGATGAAGAAGGAGAATATGA- 1415
Query 1437 GATGAGGAAGAAGGTGAATAC 1457
| |||||||||| ||| |||
Sbjct 1416 -A-GAGGAAGAAGCTGAGTAC 1434
> AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042876-8044819
FORWARD LENGTH=1727
Length=1727
Score = 1227 bits (664), Expect = 0.0
Identities = 1117/1338 (83%), Gaps = 22/1338 (2%)
Strand=Plus/Plus
Query 121 CAAAGATGCGTGAGATTCTTCACATCCAGGGTGGTCAATGCGGTAACCAGATCGGTGCCA 180
|||||||||| |||||||||||||| || ||||| |||||||| ||||||||||| || |
Sbjct 82 CAAAGATGCGAGAGATTCTTCACATACAAGGTGGCCAATGCGGAAACCAGATCGGAGCTA 141
Query 181 AGTTCTGGGAAGTGGTTTGCGCCGAGCACGGCATCGATCCAACCGGAAGGTA-CACCGGA 239
||||||||||||| ||||||||||||||||| |||||| | || ||||| || || |||
Sbjct 142 AGTTCTGGGAAGTAGTTTGCGCCGAGCACGGGATCGATTCGACGGGAAGATACCA-AGGA 200
Query 240 GACTCA-GATCTGCAACTTGAGCGCA-TCAACGTTTACTACAATGAAGCCAGTTGCGGTA 297
|| | ||| ||||||| || || | |||| || |||||||| ||||| |||||||| |
Sbjct 201 GA-GAACGATTTGCAACTCGAACG-AGTCAATGTCTACTACAACGAAGCGAGTTGCGGAA 258
Query 298 GATTCGTTCCTCGTGCTGTGCTCATGGATTTGGAGCCTGGGACTATGGATAGTCTCAGAT 357
||||||| || || || || ||||||||| | |||||||| |||||||||||| ||||||
Sbjct 259 GATTCGTCCCACGCGCCGTCCTCATGGATCTAGAGCCTGGTACTATGGATAGTGTCAGAT 318
Query 358 CTGGACCGTACGGTCAGACCTTTCGACCTGATAACTTCGTCTTTGGTCAATCCGGTGCTG 417
| || ||||||||||||| ||| || |||||||||||||| ||||||||||||||||| |
Sbjct 319 CCGGTCCGTACGGTCAGATCTTCCGTCCTGATAACTTCGTATTTGGTCAATCCGGTGCCG 378
Query 418 GTAACAACTGGGCCAAGGGTCACTACACTGAGGGAGCTGAGCTAATCGATTCCGTTCTCG 477
||||||| ||||| || || ||||||||||| || |||||||| ||||||||||||||||
Sbjct 379 GTAACAATTGGGCTAAAGGACACTACACTGAAGGTGCTGAGCTTATCGATTCCGTTCTCG 438
Query 478 ATGTTGTTCGTAAGGAGGCTGAGAACTGTGACTGTC-TCCAAGGGTTCCAGGTTTGCCAT 536
|||||||||||||||| |||||||| |||||||| | | ||||| ||||| || || ||
Sbjct 439 ATGTTGTTCGTAAGGAAGCTGAGAATTGTGACTG-CTTGCAAGGATTCCAAGTGTGTCAC 497
Query 537 TCGTTGGGTGGAGGAACTGGATCTGGAATGGGAACACTGTTGATTTCTAAGATCCGTGAA 596
|| || || |||||||||||||||||||||||||| |||||||||| ||||| | |||
Sbjct 498 TCATTAGGAGGAGGAACTGGATCTGGAATGGGAACGTTGTTGATTTCAAAGATTAGGGAA 557
Query 597 GAGTACCCAGATCGAATGATGCTCACATTCTCAGTGTTCCCTTCACC-AAAGGTTTCTGA 655
||||| |||||| | |||||||| || || || || ||||| ||||| ||| || || ||
