BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496474
Length=2156
Score E
Sequences producing significant alignments: (Bits) Value
AT5G62890.1 | Symbols: | Xanthine/uracil permease family prote... 3243 0.0
AT5G49990.1 | Symbols: | Xanthine/uracil permease family prote... 1051 0.0
> AT5G62890.1 | Symbols: | Xanthine/uracil permease family protein
| chr5:25243417-25247377 FORWARD LENGTH=2207
Length=2207
Score = 3243 bits (1756), Expect = 0.0
Identities = 2079/2220 (94%), Gaps = 81/2220 (4%)
Strand=Plus/Plus
Query 1 GTGTGGCTTTACCTTTTGTACCTAAACCTCTCACActctctctctctGGCTTGCTG--T- 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1 GTGTGGCTTTACCTTTTGTACCTAAACCTCTCACACTCTCTCTCTCTGGCTTGCTGTTTA 60
Query 58 -T-T-A----CTCCTTTACTTCATTCGTCTTCTTCCTCTCTTTCCCAGAAGCTGCCCATT 110
| | | ||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 61 CTCTCATCGTCTCCTTTACTTCATTCGTCTTCTTCCTCTCTTTCCCACAAGCT-CCCATT 119
Query 111 GATGTGAGTTATCACCACCTCTCTTTTCTTTTTGCACTGATTTGTGC--TT-C--GCTTA 165
|||||||||| || | || ||||||||||| | | ||||||| | || | ||
Sbjct 120 GATGTGAGTT-TC-TTA--TCACTTTTCTTTTT-C-C-GATTTGT-CAATTCCTTTTTTG 171
Query 166 CAC--A--T-TGC--AGC-T-CTTTTTTCTGGTAGATTCCCCGATCTGGGGCTTTTCTTA 216
||| | | ||| || | | || || ||||||||||||||||||| ||||||||
Sbjct 172 CACTGATTTGTGCTTCGCTTACACATTGCTAGTAGATTCCCCGATCTGGGTTTTTTCTTA 231
Query 217 TTCGTGTTCTTCATACTAAAGTTTGATGCTTTTTTGTGGGTTTTGCAGATagagagagag 276
||||||||| ||||||||||||||| ||||||||||| | |||| | | ||| ||||
Sbjct 232 TTCGTGTTCATCATACTAAAGTTTGGTGCTTTTTTGT--G-TTTG-TG-T--AGATAGAG 284
Query 277 agagagaTTTAAGGAAGGAATCATGGCAGGGGGTGGAGCTCCAGCACCCAAAGCAGACGA 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 285 AGAGAGATTTAAGGAAGGAATCATGGCAGGGGGTGGAGCTCCAGCACCCAAAGCAGACGA 344
Query 337 ACCACAACCACATCCTCCTAAAGATCAACTTCCCAACATTTCTTATTGCATCACCAGTCC 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 345 ACCACAACCACATCCTCCTAAAGATCAACTTCCCAACATTTCTTATTGCATCACCAGTCC 404
Query 397 TCCTCCTTGGCCCGAAGCTATTCTTCTTGGATTTCAACATTACCTTGTGATGCTTGGGAC 456
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 405 TCCTCCTTGGCCTGAAGCTATTCTTCTTGGATTCCAACATTACCTTGTGATGCTTGGGAC 464
Query 457 AACAGTCCTCATACCTACTGCTCTTGTTCCCCAGATGGGAGGTGGATATGAAGAGAAGGC 516
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 465 AACGGTGCTCATACCTACTGCTCTTGTTCCCCAGATGGGAGGTGGATATGAAGAGAAGGC 524
