BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496617 Length=1568 Score E Sequences producing significant alignments: (Bits) Value AT5G64190.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 2420 0.0 > AT5G64190.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:25679432-25681265 FORWARD LENGTH=1621 Length=1621 Score = 2420 bits (1310), Expect = 0.0 Identities = 1477/1559 (95%), Gaps = 5/1559 (0%) Strand=Plus/Plus Query 14 AGAAGTTCCCTGATGTATTCACTTGGATACAGAACATCCCACAAATCACCAAATGGCGCA 73 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 8 AGAAGTTCCCTGATGTATTCACTTGGATACAAAACATCCCACAGATCACCAAATGGCGCA 67 Query 74 CAACTTCTCTTTCCTTTTGCATTTGCCCTTCAACTTCTGATTTTCCGAATTCAAACCTAA 133 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct 68 CAACTTCTCTTCCCTTTTGCATTTGCCCTTCAACTTCTGATTTTCCAAATTCAACCCTAA 127 Query 134 ATCTCATAGCACAAAAGAACCCTAACCCTACAGTTCCCACTTTCTCCATCATCGTCCAAT 193 |||||| ||||||||||| ||||| ||||| |||| ||||||||||||||||||||||| Sbjct 128 ATCTCACAGCACAAAAGAGCCCTAGCCCTAAAGTTGTCACTTTCTCCATCATCGTCCAAT 187 Query 194 CTAATAATCATTCTCCTTTGTATCTTTGGACGACTAAACAGGACCTCAACATCAACCCAA 253 | ||||||||||||||||||||||||||||| |||||||| || |||| ||||||||||| Sbjct 188 CCAATAATCATTCTCCTTTGTATCTTTGGACCACTAAACAAGAGCTCAGCATCAACCCAA 247 Query 254 ACTCACCAAACCCTTTCGATGAACAAACAATCGTCTCTTTGCTCTTCAATTTCGTCGAAT 313 |||||||||||||||||||||||| ||||||| ||||| | |||||||||||||||||| Sbjct 248 ACTCACCAAACCCTTTCGATGAACTAACAATCATCTCTCTCCTCTTCAATTTCGTCGAAA 307 Query 314 CTATCTTAACCTATACCTCTAATAGTTCCAACTATTCAACGATCAAAATCCCTAACCCCA 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 308 CTATCTTAACCTATACCTCTAATAGTTCCAACTATTCAACGATCAAAATCCCTAACTCCG 367 Query 374 ATTCATCCAAGATCGACGGTCTTAAAGACATATTCAACGCCGTGATTCTCACTCTCTTGT 433 ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| || Sbjct 368 ATTCATCCAAGATCGGCGGTCTTAAAGACATAGTCAACACCGTGATTCTCACTCTCTCGT 427 Query 434 TCGTCGTTTGCGTCTACGAAGCTCCTTTGTATCTCCGTGAAAACTGCCTCAATACGCTCA 493 |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct 428 TCGTTGTTTGCGTCTACGAAGCTCCTCTGTATCTCCGTGAAAACTGCCTCAATACCCTCA 487 Query 494 AGAACCATTTGGTTACTTGTCATGCACGGCAAGCGACCGTATCTCTGATGAAGCTTCTAG 553 ||||||||||| ||||||||||| |||||| ||| || ||||||||||||||||||||| Sbjct 488 AGAACCATTTGATTACTTGTCATACACGGCGAGCTACTATATCTCTGATGAAGCTTCTAG 547 Query 554 GGTCTAATTTGGAAGAGCAGTGGATGAGAACGGTGAATCTAGCGTTGACAAATTGGATCA 613 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 548 GGTCTAATTTGGAAGAGCAGTGGATGAGAACAGTGAATCTAGCGTTTACAAATTGGATCA 607 Query 614 TTGAGCAGCGTCGTTGTGAGTCCACCAAG---ACAACAACTCCTTTGTTCTCTTACGCTG 670 | |||||||||||| || |||| |||||| |||||||||||||||||||||||||||| Sbjct 608 TCGAGCAGCGTCGTAGTCAGTCAACCAAGATCACAACAACTCCTTTGTTCTCTTACGCTG 667 Query 671 TTTCGGCTTATGGATTGTGGAAAGTGCAATTGTATTGTCCGGTTGAAGCCATGGAAATAG 730 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 668 TTTCGGCTTATGGATTGTGGAAAGTGCAATTGTATTGTCCCGTTGAAGCCATGGAAGTAG 727 Query 731 AGAGATCGAGCAACCCAACGGCTGATTCGAGATTGTTGTTCTCTCTCAAGTTTAATCAGC 