BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496554 Length=1877 Score E Sequences producing significant alignments: (Bits) Value AT5G63640.1 | Symbols: | ENTH/VHS/GAT family protein | chr5:25... 2796 0.0 > AT5G63640.1 | Symbols: | ENTH/VHS/GAT family protein | chr5:25477678-25481489 FORWARD LENGTH=1925 Length=1925 Score = 2796 bits (1514), Expect = 0.0 Identities = 1713/1806 (95%), Gaps = 26/1806 (1%) Strand=Plus/Plus Query 94 tctgtcttcttcttctccttcttc-ttcACGTATCTGTGAAATGCTCAAGCTGATTAGGG 152 ||| |||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| Sbjct 124 TCT-TCTTCTTCTTCTTCTTCTTCGTTTACGTCTCTGTGAAATGCTCAAGCTGATTAGGG 182 Query 153 TTTATCAACTCTTTCTTAACTTTCTTATTAT-TGCCTTCGTTATCCTCTCCGTCTTCTCA 211 |||||||||| ||||| ||||||||| |||| | |||||||||||||||| ||||||||| Sbjct 183 TTTATCAACTTTTTCTCAACTTTCTTGTTATCT-CCTTCGTTATCCTCTCTGTCTTCTCA 241 Query 212 GCTTTGTAGCTATTGTGTATTCGAATCTGTACGCGGAAGGAAAGCCCATAGAACAGTCAA 271 |||| | |||||||||| ||| ||| |||||| |||||| ||||||||||||| |||||| Sbjct 242 GCTTAGCAGCTATTGTGCATTTGAAGCTGTACTCGGAAGAAAAGCCCATAGAAGAGTCAA 301 Query 272 ATATAACAAAATATGGCTGCGGAGCTTGTAAGTTCTGCAACAAGTGAGAAGCTTGCTGAT 331 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 302 ATATAACAAAAAATGGCTGCGGAGCTTGTAAGTTCTGCAACAAGTGAGAAGCTTGCAGAT 361 Query 332 GTGGACTGGACCAAAAACATTGAGATCTGTGAATTAGCTGCTCGAGATGAAAGGCAAGCA 391 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 362 GTGGACTGGGCCAAAAACATTGAGATCTGTGAATTAGCTGCTCGAGATGAAAGGCAAGCA 421 Query 392 AAAGATGTTATCAAGGCTATCAAAAAACGCTTGGGAAGCAAGAACCCAAATACTCAATTA 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 422 AAAGATGTTATCAAGGCTATCAAAAAACGCTTGGGAAGCAAGAACCCAAATACTCAATTA 481 Query 452 TATGCTGTCCAGTTGCTGGAGATGTTGATGAATAATATTGGAGAGAATATTCATAAGCAG 511 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 482 TATGCTGTCCAGTTGCTAGAGATGTTGATGAATAATATTGGAGAGAATATTCATAAGCAA 541 Query 512 GTTATAGATACAGGTGTACTCCCTACACTTGTGAAGATAGTAAAGAAAAAATCGGATTTG 571 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 542 GTTATAGATACAGGTGTACTCCCTACGCTTGTGAAGATAGTAAAGAAAAAATCGGATTTG 601 Query 572 CCTGTAAGAGAGAGGATTTTTCTTCTTCTTGATGCAACTCAAACCTCCCTTGGTGGCGCT 631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 602 CCTGTAAGAGAGAGGATTTTTCTTCTTCTTGATGCAACTCAAACCTCCCTTGGTGGCGCT 661 Query 632 TCAGGGAAATTCCCTCAGTATTATACAGCATACTATGATTTAGTGCACGCAGGAGTTAAA 691 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct 662 TCAGGGAAATTCCCTCAGTATTATACAGCATACTATGAATTAGTGAACGCAGGAGTTAAA 721 Query 692 TTTACCCAGAGACCTAATGCTACACCAGTTGTGGTCACTGCTGAAGCTGTTCCGAGAAAT 751 ||||| ||||| ||||||||||||||||| |||||||||||| | ||||||||||||||| Sbjct 722 TTTACTCAGAGGCCTAATGCTACACCAGTCGTGGTCACTGCTCAGGCTGTTCCGAGAAAT 781 Query 752 ACGCTCAATGAACAACTTGCATCTGCTAGAAATGAAGGGCCTGCTACTACTCAGCAGCGA 811 || || |||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 782 ACCCTTAATGAACAACTTGCATCTGCCAGAAATGAGGGGCCTGCTACTACTCAGCAGCGA 841 Query 812 GAATCTCAAACTGTCTCTCCTTCGAGCATTTTACAAAAGGCTAGTACCGCATTAGAAGTT 871 ||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||| || Sbjct 842 GAATCTCAATCTGTCTCTCCTTCGAGTATTTTACAAAAGGCTAGTACTGCATTAGAAATT 901 Query 872 TTAAAGGAAGTGCTTGACGCAGTCGATTCTCAAAATCCTGAGGGGGCAAAAGATGAGTTT 931 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 902 TTGAAGGAAGTGCTTGACGCAGTCGATTCTCAAAATCCTGAGGGGGCAAAAGATGAGTTT 961 Query 932 ACTCTTGATCTTGTCGAGCAATGTTCGTTTCAGAAAGAGCGCGTAATGCACCTCGTCATG 991 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 962 ACTCTTGATCTTGTCGAGCAATGTTCGTTTCAGAAAGAGCGCGTAATGCACCTCGTCATG 1021 Query 992 ACATCGAGGGATGAAAAAGCAGTTTCTAAAGCAATTGAATTGAATGAGCAACTTCAGAGA 1051 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1022 