BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496581
Length=1668
Score E
Sequences producing significant alignments: (Bits) Value
AT5G63900.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/... 2355 0.0
> AT5G63900.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type
zinc finger domain | chr5:25568698-25570371
FORWARD LENGTH=1674
Length=1674
Score = 2355 bits (1275), Expect = 0.0
Identities = 1548/1678 (92%), Gaps = 26/1678 (2%)
Strand=Plus/Plus
Query 7 TCGTGTAATATTGTTCAGATGGAAGCGGAGCTAAGTCCAGGAGCCATCGAACAGTGGATT 66
|||||| ||||||||| ||||||||| |||||||||||||||||||||||| ||||| ||
Sbjct 7 TCGTGTGATATTGTTCCGATGGAAGCAGAGCTAAGTCCAGGAGCCATCGAAGAGTGGCTT 66
Query 67 TCGACGGTAAAGAATGGAAAGATGATC-GAGAAAGGAAAACGACGATCGGATTTGGCGAT 125
|||||||||||| |||||||||||| | ||||| ||||||||||||||||||||| | ||
Sbjct 67 TCGACGGTAAAGCATGGAAAGATGA-CGGAGAACGGAAAACGACGATCGGATTTGTCCAT 125
Query 126 CAAGGTGAGGAGACATCTCTCGGCTCTTGGTTGGGTAATCTCTTACTTTAACAAAGGGAA 185
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 126 CAAGGTGAAGAGACATCTCTCGGCTCTTGGTTGGGTAATCTCTTACTATAACAAAAGGAA 185
Query 186 CAAGCGAGAGCTGCGTTATAAGTCTCCCAAGGGAAGGTGGTTTTACTCTTTAGCTAAGGC 245
|||| ||||| ||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct 186 CAAGAAAGAGCAGCGTTATAAGTCTCCCAAGGGAAAGTGGTTCTACTCTTTAGCTAAGGC 245
Query 246 TTGTATGAGTTGTGTCGACCAAGACTCTCAACAACAACAACAAATTGTTCCTAAATATGA 305
||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||
Sbjct 246 TTGTATGAGTTGTGTCGACCAAGACTCTCAACAGCAACTACAAATTGTTCCCAAATATGA 305
Query 306 CTTGTCTTG-CTCTCCAAG-AA-ATCTGTCCTCGGAATCTAGTTTTGTTGGATCGAATCA 362
||||||||| || |||||| || || || |||| || ||||||| || || ||||||||
Sbjct 306 CTTGTCTTGCCT-TCCAAGCAATAT-TG-CCTCAGAGTCTAGTTCTGATGTTTCGAATCA 362
Query 363 AAAACAGAAGAAGAGTAAGAAAAGGAGTAGGGTTGAGGATTTGGATATCAATAGCACAGC 422
|||||||||||| |||||||||||| ||||||| |||||||||||| |||| ||||||||
Sbjct 363 AAAACAGAAGAAAAGTAAGAAAAGGGGTAGGGTCGAGGATTTGGATGTCAAAAGCACAGC 422
Query 423 TCCGGAAAAAGAGAGTCAT--GCCT-CTGATTTTATCAAAATCGTTCCAAATTTTGATGT 479
|||||||||||| | |||| | || ||||||| ||||||||||||||||||||||||||
Sbjct 423 TCCGGAAAAAGATAATCATCCGTCTGCTGATTTGATCAAAATCGTTCCAAATTTTGATGT 482
Query 480 ATTGAAACAACAAC-A-TG-AGAAGCT-AT--TGAATAGAGTGGAGGATTGTGATACGGC 533
| |||||||||| | | ||||| | || |||||||| |||| || |||||||||
Sbjct 483 AGCAAAACAACAACAACAGAAGAAGATAATAATGAATAGA---GAGGGTTCTGATACGGC 539
Query 534 TGCGTTTAATGGGGACCAAGAGAAGATCAAAATCATTCTCAACGTTGATGTAATACATGA 593
|| |||||||||||||||||||||||||| |||| |||||| |||||||||||||||||
Sbjct 540 TGTGTTTAATGGGGACCAAGAGAAGATCAGAATCGGTCTCAATGTTGATGTAATACATGA 599
Query 594 GCAACAAAAGAAGAGAAGGAAGACGGCGGGTGAAGAGATAAGGAGGCC-AAGAATAGAGA 652
|||||| |||||||||||||||| |||| ||||||||||||||||||| ||| || | ||
Sbjct 600 GCAACAGAAGAAGAGAAGGAAGATGGCGAGTGAAGAGATAAGGAGGCCGAAG-ATGGTGA 658
Query 653 AATCGCTGAAGAAGGTCTTACAAGTGATGGAAAAGAAGCAGCAGAAGAACAAGCATGAAA 712
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 AATCTCTGAAGAAGGTATTACAAGTGATGGAAAAGAAGCAGCAGAAGAACAAGCATGAAA 718
Query 713 AAGAGTCTCTAAGATTCTGTAGAAAAGATTCTAGTCCGGACATGAACTGTGATGTGTGCT 772
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 719 AAGAGTCTCTAAGATTCTGTAGAAAAGATTGTAGTCCGGACATGAACTGTGATGTGTGTT 778