Sbjct 558 GAGTATCCAGATAGGATGATGCTGACGTTTTCTGTATTCCCATCACCGAAA-GTGTCAGA 616
Query 656 TACTGTGGTTGAACCTTACAACGCTACTTTGTCTGTTCATCAGCTTGTTGAGAATGCTGA 715
||||| ||||| ||||| || || ||| | ||||||||||||||||| |||||||| ||
Sbjct 617 CACTGTTGTTGAGCCTTATAATGCAACTCTCTCTGTTCATCAGCTTGTGGAGAATGCAGA 676
Query 716 TGAGTGCATGGTTCTTGATAACGAGGCCT-TGTACGATATTTGCTTCAGGACTCTCAAAC 774
|||||| ||||||||||| || || | || | || || ||||||||||| ||||| || |
Sbjct 677 TGAGTGTATGGTTCTTGACAATGAAG-CTCTCTATGACATTTGCTTCAGAACTCTTAAGC 735
Query 775 TCACTACCCCCAGCTTTGGTGATTTGAACCACTTGATTTCTGCCACTATGTCTGGTGTGA 834
|||| || || |||||||| || ||||| ||| | || ||||| || ||| |||||| |
Sbjct 736 TCACCACTCCAAGCTTTGGAGACTTGAATCACCTCATCTCTGCAACCATGAGTGGTGTCA 795
Query 835 CTTGCTGTCTGAGGTTCCCTGGTCAACTCAACTCTGATCTCCGTAAGCTTGCTGTGAATC 894
||||||| || | ||||| ||||| || |||||||| || || |||||||| ||||||
Sbjct 796 CTTGCTGCCTTCGTTTCCCGGGTCAGCTAAACTCTGACCTGCGCAAGCTTGCAGTGAATT 855
Query 895 TCATCCCTTTCCCTCGTCTCCACTTCTTCATGG-TGGGTTTTGCTCCTCTCACCTCAAGA 953
| ||||| ||||||||||||||||||||||||| |||| ||||| || ||||| || |
Sbjct 856 TAATCCCATTCCCTCGTCTCCACTTCTTCATGGTTGGG-TTTGCACCACTCACATCTCGT 914
Query 954 GGTTCTCAGCAATACCGTTCCCTCACAGTCCCTGAACTCACCCAGCAAATGTGGGACT-C 1012
|| || ||||||||| | || | || |||||||| ||||| || || |||||||| | |
Sbjct 915 GGATCACAGCAATACAGAGCCTTAACCGTCCCTGAGCTCACTCAACAGATGTGGGA-TGC 973
Query 1013 CAAGAACATGATGTGTGCTGCAGACCCAAGACACGGAC-GCTACCTCACAGCCTCTGCCA 1071
|||||| ||||||||||| || || ||| | ||||| | | ||| | |||||||| ||||
Sbjct 974 CAAGAATATGATGTGTGCAGCTGATCCACGCCACGG-CAGGTACTTGACAGCCTCAGCCA 1032
Query 1072 TGTTCCGTGGCAAGATGAGCAC-AAAGGAAGTGGATGAACAGATGCTGAACGTGCAGAAC 1130
||||| | ||||| |||||||| ||| ||||| || ||||||||| | ||||| ||||||
Sbjct 1033 TGTTCAGAGGCAAAATGAGCACGAAA-GAAGTTGACGAACAGATGATCAACGTTCAGAAC 1091
Query 1131 AAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAATGTGAAATCAACAGTCTGTGAC 1190
||||||||||| |||||||| || |||||||| ||||| ||||||||||| || ||||||
Sbjct 1092 AAGAACTCGTCATACTTTGTGGAATGGATCCCAAACAACGTGAAATCAACCGTGTGTGAC 1151
Query 1191 ATCCCACCTACTGGTCTGAAGATGGCTTCCACTTTCATTGGTAACTCAACATCGATCCAA 1250
|| ||||| || |||||||| |||||||| |||||||| || ||||| |||||||||||