Query 517 AAAGGTGATCCAGACTATTCTCTTTGTTGCTGGCATCAACACATTGCTCCAAACACTTTT 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 525 AAAGGTGATCCAGACTATTCTCTTTGTTGCTGGCATCAACACATTGCTCCAAACACTGTT 584
Query 577 CGGGACTAGATTGCCTGCTGTTATTGGAGCATCCTACACATTCGTACCAACAACGATATC 636
||| |||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||
Sbjct 585 CGGTACTAGATTGCCTGCTGTTGTTGGAGCTTCCTACACATTCGTGCCAACAACGATATC 644
Query 637 CATAATCCTCTCTGGCAGATTCAGTGATACCTCAAACCCTATAGATCGCTTTGAGAGGAT 696
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 645 CATAATCCTCTCTGGCAGATTCAGTGATACCTCGAACCCTATAGATCGCTTTGAGAGGAT 704
Query 697 AATGCGGGCAACCCAAGGCGCCTTGATTGTTGCTTCTACCCTGCAGATGATTCTTGGTTT 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 705 AATGCGGGCAACCCAAGGCGCCTTGATTGTTGCTTCTACCCTGCAGATGATTCTTGGTTT 764
Query 757 CAGTGGTCTCTGGCGAAATGTTGTTAGGTTCTTAAGTCCTATTTCAGCTGTTCCACTGGT 816
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 765 CAGTGGTCTCTGGCGTAATGTTGTTAGGTTCTTAAGTCCTATTTCAGCTGTTCCACTGGT 824
Query 817 GGGTCTCGTTGGTTTTGGGCTGTATGAGTTTGGTTTCCCGGGGGTTGCTAAATGCATAGA 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 825 GGGTCTCGTTGGTTTTGGGCTGTATGAGTTTGGTTTCCCGGGGGTTGCTAAATGCATAGA 884
Query 877 GATTGGACTGCCTGAGCTTCTTATTCTAGTATTCGTTTCACAGTACCTGCCTCATGTGAT 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 885 GATTGGACTGCCTGAGCTTCTTATTCTAGTATTCGTTTCACAGTACCTGCCTCATGTGAT 944
Query 937 CAAATCAGGGAAAAATGTGTTTGACCGATTTGCTGTGATATTCGCGGTGGTGATTGTGTG 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 945 CAAATCAGGGAAAAATGTGTTTGACCGATTTGCTGTGATATTCGCGGTGGTGATTGTGTG 1004
Query 997 GATCTATGCTCATCTTCTTACAGTTGGTGGGGCCTACAATGGTGCTGCACCAACTACACA 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1005 GATCTATGCTCATCTTCTTACAGTTGGTGGGGCCTACAATGGTGCTGCACCAACTACTCA 1064
Query 1057 AACAAGTTGTCGGACAGATCGTGCTGGAATCATAGGTGCTGCCCCATGGATAAGAGTTCC 1116
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1065 AACAAGTTGCCGGACAGATCGTGCTGGAATCATAGGTGCTGCCCCATGGATAAGAGTTCC 1124
Query 1117 GTGGCCTTTCCAGTGGGGTGCCCCATCGTTTGATGCTGGAGAAGCTTTTGCAATGATGAT 1176
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1125 ATGGCCTTTCCAGTGGGGTGCCCCATCGTTTGATGCTGGAGAAGCTTTTGCAATGATGAT 1184
Query 1177 GGCTTCTTTTGTTGCTCTAGTTGAGTCAACCGGTGCTTTTGTCGCTGTCTCGAGATACGC 1236
||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct 1185 GGCTTCTTTTGTTGCTCTAGTTGAGTCAACCGGTGCTTTTGTCGCGGTGTCAAGATACGC 1244
