BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496466 Length=618 Score E Sequences producing significant alignments: (Bits) Value AT5G62830.1 | Symbols: | F-box associated ubiquitination effec... 754 0.0 > AT5G62830.1 | Symbols: | F-box associated ubiquitination effector family protein | chr5:25226168-25226782 REVERSE LENGTH=615 Length=615 Score = 754 bits (408), Expect = 0.0 Identities = 484/520 (93%), Gaps = 7/520 (1%) Strand=Plus/Plus Query 14 TGGAAATTTATGAGTTTACCTCTAATTCATGGAGGAATCTTGATGCGATCATTCCCGATC 73 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2 TGGAAATGTATGAGTTTACCTCTAATTCATGGAGGAATCTTGATGTGATCATTCCCGATC 61 Query 74 AGGCCTACTTAAAAAGTGATGGCCATGCGTGTGCGTCTTTAAGTGGAAATACTTATTGGG 133 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 62 AGGCCTACTTAAAATGTGATGGTCATGCGTGTGCGTCTTTAAGTGGAAATACTTATTGGG 121 Query 134 TGTCGTGGATTAAAAAAGGAGACAACGACGACTACTCACTACTCAGTTTTGATTTTTCAA 193 |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 122 TGTCATGGATTGAAAAAGGAGACAACGACGACTACTCACTACTCAGTTTTGATTTTTCAA 181 Query 194 CAGAAAGGTTTCAACGTTTGTGTGCTCCCTTTCATCATCAACCATGCCGTGTTGATACTA 253 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 182 CAGAAAGGTTTCAACGTTTGTGTGCTCACTTTCATCATCAACCATGCCGTGTTGATACTA 241 Query 254 TGGCTCTCTCGGTTGTTAGAGAAGAACATCTTTCCTTGTTTTATCAGAGTAGACAGACAC 313 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 242 TTGCTCTCTCGGTTGTTAGAGAAGAACATCTTTCCTTGTTTTATCAGAGTAGGCAGACAC 301 Query 314 TAAAAGTGGAAATATGGATGACCGATGAGATTCATACAACATTTGTGTCGTGGAGCAAGT 373 |||| |||||||||||| |||||| ||||||| | || |||||||| ||||||||||||| Sbjct 302 TAAAGGTGGAAATATGGGTGACCGTTGAGATTGAGACCACATTTGTCTCGTGGAGCAAGT 361 Query 374 TCTTAACATTAGATTTAGTTTCTCCTTCTTTTTCGA-ATTCCATGAGCTTCTATATTGTT 432 ||||||||||||||||||||||||||| ||| |||| || | ||||||||||||||| || Sbjct 362 TCTTAACATTAGATTTAGTTTCTCCTTGTTTATCGAGAT-CAATGAGCTTCTATATTCTT 420 Query 433 GACGAGGAGAAGAAAGTTGTTGTGTGTTGTG-TGGAAGACGGAT-TTT-T-CGACTCCAA 488 || |||||||||||| ||||||||||||||| || ||| || | ||| | | ||||||| Sbjct 421 GATGAGGAGAAGAAAATTGTTGTGTGTTGTGATGAAAG-CGAAAATTTCTACTACTCCAA 479 Query 489 ATTGGTATGGATTGTTAGAGAAGGAGAAGAATATATACCA 528 |||||||||||||| |||||||||| ||||||||| |||| Sbjct 480 ATTGGTATGGATTGCTAGAGAAGGACAAGAATATAGACCA 519 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29788849171 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5