Sbjct 1152 ATTCCACCAACAGGTCTGAAAATGGCTTCGACTTTCATCGGGAACTCGACATCGATCCAG 1211
Query 1251 GAGATGTTCAGGCGTGTGAGTGAGCAGTTCACAGCTATGTTCAGGAGGAAGGCTTTCTTG 1310
|||||||| ||||||||||| || ||||||||||| |||||||| || || |||||||||
Sbjct 1212 GAGATGTTTAGGCGTGTGAGCGAACAGTTCACAGCGATGTTCAGAAGAAAAGCTTTCTTG 1271
Query 1311 CATTGGTACACAGGTGAGGGAATGGACGAGATGGAGTTCACAGAGGCAGAGAGCAACATG 1370
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1272 CATTGGTACACAGGTGAAGGAATGGACGAGATGGAGTTCACAGAGGCAGAGAGCAACATG 1331
Query 1371 AACGATCTTGTT-TCAGAGTACCAGCAATACCAGGACGCAACTGCAGATGAAGAAGGTGA 1429
|| ||| ||| | |||||||| || || ||||| |||||||| || ||||| |||| |
Sbjct 1332 AATGAT-TTGGTATCAGAGTATCAACAGTACCAAGACGCAACGGCTGATGAGGAAGAAGG 1390
Query 1430 CTACGAGGATGAGGAAGA 1447
|| ||| |||| |||||
Sbjct 1391 GTATGAGTATGAAGAAGA 1408
> AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:28451141-28453640
REVERSE LENGTH=1619
Length=1619
Score = 1088 bits (589), Expect = 0.0
Identities = 1081/1321 (82%), Gaps = 23/1321 (2%)
Strand=Plus/Plus
Query 141 CACATCCAGGGTGGTCAATGCGGTAACCAGATCGGTGCCAAGTTCTGGGAAGTGGTTTGC 200
||| |||| || || |||||||||||||| |||||| |||| ||||||||||| | |||
Sbjct 54 CACGTCCAAGGCGGCCAATGCGGTAACCAAATCGGTTCCAAATTCTGGGAAGTTATCTGC 113
Query 201 GCCGAGCACGGCATCGATCCAACCGGAAGGTACACCGGAGA---CTCAGATCTGCAACTT 257
| ||| |||||| | ||||| |||||| | |||| ||| || | | ||||| || ||
Sbjct 114 GACGAACACGGCGTTGATCCCACCGGACGTTACAACGGTGATTCCGCCGATCTTCAGCTC 173
Query 258 GAGCGCATCAACGTTTACTACAATGAAGCCAGTTGCGGTAGATT-CGTTCCTCGTGCTGT 316
|| || ||||| ||||| ||||||||||| | | ||| | || |||||||||||||||
Sbjct 174 GAACGTATCAATGTTTATTACAATGAAGCTTCTGGTGGTCG-TTACGTTCCTCGTGCTGT 232
Query 317 GCTCATGGATTTGGAGCCTGGGACTATGGATAGTCTCAGATCTGGACCGTACGGTCAGAC 376
||||||||| | |||||||| |||||||||||| |||||||||| || ||||||||||
Sbjct 233 TCTCATGGATCTCGAGCCTGGTACTATGGATAGTATCAGATCTGGTCCCTACGGTCAGA- 291
Query 377 CTTT-CGACCTGATAACTTCGTCTTTGGTCAATCCGGTGCTGGTAACAACTGGGCCAAGG 435
||| || |||||||||||||||||||||||||||||||| || || || ||||| || |
Sbjct 292 TTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCCGGTGCCGGAAATAATTGGGCGAAAG 351
Query 436 GTCACTACACTGAGGGAGCTGAGCTAATCGATTCCGTTCTCGATGTTGTTCGTAAGGAGG 495