Query 1237 AAGTGCAACGATGTTGCCACCTTCTATCCTCAGCCGGGGTATAGGCTGGCAGGGAGTTGC 1296
||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct 1245 AAGTGCAACGATGTTGCCACCTTCTATTCTCAGCCGCGGTATTGGCTGGCAGGGAGTTGC 1304
Query 1297 GATTCTGATATCAGGGTTGTTTGGTACTGGAGCTGGTTCCTCTGTCTCTGTAGAAAATGC 1356
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1305 GATTCTGATATCAGGATTGTTTGGTACTGGTGCTGGTTCCTCTGTCTCTGTAGAAAATGC 1364
Query 1357 GGGATTATTGGCCTTGACACGAGTTGGTAGTCGAAGGGTTGTCCAGATAGCTGCAGGCTT 1416
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1365 CGGACTATTGGCCTTGACACGAGTTGGTAGTCGAAGGGTTGTCCAGATAGCTGCAGGCTT 1424
Query 1417 CATGATATTCTTCTCCATTCTCGGAAAATTCGGAGCTGTGTTTGCTTCAATTCCTGCACC 1476
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1425 CATGATATTCTTCTCTATTCTCGGAAAATTTGGAGCTGTGTTTGCTTCAATTCCTGCGCC 1484
Query 1477 CATCATTGCTGCTTTATACTGTCTCTTCTTCGCGTACGTGGGAGCTGGAGGTTTGAGTTT 1536
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1485 CATCATTGCTGCTTTATACTGTCTCTTCTTCGCATACGTGGGAGCTGGAGGTTTGAGTTT 1544
Query 1537 CCTTCAATTCTGCAACTTAAACAGCTTCAGGACCAAGTTCATCTTAGGTTTCTCTGTCTT 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1545 CCTTCAATTCTGCAACTTAAACAGCTTCAGGACCAAGTTCATCTTAGGTTTCTCTGTCTT 1604
Query 1597 CCTGGGCTTGTCCATCCCTCAATACTTCAATGAGTACACCGCAATCAAAGGATATGGTCC 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1605 CCTGGGCTTGTCCATCCCTCAATACTTCAATGAGTACACCGCAATCAAAGGATATGGTCC 1664
Query 1657 GGTCCACACTGGGGCTCGTTGGTTCAATGATATGGTGAATGTCCCGTTCTCCTCAGAGCC 1716
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1665 GGTCCACACTGGGGCTCGTTGGTTCAACGATATGGTAAATGTCCCGTTCTCCTCAGAGCC 1724
Query 1717 TTTTGTTGCTGGCAGCGTCGCTTTCTTCTTGGACAACACATTGCACAAGAAAGACTCTTC 1776
|||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 1725 TTTTGTTGCTGGAAGCGTCGCCTTCTTCTTGGACAACACACTGCACAAGAAAGACTCTTC 1784
Query 1777 GATAAGGAAAGACCGAGGGAAGCATTGGTGGGACAAGTTTAGATCTTTCAAAGGTGACAC 1836
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1785 GATAAGGAAAGACAGAGGGAAGCATTGGTGGGACAAGTTTAGATCTTTCAAAGGTGACAC 1844
Query 1837 AAGAAGTGAAGAATTCTACTCTCTTCCTTTCAATCTCAACAAGTATTTCCCATCTGTCTA 1896
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1845 AAGAAGTGAAGAATTCTACTCTCTACCTTTCAATCTCAACAAGTACTTCCCATCTGTCTA 1904
Query 1897 AAAGGGAAGAGAAGAGCAAAGA-GATAACCGGAAA-CAAA-A---TGGTGAAAA---G-- 1945