ACATCGAGGGATGAAAAAGCAGTTTCTAAAGCAATCGAATTGAATGAGCAACTTCAGAGA 1081 Query 1052 ATTCTCAATAGACATGAAGATTTGCTGTCTGGCAGAATCACAGTTCCTAGCAGGTCTACT 1111 |||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 1082 ATTCTCAATAGACACGAAGATTTGCTGTCTGGTAGAATCACTGTTCCTAGCAGGTCTACC 1141 Query 1112 ACATCCAATGGATATCATTCCAATCTCGAACCTATCCGTCCTATCTCAAACGGTCACAAT 1171 ||||| ||||||||||||||||||||||||||| |||||||||||||||| ||| || | Sbjct 1142 ACATCAAATGGATATCATTCCAATCTCGAACCTGTCCGTCCTATCTCAAATGGTGACCAG 1201 Query 1172 AAA-GCCGAGCTAAAGGCTTCTAATGCAAATACCGAATCAAGCAGCTCCATTTCTAACCG 1230 ||| || ||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 1202 AAACGC-GAGCTAAAGGCTTCTAATGCAAACACCGAATCAAGCAGCTTCATTTCTAACCG 1260 Query 1231 AGCCCATCTTAAGCTTGAGGAAGAAGATGAGGAAGAGGAGCCTGAGCAGTTATTCAGAAG 1290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1261 AGCCCATCTTAAGCTTGAGGAAGAAGATGAGGAAGAGGAGCCTGAGCAGTTATTCAGAAG 1320 Query 1291 ATTGCGAAAAGGGAAAGCTAGAGCAAGGCCTGAGGATGAAGAAGAGCCATCACCTCCACA 1350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1321 ATTGCGAAAAGGGAAAGCTAGAGCAAGGCCTGAGGATGAAGAAGAGCCATCACCTCCACA 1380 Query 1351 AGGCTTACCTGGATCAGCAATCCATAACGAAAGACTTAACCGTCCACTTATTCGTCCTTT 1410 ||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 1381 AGGATTGCCTGGATCAGCAATACATAACGAAAGACTTAACCGTCCACTTATCCGTCCTTT 1440 Query 1411 ACCATCAGAGGAGGCATCACGCGGTGGTGATAGCCATTCGCAATCCCCACCTGTTGTGAT 1470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1441 ACCATCAGAGGAGGCATCACGCGGTGGTGATAGCCATTCGCAATCCCCACCTGTTGTGAT 1500 Query 1471 TCCACCACCACCTGCGAAACACGTTGAGAGGGAAAAATTCTTCAAGGAGAAGAAAGTTGA 1530 |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||| Sbjct 1501 TCCACCACCACCTGCGAAGCACGTTGAGAGGGAAAAATTCTTCAAGGAGAATAAAGGTGA 1560 Query 1531 CGGTGCCTCAGGTTTACCAGGTCATATGAGAGGCCTTTCTTTGCATAGCCGCGATGGCAG 1590 |||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct 1561 CGGTGCCTTGGGTTTACCAGGTCATATGCGAGGCCTTTCTTTGCATAGCCGTGATGGCAG 1620 Query 1591 CAGCTCACGCAGTGGAAGCGTAGACTTCAGTGACTGAAACAAACCAAAGCTCTCATCATC 1650 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1621 CAGCTCACGCAGTGGAAGCGTAGACTTCAGTGACTGAAACAA-CCAAAGCTCTCATCATC 1679 Query 1651 ATATATATGTATTCTTTCACGCTCGTTTCTTTAGGTTTTGGTAATTTACAGATGG-AAAA 1709 ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||| Sbjct 1680 ATATATATGTATTCTTTCACGCTTGTTTCTTTAGGTTTTGTTAATTTACAGATGGGAAAA 1739 Query 1710 AGTTTGTGTTGTGTGT-GCTG------ctctatctctctc-c-ct--ctctctc-t-ct- 1755 |||||||||||||||| |||| |||| |||||||| | || ||||||| | || Sbjct 1740 AGTTTGTGTTGTGTGTTGCTGTTATTTCTCTCTCTCTCTCTCTCTTTCTCTCTCCTTCTA 1799 Query 1756 c-tct--AGTGTTGTGAATTTAGAATATAGCACCATGAGATCTGGTTATGTATACGAGTA 1812 | ||| ||||||||||||||||||| |||||| |||||||||| ||||||||||||||| Sbjct 1800 CGTCTCTAGTGTTGTGAATTTAGAATGTAGCACGATGAGATCTGATTATGTATACGAGTA 1859 Query 1813 AA-GGTACTTCCTTTCACTATGTTCAAACCTGAGCTATGTTATTTACAGAGGTTGTTGTT 1871 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1860 AAAGGTACTTCCTTTCACTATGTTCAAACCTGAGCTATGTTATTTACAGAGGTTGTTGTT 1919 Query 1872 ACTGTT 1877 |||||| Sbjct 1920 ACTGTT 1925 Score = 196 bits (106), Expect = 5e-49 Identities = 117/122 (96%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 1 AATCTGATTTTAAGGAATTAA--TCTATTTGCCAAAGAAGAGGCGCAAAGGCTCCGTCct 58 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 1 AATCTGATTTTAAGGAATTAATCTCTATTTGCCAAAGAAGAGGCGCAAAGGCTCCGTCTT 60 Query 59 ttttcttctccttgtttctgtgttaccgatctggctctgtcttcttcttctccttcttct 118 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 61 TTTTCTTCTTCTTGTTTCTGTGTTACCGATCTGGCTCTGTCTTCTTCTTCTTCTTCTTCT 120 Query 119 tc 120 || Sbjct 121 TC 122 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 92921208795 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5