|||| || ||||| || ||||| || || ||| | ||||||||||||||||||||||| |
Sbjct 352 GTCATTATACTGAAGGTGCTGAACTTATTGATGCTGTTCTCGATGTTGTTCGTAAGGAAG 411
Query 496 CTGAGAACTGTGACTGTCTCCAAGGGTTCCAGGTTTGCCA-T-TCGTTGGGTGGAGGAAC 553
||||||||||||| || || |||||||| || || || || | || |||| ||||| ||
Sbjct 412 CTGAGAACTGTGATTGCCTTCAAGGGTTTCAAGTATGTCACTCTC-TTGGA-GGAGGCAC 469
Query 554 TGGATCTGGAATGGGAACACTGTTGATTTCTAAGATCCGTGAAGAGTACCCAGATC-GAA 612
|| || ||||||||||| || ||||| || ||||||||||| || |||||||| | |||
Sbjct 470 GGGTTCAGGAATGGGAACTCTCTTGATATCAAAGATCCGTGAGGAATACCCAGA-CAGAA 528
Query 613 TGATGCTCACATTCTCAGTGTTCCCTTCACCAAAGGTTTCTGATACTGTGGTTGAACCTT 672
|||||||||||||||| || ||||| || |||||||| || || || || ||||| || |
Sbjct 529 TGATGCTCACATTCTCTGTTTTCCCATCTCCAAAGGTCTCAGACACAGTCGTTGAGCCGT 588
Query 673 ACAACGCTACTTTGTCTGTTCATCAGCTTGTTGAGAATGCTGATGAGTGCATGGTTCTTG 732
|||| || ||| | || || || || ||||| |||||||||||||| |||||||| || |
Sbjct 589 ACAATGCAACTCTCTCAGTCCACCAACTTGTAGAGAATGCTGATGAATGCATGGTCCTCG 648
Query 733 ATAACGAGGC-CTTGTACGATATTTGCTTCAGGACTCTCAAACTCA-CTACCCCCAGCTT 790
| ||||| || ||| |||||||| || ||| | ||||||||||||| | || || |||||
Sbjct 649 ACAACGAAGCTCTT-TACGATATCTGTTTCCGCACTCTCAAACTCAGC-ACTCCTAGCTT 706
Query 791 TGGTGATTTGAACCACTTGATTTCTGCCACTATGTCTGGTGTGACTTGCTGTCTGAGGTT 850
||| || |||||||||||||| || || |||||| |||||||||||||| | | || ||
Sbjct 707 TGGAGACTTGAACCACTTGATCTCCGCAACTATGAGTGGTGTGACTTGCTCTTTAAGATT 766
Query 851 CCCTGGTCAACTCAACTCTGATCTCCGTAAGCTTGCTGTGAATCTCATCCCTTTCCCTCG 910
|||||| |||||||||||||| || | || || || ||||| || ||||| ||||||||
Sbjct 767 CCCTGGACAACTCAACTCTGACCTTAGGAAACTCGCCGTGAACCTTATCCCATTCCCTCG 826
Query 911 TCTCCACTTCTTCATGGTGGGTTTTGCTCCTCTCACCTCAAGAGGTTCTCAGCAATACCG 970
||| || ||||||||||| ||||| || |||||||| || | || ||||| || |||
Sbjct 827 TCTACATTTCTTCATGGTTGGTTTCGCCCCTCTCACTTCCCGTGGCTCTCAACAGTACA- 885
Query 971 T-TCCCTCACAGTCCCTGAACTCACCCAGCAAATGTGGGACTCCAAGAACATGATGTGTG 1029
| || ||||||||||| || || || ||||||||||||||| | ||||||||||||||||
Sbjct 886 TCTCTCTCACAGTCCCGGAGCTGACACAGCAAATGTGGGACGCTAAGAACATGATGTGTG 945
Query 1030 CTGCAGACCCAAGACACGGACGCTACCTCACAGCCTCTGCCATGTTCCGTGGCAAGATGA 1089
| || || ||| | |||||||| ||||||||||| || ||||||||||| || || ||||