|||||||||||||||||||| | |||||| ||||| |||| | ||||||||| |
Sbjct 1905 AAAGGGAAGAGAAGAGCAAAAAAGATAACTGGAAAACAAAGAAAATGGTGAAAACTCGAG 1964
Query 1946 ---C-C--T------CT-G---T--GT--CGTGGTTCTTTTGTTCAGTTCCTT-CATAAC 1984
| | | || | | || |||||||| ||||||||||||||| || |||
Sbjct 1965 TTTCGCCATTGTTGACTTGGCCTCTGTGTCGTGGTTCGTTTGTTCAGTTCCTTTCACAAC 2024
Query 1985 TTTGGAAACTTAAAATATCTC-TCACATTCTATAGTCTTATTTACAAGAATGATGAATCT 2043
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2025 TTTGGAAACTTTAAATATCTCATCACATTCTATAGTCTTATTTACAAGAATGATGAATCT 2084
Query 2044 TCTTAA-GAGCATTGTTGTTTACTCTCTCTCTAATGCTTTTGTCTTTGTAAATCCGAGGG 2102
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2085 TCTTAAAGAGCATTGTTGTTTACTCTCTCTCTAATGCTTTTGTCTTTGTAAATCCGAGGG 2144
Query 2103 AACA----C--TACTTTTGTGATTTTGATTAGTTTCTAAACAAATCTTTAGCTTAATTTT 2156
|||| | |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2145 AACAGAAACACTACTTT-GTGATTTTGATTAGTTTCTAAACAAATCTTTAGCTTAATTTT 2203
> AT5G49990.1 | Symbols: | Xanthine/uracil permease family protein
| chr5:20337641-20341881 REVERSE LENGTH=1935
Length=1935
Score = 1051 bits (569), Expect = 0.0
Identities = 1270/1601 (79%), Gaps = 77/1601 (5%)
Strand=Plus/Plus
Query 338 CCACAACCACATCCTCCTAAAGATCAACTTCCCA-ACATTTCTTATTGCATCACCAGTCC 396
|||| ||||||||| || ||||| || ||| ||| | || ||||| ||||| || |||||
Sbjct 153 CCACTACCACATCCGCCGAAAGAACAGCTT-CCAGATATCTCTTACTGCATTACAAGTCC 211
Query 397 TCCTCCTTGGCCCGAAGCTATTCTTCTTGGATTTCAACATTACCTTGTGATGCTTGGGAC 456
|||||| ||||| || ||| |||| ||||| |||||||| ||||||||||||||||| ||
Sbjct 212 TCCTCCATGGCCTGAGGCTGTTCTGCTTGGGTTTCAACACTACCTTGTGATGCTTGGAAC 271
Query 457 AACAGTCCTCATACCTA-CTGCTCTTGTTCCCCAGATGGGAGGTGGATATGAAGAGAAGG 515
|||||| || || || | | ||||||||||| || ||||||||| || ||||||||||||
Sbjct 272 AACAGTTCTGATTCC-ATCGGCTCTTGTTCCACAAATGGGAGGTAGAAATGAAGAGAAGG 330
Query 516 CAAAGGTGATCCAGACTAT-TCTCTTTGTTGCTGGCA-TCAACACATTGCTCCAAACACT 573
||||| |||||||||| || | | ||||| ||||| | | |||||| |||||||||| |
Sbjct 331 CAAAGCTGATCCAGACAATAT-TGTTTGTAGCTGG-ATTGAACACACTGCTCCAAACTGT 388
Query 574 -TTTCGGGACTAGATTGCCTGCTGTTATTGGAGCATCCTACACATTCGTACCAACAACGA 632
||| || |||||||| |||||||||||||||||||| || ||||| || || || |
Sbjct 389 GTTT-GGAACTAGATTACCTGCTGTTATTGGAGCATCTTATACATTTGTCCCGGTTACTA 447
Query 633 TATCCATAATCCTCTCTGGCAGATTCAGTGATAC-CT-CAAACCCTA-TAGATCGCTTTG 689
