BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496545
Length=1494
Score E
Sequences producing significant alignments: (Bits) Value
AT5G63560.1 | Symbols: | HXXXD-type acyl-transferase family pr... 2338 0.0
AT3G48720.1 | Symbols: | HXXXD-type acyl-transferase family pr... 721 0.0
> AT5G63560.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr5:25449481-25451414 FORWARD LENGTH=1497
Length=1497
Score = 2338 bits (1266), Expect = 0.0
Identities = 1427/1503 (95%), Gaps = 18/1503 (1%)
Strand=Plus/Plus
Query 1 ATCTTTGGTTTTTCTTCGTTGACAAAACCCCTAAAAATGGCCGACTCATTCGAGCTCATC 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 1 ATCTTTGGTTTTTCTTCACTGACAAAACCCCTAAAAATGGCCGACTCATTCGAGCTAATT 60
Query 61 GTAACCCGAAAAGAACCTGTTCTCGTCTCTCCAGCCTCCGGAACTCCAAAAGGTCTCCAT 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 61 GTAACCCGAAAAGAACCTGTTCTCGTCTCTCCAGCCTCCGAAACTCCAAAAGGTCTCCAT 120
Query 121 TATCTATCAAATCTCGATCAAAACATCGCCATCATCGTCAAAACATTCTACTACTTCAAA 180
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 121 TATCTCTCAAATCTCGATCAAAACATCGCCATCATTGTCAAAACATTCTACTACTTCAAA 180
Query 181 TCAAACTCAAGATCCAACGAGGAATCCTGTGAAGTCATCAAGAAGTCACTCTCCGAGGTT 240
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 181 TCAAACTCAAGATCCAACGAAGAATCCTATGAAGTCATCAAGAAGTCACTCTCCGAGGTT 240
Query 241 CTTGTTCACTACTATCCTGCTGCCGGGAGACTCACGATCAGCCCCGAAGGCAAGATTGCT 300
|| ||||||||||||||||| || ||||||||||||||||| || ||||| ||||| |||
Sbjct 241 CTCGTTCACTACTATCCTGCCGCAGGGAGACTCACGATCAGTCCTGAAGGAAAGATCGCT 300
Query 301 GTGGATTGCACCGGAGAAGGAGTTGTCGTGGTGGAAGCTGAGGCCAATTGTGGGATAGAG 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 301 GTGGATTGCACCGGAGAAGGAGTTGTAGTGGTGGAAGCTGAGGCCAATTGTGGGATAGAG 360
Query 361 AAGATCAAGAAGGCTATATCGGAGATTGATCAACCGGAGACTCTTGAAAAGCTGGTTTTT 420
||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 361 AAGATAAAGAAGGCTATATCGGAGATTGATCAACCAGAGACTCTTGAAAAGTTGGTTTAC 420
Query 421 GACGTTCCCGGTGCTCGGAATATTCTTGAGATTCCGCCAGTGGTTGTTCAGGTGACAAAT 480
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 421 GACGTTCCCGGTGCTCGGAATATTCTCGAGATTCCTCCAGTGGTTGTTCAGGTGACAAAT 480
Query 481 TTCAAATGTGGAGGATTCGTGCTAGGACTAGGCATGAACCACAATATGTTCGATGGTATT 540
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 TTCAAGTGTGGAGGGTTCGTGCTAGGACTAGGCATGAACCACAATATGTTCGATGGTATC 540
Query 541 GCAGCTATGGAGTTCCTCAACTCTTGGGCCGAGACGGCTCGTGGCCTCCCTCTCTCCCTT 600
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 541 GCAGCCATGGAGTTCCTCAACTCTTGGGCCGAGACGGCTCGTGGCCTTCCTCTCTCCGTT 600
Query 601 CCACCTTTCTTGGACCGCACACTTCTACGACCACGAATCCCACCGAAGATCGAATTCCCA 660
|||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||