Sbjct 946 CAGCTGATCCACGCCACGGACGTTACCTCACAGCTTCAGCCATGTTCCGAGGAAAAATGA 1005
Query 1090 GCACAAAGGAAGTGGATGAACAGATGCTGAACGTGCAGAACAAGAACTCGTCCTACTTTG 1149
|||||||||||||||| |||||||| || || || |||||||||||||| ||||||||||
Sbjct 1006 GCACAAAGGAAGTGGACGAACAGATCCTAAATGTCCAGAACAAGAACTCATCCTACTTTG 1065
Query 1150 TCGAGTGGATCCCCAACAATGTGAAATCAA-CAGTCTGTGACATCCCACCTACTGGTCTG 1208
| || |||||||| ||||||||||| || | | ||||| ||||| ||||| ||||| |
Sbjct 1066 TTGAATGGATCCCAAACAATGTGAAGTCCAGC-GTCTGCGACATTCCACCAACTGGAATC 1124
Query 1209 AAGATGGCTTCCAC-TTTCATTGGTAACTCAACATCGATCCAAGAGATGTTCAGGCGTGT 1267
|| ||||||||||| ||| | || ||||| || |||||||| || ||||||||| | ||
Sbjct 1125 AAAATGGCTTCCACGTTTG-TCGGAAACTCGACTTCGATCCAGGAAATGTTCAGGAGAGT 1183
Query 1268 GAGTGAGCAGTTCACAGCTATGTTCAGGAGGAAGGCTTTCTTGCATTGGTACACAGGTGA 1327
|| || |||||||| |||||||||||| | || ||||||||||||||||||||||| ||
Sbjct 1184 AAGCGAACAGTTCACGGCTATGTTCAGGCGTAAAGCTTTCTTGCATTGGTACACAGGAGA 1243
Query 1328 GGGAATGGACGAGATGGAGTTCACAGAGGCAGAGAGCAACATGAACGATCTTGTTTCAGA 1387
||||||||||||||||||||||| || ||||||||||||||||| ||||| || || ||
Sbjct 1244 AGGAATGGACGAGATGGAGTTCACTGAAGCAGAGAGCAACATGAATGATCTGGTCTCTGA 1303
Query 1388 GTACCAGCAATACCAGGACGCAACTGCAGATGAAGAAGGTGACTACGAGGATGAGGAAGA 1447
||||| |||||||| || || || || |||||||||| || || || || || |||||
Sbjct 1304 ATACCAACAATACCAAGATGCTACCGCTGATGAAGAAGACGAATATGATGAAGAAGAAGA 1363
Query 1448 A 1448
|
Sbjct 1364 A 1364
> AT5G12250.1 | Symbols: TUB6 | beta-6 tubulin | chr5:3961106-3963522
REVERSE LENGTH=1696
Length=1696
Score = 1079 bits (584), Expect = 0.0
Identities = 1101/1349 (82%), Gaps = 41/1349 (3%)
Strand=Plus/Plus
Query 123 AAGATGCGTGAGATTCTTCACATCCAGGGTGGTCAATGCGGTAACCAGATCGGTGCCAAG 182
|||||| | || || |||||||| || ||||||||||| || |||||||| ||| |||||
Sbjct 133 AAGATGAGAGAAATCCTTCACATTCAAGGTGGTCAATGTGGGAACCAGATTGGTTCCAAG 192
Query 183 TTCTGGGAAGTGGTTTGCGCCGAGCACGGCATCGATCCAACCGGAAGGTACACCGGAGAC 242
||||||||||| || || | ||||| || || ||||| || || | ||| ||| ||
Sbjct 193 TTCTGGGAAGTTGTATGTGATGAGCATGGTATTGATCCCACTGGTCGTTACGTTGGAAAC 252
Query 243 TCAGATCTGCAACTT-GAGCGCATCAACGTTTACTACAATGAAGCCAGT--TGCGGTAGA 299
|| ||||||| | || ||||| |||| |||||||| || | || || | ||||| |||