Query 773 GTGTTTGTCACTGGGGTGGAGATTTGCTTCTATGTGATGGTTGTCCTTCAGCTTTTCACC 832
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 779 GTGTTTGTCACTGGGGTGGAGATTTGCTTCTTTGTGATGGTTGTCCTTCAGCGTTTCACC 838
Query 833 ATACTTGCCTCGGTTTGTCGAGTCTTCCCGAGGAAGATCTCTGGTTCTGTCCTTGTTGCT 892
|| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 839 ATGCTTGCCTCGGTTTGTCTAGTCTTCCCGAGGAAGACCTCTGGTTCTGTCCTTGTTGCT 898
Query 893 GCTGTGATATATGTGGATCAATGGAATCACCCGTAAACAGCAAGTTGATGGCATGTGAGC 952
|||| ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 899 GCTGCGATATCTGTGGATCAATGGAATCACCCGCGAACAGCAAGTTGATGGCTTGTGAGC 958
Query 953 AGTGCCAAAGAAGATTCCATCTCAAGTGTTTGAAAGAAGAGC-CTGGTATCGTTTCCTGT 1011
||||||| ||||| |||||||||| ||||||||||||||| | || | || ||||| ||
Sbjct 959 AGTGCCAGAGAAGGTTCCATCTCACGTGTTTGAAAGAAGA-CTCTTGCATTGTTTCGAGT 1017
Query 1012 AGAGGCTGGTTCTGTAGTAGTCAATGCAATAGAGTCTCTTCCGCCCTTGAGAATCTCATA 1071
||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||
Sbjct 1018 AGAGGCTGGTTCTGTAGTAGTCAATGCAACAGAGTCTTTTCCGCGCTTGAGAATCTCCTA 1077
Query 1072 GGATGTAAGATTGCAGTAGGCAACAACGGTGATTTGGTCTGGACGTTGATGAGAGCTCCG 1131
||| |||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 1078 GGAAGTAAAATTGCAGTAGGCAACGACGGTGATTTGGTCTGGACATTGATGAGAGCTCCG 1137
Query 1132 AACGAAGGTGAACACTATGATGATGAACAAATCTCCAAGCTAGAATCTGCTGTTGAGATA 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1138 AACGAAGGTGAACACTATGATGATGAACAAATCTCCAAGCTAGAATCTGCTGTCGAGATA 1197
Query 1192 TTTCACCAAGGGTTTGAGCCTACCAAAGATGTTTTCTCTGGGAGAGACCTTGTTGAGGAA 1251
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1198 CTTCACCAAGGGTTTGAGCCTACCAATGATGTTTTCTCTGGGAGAGACCTTGTTGAGGAA 1257
Query 1252 CTGATATTCAGGAAAGACAGAACTGGAGTGGGCCGCGGATTTTACACAGTCTTGATCGAG 1311
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1258 CTGATATACAGGAAAGACAGAACTGGAGTGGGCCGCGGGTTTTACACAGTCTTGATCGAG 1317
Query 1312 AGAAAGAAGGAGCCTATTACGGTGGCTGCAGTGAGAGTTGACAAAGATGTAGTCGAGATC 1371
|||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 1318 AGAAAGAACGAGCCTATCACGGTGGCAGCAGTGAGAGTTGACAAAGATGTAGTCGAGATC 1377
Query 1372 CCTTTGGTGGCGACATTGTCTAACTACAGGAGAAGTGGGATGTGCAGAGTGTTGATGGAT 1431
|||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||
Sbjct 1378 CCTTTGGTGGCGACATTGTCTAGTTACAGAAGAAGTGGGATGTGCAGAGTGCTGATGGAT 1437
Query 1432 GAGTTGGAGAAGCAAATGTCTCAGATGGGAGTTTGTAGACTGGTCTTACCGGCTGCAAAA 1491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 GAGTTGGAGAAGCAAATGTCTCAGATGGGAGTTTGTAGACTGGTCTTACCGGCTGCAAAA 1497
Query 1492 GAGGTTGTGAGCACTTGGACACAGCGGTTTGGGTTCTCGGTAATGGAA-AGTTCCGAGCG 1550
|||||||||| ||||||||| |||||||||||||||| |||||| || ||||| |||||
Sbjct 1498 GAGGTTGTGACCACTTGGACTGAGCGGTTTGGGTTCTCTGTAATG-AACAGTTCGGAGCG 1556
Query 1551 GCTGGAGCTTGTGAAACATGGAATGCTTGATTTTGTAGGTACCGTCATGTGCCATAAGTT 1610
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 1557 GCTGGAGCTTGTGAAACATGGAATGCTTGATTTTGTTGGTACCATCATGTGCCATAAGTT 1616
Query 1611 TCTTGTGAAGGAAAGAGCAGAAAATGATTCTGCAGAAGAGTCAAGCCTCACAGAATAA 1668
|||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1617 TCTTCAGAAGGAAAGAGCAGAAAATGATTCTGCAGAAGAGTCAAGTCTCACAGAATAA 1674
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82429294890
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5