Sbjct 601 CCACCTTTCTTGGACCGCACACTTCTCCGACCACGAACCCCACCAAAGATCGAATTCCCA 660
Query 661 CACAACGAGTTTGAGGACCTCGAAGACATCTCCGGCACCGGAAAACTCTACTCCGACGAG 720
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CACAACGAGTTCGAGGACCTCGAAGACATCTCCGGCACCGGAAAACTCTACTCCGACGAG 720
Query 721 AAACTCGTCTACAAATCCTTCCTCTTCGGACCCGAAAAACTCGAGAGGCTCAAGATCATG 780
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 721 AAACTCGTCTACAAATCCTTCCTCTTCGGACCCGAAAAACTCGAGAGGCTTAAGATCATG 780
Query 781 GCAGAGACAA-AGTCCACGACTTTTCAAACCCTAACTGGATTTCTATGGAGAGCTCGTTG 839
|||||||| | | ||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct 781 GCAGAGACGAGA-TCCACGACTTTTCAAACCCTAACCGGGTTTCTGTGGAGAGCTCGTTG 839
Query 840 TCAAGCCTTAGGGCTTAAACCAGATCAACGGATCAAACTTCTCTTTGCTGCAGATGGACG 899
||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |
Sbjct 840 TCAAGCCTTAGGGCTTAAACCTGATCAACGGATCAAGCTTCTCTTTGCTGCAGATGGAAG 899
Query 900 GTCGAGATT--TTCCCCGGAACTTCCTAAAGGATATTCCGGTAACGGGATTGTGTTCACT 957
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 GTCGAGATTCGTTCC--GGAACTTCCTAAAGGATATTCCGGTAACGGGATTGTGTTCACT 957
Query 958 TATTGCGTTACAACGGCTGGTGAAGTGACTTTAAACCCTCTTTCTCATTCGGTGGGTTTG 1017
||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||
Sbjct 958 TATTGCGTTACAACGGCAGGTGAAGTGACTTTAAACCCTCTTTCTCATTCAGTGTGTTTG 1017
Query 1018 GTCAAAAGAGCCGTTGAAATGGTCAACGACGGTTTCATGAGGTCAGCGATTGATTACTTT 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 GTCAAAAGAGCCGTTGAAATGGTCAACGACGGTTTCATGAGGTCAGCGATTGATTACTTT 1077
Query 1078 GAGGTGACTCGAGCTAGGCCGAGTCTAACGGCAACACTTCTGATCACGTCGTGGGCAAAA 1137
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1078 GAGGTGACTCGAGCTAGGCCGAGCCTAACGGCAACACTTCTGATCACGTCGTGGGCAAAA 1137
Query 1138 CTGTCGTTTCATACTAAGGATTTCGGTTGGGGTGAACCGGTTGTGTCTGGACCGGTCGGT 1197
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1138 CTGTCGTTTCATACTAAGGATTTCGGTTGGGGTGAACCGGTTGTATCTGGACCGGTCGGT 1197
Query 1198 TTACCTGAGAAGGAAGTGATTCTGTTTCTGCCATGTGGCAGTGACACGAAGAGTATCAAT 1257
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1198 TTACCTGAGAAGGAAGTGATTCTGTTTCTGCCATGTGGTAGTGACACGAAGAGTATCAAT 1257
Query 1258 GTGCTGCTTGGACTTCCTGGCTCGGCTATGAAAGTGTTCCAAGGGCTTATGGATATATGA 1317
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1258 GTGCTGCTTGGACTTCCTGGCTCGGCTATGAAAGTGTTCCAAGGGATTATGGATATATGA 1317
Query 1318 ATGATTAAA-TTATTTATGGTTTA-TGTATGAATTTGAATTAAGTATGCTTTCAAAAGCA 1375
|| |||||| |||||||||||||| ||| ||||||| |||||| |||| ||| |||||||
Sbjct 1318 ATCATTAAAATTATTTATGGTTTAATGTTTGAATTTAAATTAACTATGATTTAAAAAGCA 1377
Query 1376 AATAATGACGAT----CAATTACGTGTTTGTGGTCGTATGTAATGTATTATTGCTCGTCG 1431
|||||||| ||| |||||||||||||||||||||||| || || |||| ||||||
Sbjct 1378 AATAATGATGATATATCAATTACGTGTTTGTGGTCGTATG-AA---AT-ATTGTTCGTCG 1432