Sbjct 253 TCTGATCTGC-AGTTGGAGCGTGTCAATGTTTACTATAACG-AGGCA-TCCTGCGGAAGA 309
Query 300 T-TCGTTCCTCGTGCTGTGCTCATGGAT-TTGGAGCCTGGGACTATGGATAGTCTCAGAT 357
| | ||||| ||||| | ||||||||| || |||||||| |||||||| ||| |||||
Sbjct 310 TAT-GTTCCCCGTGCAATTCTCATGGATCTT-GAGCCTGGTACTATGGACAGTGTCAGAA 367
Query 358 CTGGACCGTACGGTCAGACCTTTC-GACCTGATAACTTCGTCTTT-GGTCAATCCGGTGC 415
||||||| || ||||| | | ||| | ||||| ||||| || ||| || ||||| |||||
Sbjct 368 CTGGACCTTATGGTCAAATC-TTCAGGCCTGACAACTTTGT-TTTCGGGCAATCTGGTGC 425
Query 416 TGGTAACAACTGGGC-CAAGGGTCACTACACTGAGGGAGCTGAGCTAATCGATTCCGTTC 474
||| ||||||||||| ||||| || |||||||| ||||||||||| || ||| | || |
Sbjct 426 TGGAAACAACTGGGCTAAAGGG-CATTACACTGAAGGAGCTGAGCTTATTGATGCTGTAC 484
Query 475 TCGATGTTGTTCGTAAGGAGGCTGAGAACTGTGACTGTCTCCAAGGGTTCCAGGTTTGCC 534
|||||||||| || || ||||||||||| || |||||||| ||||| ||||| || || |
Sbjct 485 TCGATGTTGTACGCAAAGAGGCTGAGAATTGCGACTGTCTTCAAGGTTTCCAAGTATGTC 544
Query 535 ATTC-GTTGGGTGGAGGAACTGGATCTGGAATGGGAACACTGTTGATTTCTAAGATCCGT 593
| || || |||||||| || || |||||||||||||| ||| | || ||||||||| |
Sbjct 545 ACTCACTT-GGTGGAGGCACCGGGTCTGGAATGGGAACTCTGCTCATATCTAAGATCAGG 603
Query 594 GAAGAGTACCCAGATCGAATGATGCTCACATTCTCAGTGTTCCCTTCACCAAAGGTTTCT 653
|||||||| || ||| |||||||||| ||||| || || ||||| ||||||||||| |||
Sbjct 604 GAAGAGTATCCTGATAGAATGATGCTTACATTTTCTGTCTTCCCATCACCAAAGGTCTCT 663
Query 654 GATACTGTGGTTGAACCTTACAACGCTAC-TTTGTCTGTTCATCAGCTTGTTGAGAATGC 712
|| || |||||||| || ||||| || || || || ||||||||||| || || |||||
Sbjct 664 GACACAGTGGTTGAGCCATACAATGCGACACTT-TCAGTTCATCAGCTGGTGGAAAATGC 722
Query 713 TGATGAGTGCATGGTTCTT-GATAACG-AGGCCTTGTACGATATTTGCTTCAGGACTCTC 770
||||||||| |||||| || || || | || |||| ||||| || || || || || ||
Sbjct 723 TGATGAGTGTATGGTT-TTGGACAATGAAGCCCTT-TACGACATCTGTTTTAGAACACTT 780
Query 771 AAACTCACTACCCCCAGCTTTGGTGATTTGAACCA-CTTGATTTCTGCCACTATGTCTGG 829
|| || || || || |||||||||||| |||| || ||| || ||||| || ||| |||
Sbjct 781 AAGCTTACCACTCCTAGCTTTGGTGATCTGAATCATCTT-ATCTCTGCAACCATGAGTGG 839
Query 830 TGTGACTTGCTGTCTGAGGTTCCCTGGTCAACTCAACTCTGATCTCCGTAAGCTTGCTGT 889
|| || |||||||| |||||||| ||||| |||||||||||||| | ||||| || ||
Sbjct 840 AGTTACATGCTGTCTTAGGTTCCCGGGTCAGCTCAACTCTGATCTGAGGAAGCTCGCAGT 899
