BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496594
Length=1209
Score E
Sequences producing significant alignments: (Bits) Value
AT5G64000.1 | Symbols: SAL2, ATSAL2 | Inositol monophosphatase ... 1901 0.0
AT5G09290.1 | Symbols: | Inositol monophosphatase family prote... 326 4e-88
> AT5G64000.1 | Symbols: SAL2, ATSAL2 | Inositol monophosphatase
family protein | chr5:25616638-25618631 FORWARD LENGTH=1223
Length=1223
Score = 1901 bits (1029), Expect = 0.0
Identities = 1150/1210 (95%), Gaps = 2/1210 (0%)
Strand=Plus/Plus
Query 1 TTGAAGCTTTTCAATGTCTTATGAGAAGGAGCTAGCCGCTGCAAAGAAAGCTGTCTCTCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 14 TTGAAGCTTTTCAATGTCTTATGAGAAGGAGCTAGCCGCTGCAAAGAAAGCCGTCACTCT 73
Query 61 AGCTGCTCGTCTCAGCCAGGAAGTTCAGAAGACTCTGTTGCAATCCCAAGTATGGAAAAA 120
|||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 74 AGCTGCTCGTCTCAGCCAGGAAGTGCAGAAGACTCTTTTGCAATCCCAAGTTTGGAAAAA 133
Query 121 ATCCGATAGAAGTCCAGTTACTGCAGCTGATTACGGCTCACAAGCTGTAGTTAGTCTTGT 180
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 134 ATCCGATAGAAGTCCGGTTACTGCAGCTGATTACGGCTCACAAGCTGTGGTTAGTCTTGT 193
Query 181 ATTGGAGAGGGAGCTCCAACCTGATAAACTGTCATTAGTAGCCGAAGAGGAAACTGGAGA 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 194 ATTGGAGAGGGAGCTCCAACCTGATAAACTGTCATTAGTAGCTGAAGAGGAAACTGGAGA 253
Query 241 TCTGCGGAAAAAGGGAAGTGAGTTGTTTCTACAAGGTATTACAACA-CTTGTGAAAGATA 299
||||||||| || ||||||||| ||||||| ||| |||| ||| | |||||||||||||
Sbjct 254 TCTGCGGAAGAATGGAAGTGAGGCGTTTCTAGAAGATATTGCAA-AGCTTGTGAAAGATA 312
Query 300 CTCTAGCTTCTGAGGAATCGTACACCGGCTCTCCTCTATCCACAGATGATGTGTTAAATG 359
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 313 CTCTAGCCTCTGAGGAATCGTACACCAGCTCTCCTCTATCCACAGATGATGTGTTAAATG 372
Query 360 CTATAGACTGCGGTAAATCAGAAGGCGGTAGCAGCGGTTCCCACTGGGTTCTTGACCCTA 419
||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||
Sbjct 373 CTATAGACTGCGGTAAATCAGAAGGCGGTTGCAAAGGTTCCCACTGGGTTCTTGATCCTA 432
Query 420 TAGATGGAACCAGAGGATTTGTAAGAGGAGAGCAATATGCTGTGGGACTAGCGTTGCTTG 479
||||||||||||||||||||||||||||||||||||| || ||||| |||| |||||||
Sbjct 433 TAGATGGAACCAGAGGATTTGTAAGAGGAGAGCAATACGCGGTGGGGTTAGCCTTGCTTG 492
Query 480 TGGAAGGCAAAGTGGTGCTTGGTGTCATGGCTTGCCCGAATCTTCCTTTGGCTTCAGCGA 539
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 493 TGGAAGGCAAAGTGGTGCTTGGTGTCATGGCTTGCCCAAATCTTCCTTTGGCTTCTGCGG 552
Query 540 TTTGCGTGACGGATAAGTCTTCCCAGGAAGGTGTTGGCTGTCTTTTCTTTGCTACAACGG 599
|||||| ||| ||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 553 TTTGCGCGACTGATAATTCTTCCCAGGAAGATGTTGGCTGTCTTTTCTTTGCTACAACGG 612
Query 600 GTTCAGGAACTTATGTGCAATCACTCAAAGGCAATTCTCTACCACAGAAGGTGCGAGTGA 659
||||||| ||||| |||||||| ||||||||||||||||| ||||| ||||||| |||||
Sbjct 613 GTTCAGGGACTTACGTGCAATCGCTCAAAGGCAATTCTCTGCCACAAAAGGTGCAAGTGA 672
Query 660 GTAGCAATGAGAATCTTGACGAAGCGAAGTTCTTAGAATCATACCATAAACCAATTCCCA 719
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 673 GTAGCAATGAGAATCTTGATGAAGCGAAGTTCTTAGAATCATACCACAAACCAATTCCCA 732
Query 720 TCCATGGTACCATTGCCAAGAAACTCGGGATTAAAGCATTACCTGTAAGGCTCGATAGCC 779
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 733 TCCATGGTACCATTGCCAAGAAACTCGGGATTAAAGCATTACCTGTAAGGATCGATAGCC 792
Query 780 AAGCTAAGTATGCGGCTTTGTCGCGGGGAGACGCAGAGATATACTTGCGTTTCACTCTCA 839
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 793 AAGCTAAGTATGCGGCTTTGTCGCGAGGAGACGCAGAGATATACTTGCGTTTCACTCTCA 852
Query 840 GTGGATACCGTGAGTGTATTTGGGACCATGCTGCAGGTTCAATAATCACTACAGAAGCTG 899