Query 1432 GTGGAGCAAAAATGTAACTAAGATGTTAAAGTATCAAAGTTTAATAAAGAAAGGTATTGT 1491
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 1433 GTGGAGCAAAAATGTAACTAAGATGTTAAAGTATCAA-GTTTAATAAAGAAAGCTATTGT 1491
Query 1492 GTT 1494
|||
Sbjct 1492 GTT 1494
> AT3G48720.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr3:18046323-18049463 FORWARD LENGTH=1665
Length=1665
Score = 721 bits (390), Expect = 0.0
Identities = 1028/1328 (77%), Gaps = 76/1328 (6%)
Strand=Plus/Plus
Query 35 AAATGGCCGACTCATTC-GAGCTCATCGTAAC-CCGAAAAGAACCTGTTCTCGTCTCTCC 92
|||||| || |||| || ||| ||||||| || ||||| | |||| ||| || ||||
Sbjct 203 AAATGGTCGCCTCA-TCTGAGTTCATCGTCACAAGGAAAA-ACCCTGAACTCATCCCTCC 260
Query 93 AGCCTCCGGAACTCCAAAAGGTC-TCCATTATCTATCAAATCTCGATCAAAACATCGCCA 151
| |||| |||||| || |||| | | ||||| || ||||||||||||||||||||||
Sbjct 261 CGTGTCCGAAACTCCGAATGGTCAT-TACTATCTCTCGAATCTCGATCAAAACATCGCCA 319
Query 152 TCATCGTCAAAACATTCTACTACTTCAAATCAAACTCAAGATCCAACGAGGAATCCTGTG 211
||||||| |||||||| || |||| |||||| | |||||| ||||| | |||||||
Sbjct 320 TCATCGTGAAAACATTATATTACTACAAATCGGAGTCAAGAACCAACCAAGAATCCTAC- 378
Query 212 AA-GTCATCAAGAAGTCACTCTCCGAGGTTCTTGTTCACTACTATCCTG-CTGCCGGGAG 269
|| || |||||||| || ||||| |||||||||||||| ||||| |||| | ||||| ||
Sbjct 379 AATGTGATCAAGAAATCTCTCTCAGAGGTTCTTGTTCATTACTACCCTGTC-GCCGGAAG 437
Query 270 ACTCACGATCAGCCCCGAAGGCAAGATTGCTGTGGATTGCACCGGAGAAGGAGTTGTCGT 329
|| |||||||| || ||||| ||||| || || |||||||||||||||| || || ||
Sbjct 438 GCTGACGATCAGTCCGGAAGGGAAGATCGCCGTCAATTGCACCGGAGAAGGTGTAGTGGT 497
Query 330 GGTGGAAGCTGAGGCCAATTGTGGGATAGAGAAGATCAA-GAAGGCTATATCGGAGATTG 388
|||||||||||||| || ||||||||||| | |||||| || ||| || || |||| |
Sbjct 498 TGTGGAAGCTGAGGCTAACTGTGGGATAGATACGATCAAAGA-GGCCATCTCAGAGAAT- 555
Query 389 ATCAACCGGAGACTCTTGA-AAAGCTGGTTTTTGACGTTCCCGGTGCTCGGAATATTCTT 447
| || |||||| || || ||| || |||| |||||||| ||||| ||||||||||||
Sbjct 556 AG-AAT-GGAGACGCTCGAGAAA-CTTGTTTACGACGTTCCAGGTGCCCGGAATATTCTT 612
Query 448 GAGATTCCGCCAGTGGTTGTTCAGGTGACAAATTTCAAATGTGGAGGATTCGTGCTAGGA 507
|||||||| || || || |||||||||||||||||||||||||| || || || ||||||
Sbjct 613 GAGATTCCACCGGTAGTAGTTCAGGTGACAAATTTCAAATGTGGGGGTTTTGTCCTAGGA 672
Query 508 CTAGGCATGAACCACAATATGTTCGATGGTATT-GCAGCTATGGAGTTCCTCAACTCTTG 566
|||||||||| |||||| ||||||||||| | | || ||| ||||||||||||||| ||
Sbjct 673 CTAGGCATGAGCCACAACATGTTCGATGG-AGTCGCCGCTGCGGAGTTCCTCAACTCGTG 731
Query 567 G-GCCGAGACGGCTCGTGGC-CTCCCTCTCTCCCTTCCACCTTTCTTGGACCGCAC-ACT 623
| || |||| ||| | || || ||| | ||| | ||||| ||||||||||| || | |
Sbjct 732 GTGC-GAGATGGC-CAAGGGTCTTCCTTTATCCGTCCCACCATTCTTGGACCGTACGA-T 788
Query 624 TCTACGACCACGAATCCCACCGAAGATCGAATTCCCACACAACGAGTTTGAGGACCTCGA 683