790 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 728 AGAGATCGAGCAACCCAACGGCTGATTCGAGATTGTTGTTCTCTCTCAAGTTTAATCAGC 787 Query 791 TTGAAGGTGTTATGCAATTCAATCACAAAGTTGTAGTTAGAGACAAGTGGATCGATGTGA 850 |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 788 TTGAAGGTGTGATGCAGTTCAATCACAAAGTTGTAGTTAGAGACAATTGGATCGATGTGA 847 Query 851 TCGTGAAGATAGACAACATCAGATACGATGTAATAAAGCTTGTAAACGAGAAACTGATGT 910 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 848 TCGTGAAGATAGACAACATCAGATACGATGTAATAAAGCTTGTAAACGAGAAACTGATGT 907 Query 911 CGAGAAGAGGAGCAGGAGAGCACGAAAAGCATTTCCCATCAAGGATCTCTCTGCAACTAA 970 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 908 CGAGAAGAGGAGCAGGGGAGCACGAAAAGCATTTCCCATCAAGGATCTCTCTGCAACTAA 967 Query 971 CTCCAACTCTCCAAACCGATTTCATAAGCGTTTCGGTTAGCAAATCATCAAACAATCCAG 1030 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 968 CTCCTACTCTCCAAACCGATTTCATTAGCGTTTCGGTTAGCAAATCATCAAACAATCCGG 1027 Query 1031 GACGAGAGTTTGAAGTCGAGAGATCTATCGAAGGCTCATTCGATCCACCAAACTCACTAG 1090 || ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct 1028 GAAGAGAGTTTGAAGTCGAGAGATCTATTGAAGGCTCGTTCGATCCACCAAACTCACTAG 1087 Query 1091 GCTTAAGAGTCGCTGGACGAGAAGCCTCGACCATGACAATGACCCCATGGAAATTCGAGC 1150 |||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct 1088 GCTTAAGAGTTGCTGGACGAGAAGCCTCAACCATGACAATGACCCCGTGGAAATTAGAGC 1147 Query 1151 AATCTGTGCTCGGCTACACAGCTAATCTAAACTGGATCTTGTACGATAGCAGCGTTGGAG 1210 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1148 AATCTGTGCTCGGCTACACAGCTAATCTAAACTGGATCTTGTATGATAGCAGCGTTGGAG 1207 Query 1211 GAAGAGAGGTTTTTTCGACAAAGCCCTCACGGTTTTCGATAATGAGCCCAAGGTCTTGGT 1270 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct 1208 GAAGAGAGGTTTTTTCGACAAAGCCGTCACGGTTTTCAATAATGAGCCCAAGGTCTTGGT 1267 Query 1271 TTAAGGATCGGTATGCAAGGGCGTATCGGTCATTTACGAGGAGAGGAGGAGTGATATTTG 1330 |||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 1268 TTAAGGATAGGTATGCAAGAGCGTATCGGTCATTTACGAGGAGAGGAGGTGTGATATTTG 1327 Query 1331 CAGGGGATGAGTATGGAGAGAGTGTGGTGTGGAAAATTGGGAAAGGAGCATTGGGGAGAA 1390 ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| ||| Sbjct 1328 CAGGGGACGAGTATGGAGAGAGTGTGGTGTGGAAGATTGGAAAAGGAGCATTGGGGGGAA 1387 Query 1391 CAATGGAGTGGGAGATTAAAGGGTTTATTTGGTTGACATATTGGCCAAATAAGTATAAGA 1450 ||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| Sbjct 1388 CAATGGAGTGGGAGATTAAAGGGTTTATTTGGTTGACTTACTGGCCAAATAAGTACAAGA 1447 Query 1451 CTTTTTACCATGAGACTCGGAGATTGGAGTTTACACAGCTTCTTAATCTCACCATTGCTT 1510 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1448 CTTTTTACCATGAGACTCGTAGATTGGAGTTTACACAGCTTCTTAATCTCACCATTGCTT 1507 Query 1511 AACCT-AAACCAAGAACATGTTATTACTTCTTTGTGATTTAAACTTTACCTTGGTAAAG 1568 ||| | |||| || |||||||||||||||||||||||| | |||||||| ||||||||| Sbjct 1508 AACTTTAAACAAA-AACATGTTATTACTTCTTTGTGATCTCAACTTTACATTGGTAAAG 1565 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77409240390 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5