| || || || || ||||| ||||||| || || | || | || | | || || |||
Sbjct 448 TCTCAATCATGCTTTCTGGGAGATTCAATG--ACGTTGCAGATCC-AGTTGAGCGATTTA 504
Query 690 AGAGGATAATGCGGGCAACCCAAGGCGC-CTTGATTGTTGCTTCTACCCTGCAGATGATT 748
|||||||||| |||||||||||||| || ||| ||||||||||| || || || || ||
Sbjct 505 AGAGGATAATTCGGGCAACCCAAGGTGCTCTT-ATTGTTGCTTCAACTCTTCAAATTATC 563
Query 749 CTTGGTTTCAGTGGTCTCTGGCGAAATGTTGTTAGGTTCTTAAGTCCTA-TTTCAGCTGT 807
||||| |||||||| || ||||| |||||||| |||||||||||||| | | || ||||
Sbjct 564 CTTGGCTTCAGTGGCCTTTGGCGTAATGTTGTAAGGTTCTTAAGTCC-ACTATCTGCTGC 622
Query 808 TCCACTGG-TGGGTCTCGTTGGTTTTGGGCTGTATGAGTTTGG-TTTCCCGGGGGTTGCT 865
||| ||| ||| | | ||||||| ||| ||||| ||||| || |||||| || ||||||
Sbjct 623 TCCTTTGGTTGGAT-TAGTTGGTTATGGCCTGTACGAGTTAGGTTTTCCC-GGTGTTGCT 680
Query 866 AAATGCATAGAGATTGGACTGCCTGAGCTTCTTATTCT-AGTATTCGTTTCACAGTACCT 924
|| || || |||||||||||||||| |||| ||||||| | || | | ||||||||| |
Sbjct 681 AAGTGTATTGAGATTGGACTGCCTGGGCTTATTATTCTCA-TACTAATATCACAGTACAT 739
Query 925 GCCTCATGTGATCAAATCAGGGAAAA-ATGTGTTTGAC-CGATTTGCTGTGATATTCGCG 982
||| ||||| || ||| | |||||| ||||||||| | || |||||||| ||||| |
Sbjct 740 GCCCCATGTTATAAAAGGA-GGAAAACATGTGTTTG-CTCGCTTTGCTGTCATATTTTCT 797
Query 983 GTGGTGATTGTGTGGATCTATGCTCATC-TTCTTACAGTTGGTGGGGCCTACAATGGTGC 1041
|||| ||| || ||| | |||||| || |||||||| ||||||| ||||| |||||||
Sbjct 798 GTGGCGATAGTATGGCTTTATGCT-TTCTTTCTTACACTTGGTGGTGCCTATAATGGTGT 856
Query 1042 T-GCACCA-ACTACACAAACAAGTTGTCGGACAGATCGTGCTGGAATCATAGGTGCTGCC 1099
| | | || | ||| |||| ||| |||||||| ||||| ||||| | ||| |||||||
Sbjct 857 TGGGA-CAGA-TACTCAAAGAAGCTGTCGGACTGATCGCGCTGGGCTTATAAGTGCTGCT 914
Query 1100 CCATGGATAAGAGTTCCGTGGCCTTTCCAGTGGGGTGCCCCATCGTTTGATGCTGGAGAA 1159
||||||||||||||||||||||||||||| ||||| || |||| |||||||||||| |||
Sbjct 915 CCATGGATAAGAGTTCCGTGGCCTTTCCAATGGGGAGCACCATTGTTTGATGCTGGTGAA 974
Query 1160 GCTTTTGCAATGATGATGGCTTCTTTTGTTGCTCTAGTTGAGTCAACCGGTGCTTTTGTC 1219
|| ||||| |||||||||||||||||||||||||| |||||||| || ||||||||| |
Sbjct 975 GCATTTGCCATGATGATGGCTTCTTTTGTTGCTCTTGTTGAGTCCACAGGTGCTTTTATT 1034
Query 1220 GCTGTCTCGAGATACGCAAGTGCAACGATGTTGCCACCTTCTATCCTCAGCCG-GGG-TA 1277
|| ||||| ||||| || ||||| || ||| |||||||||| | ||||||| ||| |
Sbjct 1035 GCCGTCTCAAGATATGCTAGTGCCACAATGCCGCCACCTTCTGTTATCAGCCGCGGGGT- 1093
Query 1278 TAGGCTGGCAGGGAGTTGCGATTCTGATATCAGGGTTGTTTGGTACTGG-AGCTGGTTCC 1336