||| || |||||| ||| || || ||||| ||||||||||| || || || || | ||
Sbjct 789 TCTCCGGTCACGAAACCCTCCCAAAATCGAGTTCCCACACAATGAATTCGACGAAATTGA 848
Query 684 AGACATCTCCGGCACCGGAAAACTCTACTCCGACGAGAAACTCGTCTACAAATCCTTCCT 743
||| || |||| |||||||||| ||||| || || |||||| |||||||||| || ||
Sbjct 849 AGATATTTCCGACACCGGAAAAATCTACGATGAAGAAAAACTCATCTACAAATCATTTCT 908
Query 744 CTTCGGACCCGAAAAACTCGAGAGGCTCAAGATCATGGC-A--GA-GA------CAA-AG 792
|||| ||||||||| || |||| ||||||||||||||| | || || ||| |
Sbjct 909 TTTCGAACCCGAAAAGCTTGAGAAGCTCAAGATCATGGCGATTGAAGAAAATAACAATAA 968
Query 793 TCC---A-CGACTTTTCAAACCCTAACTGGATTTCTATGGAGAGCTCGTTGTC-AAGC-C 846
| | | || |||||| || |||| || ||||| |||| | | | || | |||| |
Sbjct 969 TAAGGTATCAACATTTCAAGCCTTAACCGGGTTTCTTTGGAAATCAAGATG-CGAAGCTC 1027
Query 847 TTAGGGCTTAAACCAGATCAACGGATCAAACTTCTCTTTGCTGCAGATGGACGGTCGAGA 906
| | || ||||||| || |||||| | || ||||| ||||| || ||||||||||| |||
Sbjct 1028 T-ACGGTTTAAACCGGACCAACGGGTTAAGCTTCTGTTTGCGGCGGATGGACGGTCAAGA 1086
Query 907 TTT-TCCC-CGGAACTTCCTAAAGGATATTCCGGTAACGGGATTGTGTTCACTTATT-GC 963
|| |||| || || || ||||||||| ||| |||||||||||||| || || |
Sbjct 1087 TTCATCCCACGT--CTCCCGCAAGGATATTGCGGGAACGGGATTGTGTTAACCGGTTTG- 1143
Query 964 GTTACAACGGCTGGTGAAGTGACTTTA-AACCCTCTTTCTCATTCGGTGGGTTTGGTCAA 1022
|| ||| | | || ||| | | || |||||||||||||| |||||||||||||||||
Sbjct 1144 GTGACATCATCGGGAGAATT-AGTTGGGAACCCTCTTTCTCACTCGGTGGGTTTGGTCAA 1202
Query 1023 AAGAGCCGTTGAAA-TGGTCAACG-ACGGTTTCATGAGGTCAGCGATTGATTACTTTGAG 1080
||| | | || | |||| | || |||| |||||| |||| || || || ||||| |||
Sbjct 1203 GAGA-CTGGTGGAGCTGGTTA-CGGACGGCTTCATGCGGTCGGCTATGGACTACTTCGAG 1260
Query 1081 GTGA-CTCG-AGCTA-GGCCGAGTCT-AACGGCAACACTTCTGATCACGTCGTGGGCAAA 1136
|||| | || | | | |||||||| | |||| | |||||| |||| || || ||| ||||
Sbjct 1261 GTGAAC-CGGA-C-ACGGCCGAGTATGAACG-CGACACTTTTGATTACATCCTGGTCAAA 1316
Query 1137 ACTGTCGTTTCATA--CTAAGGATTTCGGTTGGGGTGAACCGGTTGTGTCTGGACCGGTC 1194
| || | || |||| || ||||||||||||||| ||||||||| | |||||||||||
Sbjct 1317 ATTGACATTGCATAAACT--GGATTTCGGTTGGGGAGAACCGGTTTTCTCTGGACCGGTT 1374
Query 1195 GGTTTACCTGAGAAGGAAGTGATTCT-GTTTCTG-CCATGTGGC-AGTGACACGAAGAGT 1251
|||||||| | || ||||||||| || ||| || ||| |||| | ||| | |||||||
Sbjct 1375 GGTTTACCAGGGAGGGAAGTGAT-CTTGTT-CTTACCAAGTGGTGA-TGATATGAAGAGT 1431
Query 1252 ATCAATGTGCTGCTTGGACTTCCTGGCT-CGGCTATGAAAGTGTTCCAAGGGCTTATGGA 1310
||||||||| | ||||| |||||| || | |||||| ||||||| ||| ||||||| |
Sbjct 1432 ATCAATGTGTTTCTTGGCCTTCCTA-CTTCAGCTATGGAAGTGTTTGAAGAGCTTATGAA 1490
Query 1311 TATATGAA 1318
|| ||||
Sbjct 1491 GATCTGAA 1498
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73694400060
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5