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 853 ATGGATACCGTGAGTGTATTTGGGACCATGCACCTGGTTCAATAATCACTACAGAAGCTG 912
Query 900 GAGGTGTAGTGTGCGATGCTACAGGGAAATCTCTGGACTTCTCGAAGGGAAAGTATCTTG 959
|||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 913 GAGGCGTAGTGTGTGATGCTACAGGGAAATCTCTGGACTTCTCGAAAGGAAAGTATCTTG 972
Query 960 CTCACAAAACGGGGATCATAGTTACCACCAAGAAACTCAAGCCATGGATTTTGAAGGCAG 1019
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 973 CTCACAAAACGGGGATCATAGTTACCACCAAGAAACTCAAGCCATGGATATTGAAGGCAG 1032
Query 1020 TCAGAGAATCCATTGAAGAAGAGAATCTTTATTTCTGAGGCACAACAGAATCTGTACAAT 1079
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1033 TCAGAGAATCCATAGAAGAAGAGAATCTTTATTTCTGAGGCACAACAGAAACTGTACAAT 1092
Query 1080 ACAGTATTTGTATTTGTCCGAACTAGTAACTGGTGTATATTCTTAGTTCATATATTGTAT 1139
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||
Sbjct 1093 ACAGTATTTGTATTTGTCTGAACTAGTAATTGGTGTATATTCTTAGTTCATATATCGTAT 1152
Query 1140 ACATCAGATATGAAAGATATTTGTGCTTAGATAATGAATAATGATACTAAGGAGGATTCG 1199
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 1153 ACATCAGATATGAAAGATATTTTTGCTTAGATAATGAATAATGATACTAAGGAAGATTCG 1212
Query 1200 ATTTTACTTC 1209
||||||||||
Sbjct 1213 ATTTTACTTC 1222
> AT5G09290.1 | Symbols: | Inositol monophosphatase family protein
| chr5:2882427-2884229 FORWARD LENGTH=1176
Length=1176
Score = 326 bits (176), Expect = 4e-88
Identities = 410/523 (78%), Gaps = 16/523 (3%)
Strand=Plus/Plus
Query 9 TTTCAATGTCTTATGAGAAGGAGCTAGCCGCTGCAAAGAAAGCTGTCTCTCTAGCTGCTC 68
|||| ||| |||| ||||| ||||| || ||||| |||||||| ||||||||||||||||
Sbjct 3 TTTCGATGCCTTACGAGAAAGAGCTCGCTGCTGCTAAGAAAGCCGTCTCTCTAGCTGCTC 62
Query 69 GTCTCAGCCAGGAAGTTCAGAAGACTCTGTTGCAATCCCAAGTATGGAAAAAATCCGATA 128
|||||||||||||||| |||||| ||||||||||||| | || || |||||| ||||
Sbjct 63 GTCTCAGCCAGGAAGTGCAGAAGTCTCTGTTGCAATCAGATGTCCGGTCAAAATCTGATA 122
Query 129 GAAGTCCAGTTACTGCAGCTGATTACGGCTCACAAGCTGTAG-TTAGTCTTGTATTGGAG 187
|||||| ||||| || |||||||| || || |||||||| | | |||| |||| | |||
Sbjct 123 AAAGTCCGGTTACAGCTGCTGATTATGGATCCCAAGCTGT-GATCAGTCATGTACTAGAG 181
Query 188 AGGGAGCTCCAACCTGATA-AACTGTCA-TTAGTAGCCGAAGAGGAA-ACTGGAGATCTG 244
|| || || || ||||| | ||| | | || || || ||||| ||| | | |||||||
Sbjct 182 AGAGAACTTCACCCTGA-ACCACTAT-ACTTGGTTGCTGAAGA-GAATGCAGAAGATCTG 238
Query 245 CGGAAAAAGGGAAG-TGAGTTGTTTCTACAAGGTATTAC-AACACTTGTGAA-AGATACT 301
| || || || | ||| |||||| || | ||||| || |||||||| | || ||
Sbjct 239 CACAAGAATGG-CGCCGAGGAATTTCTAGAAAGCATTACTAA-GCTTGTGAACA-ATGCT 295
Query 302 CTAGCTTCTGAGGAATCGTACACCGGCTCTCCTCTATCCACAGATGATGTGTTAAATGCT 361
||||||||||| || || ||| || |||| |||| || | |||||||| || ||
Sbjct 296 CTAGCTTCTGATGATTCCTACGCCAACTCTTCTCTTTCAATGGATGATGTAAGGAAGGCG 355
Query 362 ATAGACTGCGGTAAATCAGAAGGCGGTAGCAGCGGTTC-CCACTGGGTTCTTGACCCTAT 420
|||||| ||| | ||| |||||||| ||| || | ||| ||| ||||||| ||| |
Sbjct 356 ATAGACCACGGGAGGTCACAAGGCGGTTCCAGTGG-CCGCCATTGGATTCTTGATCCTGT 414
Query 421 AGATGGAACCAGAGGATTTGTAAGAGGAGAGCAATATGCTGTGGGACTAGCGTTGCTTGT 480
|||||||||||||| ||||||| ||||||| |||| ||||||| | |||| ||||||||
Sbjct 415 TGATGGAACCAGAGGGTTTGTAAAAGGAGAGGAATACGCTGTGGCATTAGCTTTGCTTGT 474
Query 481 GGAAGGCAAAGTGGTGCTTGGTGTCATGGCTTGCCCGAATCTT 523
|||||||||||| ||||| |||||||||||||||||||| |||
Sbjct 475 GGAAGGCAAAGTAGTGCTCGGTGTCATGGCTTGCCCGAAACTT 517
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59387244735
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5