| || |||||||||||||| ||| | || ||||||||||| || ||||| | ||| |
Sbjct 1094 T-GGTTGGCAGGGAGTTGCAATTTTAATCTCAGGGTTGTTCGGAACTGGTATAGGGT-CT 1151
Query 1337 TCTGTCTCTGTAGAAAATGCGGGAT-TATTGGC-CTTGACACGAGTTGGTAGTC-GAAGG 1393
|| || ||||| || |||||||| | | |||| || ||| | ||||||| | | ||
Sbjct 1152 TCAGTTTCTGTCGAGAATGCGGG-TCTGCTGGCACTA-ACAAAAATTGGTAG-CAGGAGA 1208
Query 1394 GTTGTCCAGATAGCTGCAGGCTTCATGATATTCTTCTCCATTCTCGGAAAATTCGGAGCT 1453
||||| || ||| |||||||||| |||||||||||||| ||||| || || ||||| ||
Sbjct 1209 GTTGTTCAAATATCTGCAGGCTTTATGATATTCTTCTCAATTCTTGGGAAGTTCGGGGCA 1268
Query 1454 GTGTTTGCTTCAATTCCTGCACCCATCATTGCTGCTTTATACTGTCTCTTCTTCGCGTAC 1513
|| ||||| || || ||| | || ||||| ||||| || |||||||||||||| |||||
Sbjct 1269 GTATTTGCATCCATACCTTCTCCTATCATAGCTGCCTTGTACTGTCTCTTCTTTGCGTAT 1328
Query 1514 GTGGGAGCTGGAGGTTTGAGTTTCCTTCAATTCTGCAACTTAAACAGCTTCAGGACCA-- 1571
|| || |||||||| ||||||| || |||||||||||| | || ||||||||||| |
Sbjct 1329 GTAGGTGCTGGAGGACTGAGTTTGCTGCAATTCTGCAACCTGAATAGCTTCAGGAC-ATT 1387
Query 1572 AGTTCAT-CTTAGGTTTCTCTGTCTTCCTGGGCTTGTCCATCCCTCAATACTTCAATGAG 1630
| ||||| || || ||||| ||||||| ||| | || || || ||||| ||||| |||
Sbjct 1388 A-TTCATACTG-GGCTTCTCAATCTTCCTAGGCCTATCAATTCCACAATATTTCAACGAG 1445
Query 1631 TACACCGCAATCAAAGGATATGGTCCGGTCCACACTGGGGCTCGTTGGTTCAATGATATG 1690
|||| || |||||||| |||||||| || || || ||||| | |||||||| || |||
Sbjct 1446 CACACAGCCATCAAAGGCTATGGTCCAGTTCATACCGGGGCAAGATGGTTCAACGACATG 1505
Query 1691 GTGAATGT-CCCGTTCTCCTC-AGAG-CCTTTTGTTGCTGGCA-GCGTCGCTTTCTTCTT 1746
|| ||||| ||| ||||| || | || ||||| || | || | | || |||| ||| ||
Sbjct 1506 GTCAATGTGCCC-TTCTCGTCCA-AGGCCTTT-GTGGGAGG-ATGTGTGGCTTACTTGTT 1561
Query 1747 GGACA--ACACATTGCACAAGAAAGACTC-TTCGATAAGGAAAGACCGAGGGAAGCATTG 1803
||||| || | || ||||||||||| | |||||| |||||||||||||| || || ||
Sbjct 1562 GGACACGACGC-TT-CACAAGAAAGA-TGGTTCGATCAGGAAAGACCGAGGTAAACACTG 1618
Query 1804 GTGGGACA-AGTT-TAGATCTTTCAA-AGGTGACACAAGAAGTGAAGAATTCTACT-CTC 1859
|||||||| | || | || ||||||| | ||| | |||| ||||| ||||| | |||
Sbjct 1619 GTGGGACAGA-TTCTGGA-CTTTCAAGAAC-GACCCGAGAACAGAAGAGTTCTA-TGCTC 1674
Query 1860 TTCCTTTCAATCTCAACAAGTATTTCCCATCTGTCT-AAAA 1899
|||| ||||| |||||||| |||||||| ||||||| ||||
Sbjct 1675 TTCCGTTCAACCTCAACAAATATTTCCCTTCTGTCTGAAAA 1715
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106927160850
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5