Query 890 GAATCTCATCCCTTTCCCTCGTCTCCACTTCTTCATGGTGGGTTTTGCTCCTCTCACCTC 949
||| ||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||
Sbjct 900 GAACCTCATTCCTTTCCCTCGTCTCCACTTTTTCATGGTTGGTTTTGCCCCTCTCACCTC 959
Query 950 AAGAGGTTCTCAGCAATACCGTTCCCTCACAGTCCCTGAACTCACCCAGCAAATGTGGGA 1009
| || |||||||| |||||| | ||||| |||||||| || ||||| || ||||||||
Sbjct 960 CCGTGGGTCTCAGCAGTACCGTGCACTCACTGTCCCTGAGCTGACCCAACAGATGTGGGA 1019
Query 1010 CTCCAAGAACATGATGTGTGCTGCAGACCCAAGACACGGACGCTACCTCACAGCCTCTGC 1069
|| |||||||||||||| || |||||||| | ||||| || ||||| || ||||| ||
Sbjct 1020 TTCAAAGAACATGATGTGCGCAGCAGACCCGCGCCACGGGCGGTACCTAACTGCCTCGGC 1079
Query 1070 CATGTTCCGTGGCAAGATGAGCACAAAGGAAGTGGATGAACAGATGCTGAACGTGCAGAA 1129
||||||||||||||||||||||||||| |||||||| || |||||| | ||||| |||||
Sbjct 1080 CATGTTCCGTGGCAAGATGAGCACAAAAGAAGTGGACGAGCAGATGATAAACGTACAGAA 1139
Query 1130 CAAGAACTCGTCCTACTTTGTCGAGTGGATCCCCAACAATGTGAAATCAA-CAGTCTGTG 1188
||| ||||| ||||||||||| || ||||| || ||||| ||||| |||| | |||||||
Sbjct 1140 CAAAAACTCTTCCTACTTTGTGGAATGGATTCCAAACAACGTGAAGTCAAGC-GTCTGTG 1198
Query 1189 ACAT--C-CCACCTACTGGTCTGA-AGATGGCTTCCAC-TTTCATTGGTAACTCAACATC 1243
|||| | || || | ||||| | ||||| || || ||| ||||| || || |||||
Sbjct 1199 ACATAGCTCC-CCGA--GGTCTCTCA-ATGGCATCGACATTT-ATTGGGAATTCCACATC 1253
Query 1244 GATCCAAGAGATGTTCAGGCGTGTGAGTGAGCAGTTCACAGCTATGTTCAGGAGGAAGGC 1303
||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||
Sbjct 1254 GATCCAAGAGATGTTTAGGCGGGTGAGCGAGCAGTTCACTGCTATGTTCAGGAGGAAAGC 1313
Query 1304 TTTCTTGCATTGGTACACAGGTGAGGGAATGGACGAGATGGAGTTCACAGAGGCAGAGAG 1363
|||||||||||||||||||||||| |||||||||||||||||||| || || || |||||
Sbjct 1314 TTTCTTGCATTGGTACACAGGTGAAGGAATGGACGAGATGGAGTTTACTGAAGCTGAGAG 1373
Query 1364 CAACATGAACGATCTTGTTTCAGAGTACCAGCAATACCAGGACGCAACTGCAGATGAAGA 1423
||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1374 CAACATGAACGATCTAGTCTCAGAGTACCAGCAATACCAAGACGCAACTGCAGATGACGA 1433
Query 1424 AGGTGACTACGA-G--GATGAGGAAGAAG 1449
||| || || || | || ||||| ||||
Sbjct 1434 AGGCGAGTATGAAGAAGACGAGGATGAAG 1462
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81274682355
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5