BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496651
Length=1858
Score E
Sequences producing significant alignments: (Bits) Value
AT5G64430.1 | Symbols: | Octicosapeptide/Phox/Bem1p family pro... 2486 0.0
> AT5G64430.1 | Symbols: | Octicosapeptide/Phox/Bem1p family protein
| chr5:25762270-25764154 REVERSE LENGTH=1885
Length=1885
Score = 2486 bits (1346), Expect = 0.0
Identities = 1744/1919 (91%), Gaps = 95/1919 (5%)
Strand=Plus/Plus
Query 1 ATTTCTTTCTAAATTCTTCTCTTCATGAATTAATCCCCCAACaaaaaaaaaaaaaaTCAT 60
|||||||||||| |||||||||||||||||||| |||| | || ||||||||||||
Sbjct 1 ATTTCTTTCTAATTTCTTCTCTTCATGAATTAA---GCCAA-ACCAACAAAAAAAATCAT 56
Query 61 TTAATTTTCGGC-GAGAGATGGAGAAATTCTCGTACAACTCTTATCCAGATTCAACCGAC 119
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 57 TTAATTTTC-GCGGAGAGATGGAGAAATTCTCGTACAACTCTTATCCAGATTCAACCGAC 115
Query 120 TCGTCACCGAGATCTCGTGAGATCGAATTCGATAACCCGCC---TCCATGGGATGATCAG 176
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 116 TCGTCACCGAGATCTCGTGAGATCGAATTCGATAACCCGCCGCCTCCATGGGATGATCAG 175
Query 177 AACCAGAACCAGCAGCAACAGAGCTACAAGGTGAGGTTTATGTGTAGCTATGGCGGCAAG 236
|||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||
Sbjct 176 AACCAGAACCAGCAGCAACATAGCTACAAGGTGAAGTTTATGTGCAGCTATGGCGGCAAG 235
Query 237 ATTCAGCCACGGCCTCATGATAATCAGCTTACTTATGTTAACGGAGAAACCAAGATCCTC 296
||||||||||||||||| ||||||||||| ||||| || ||||||||||| ||||| ||
Sbjct 236 ATTCAGCCACGGCCTCACGATAATCAGCTCACTTACGTAAACGGAGAAACGAAGATTCTT 295
Query 297 TCCGTTGATCGCGGGATTAGATTCCCTGTTTTAGCTTCCAAACTCTC-AGCCGTATGCGG 355
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 296 TCCGTTGATCGCGGGATTAGATTCCCTGTTTTAGCTTCCAAACTCTCCA-CCGTATGCGG 354
Query 356 CGGCGGTGATGGCGGCGGAGGAGAGGTTACGTTTAAGTATCAGCTTCCAGGAGAAGACTT 415
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 355 CGGCGGTGATGGCGGCGGAGGAGAAGTTACGTTTAAGTATCAGCTTCCGGGAGAAGACTT 414
Query 416 AGACGCCTTGATCTCGGTTACGAACGATGATGATCTGGAGCATATGATGCACGAGTACGA 475
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 AGACGCTTTGATCTCGGTTACGAACGATGATGATCTGGAGCATATGATGCACGAGTACGA 474
Query 476 TCGGTTGCTTCGTTTGTCGTCTAAGCCAGCGAGGATGCGTTTGTTTCTTTTCCCGGCTTC 535
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 475 TCGCTTGCTTCGTTTGTCGTCTAAGCCAGCGAGGATGCGTTTGTTTCTCTTCCCGGCTTC 534
Query 536 TTCTGCTTCCGGTGGATTTGGTTCTCAAAGTTCGACTCAATCGGATCGAGATCGCTTCGT 595
||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 535 TTCTG-----G----ATTTGGTTCTCAAAGTTCGACTCAATCGGATCGAGATCGCTTCGT 585
Query 596 CGAGGCGTTAAACACTGTTCCGAGGCTATCTGAATCGGAGAAATCCGTAACTGCTCCTCC 655
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 586 CGAGGCGTTGAACACTGTTCCTAGGCTATCTGAATCGGAGAAATCCGTAACTGCTCCTCC 645
Query 656 CAATAATGCGGATTTTTTGTTTGGATCCGAGAAAGTTGCAGCTCCGCCGCCGCCACCACC 715
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 646 GAATAATGCGGATTTTTTGTTTGGATCGGAGAAAGTTGCAGCTCCGCCGCCGCCACCACC 705
Query 716 GGCTGAGGTGAAATTACCAGTACCGGCGGTGATAGAACCGCCTTTGTTCAACGATCCGCG 775
|||||||||||||||||| || || | || | |||||||||||||||| |||||||||||
Sbjct 706 GGCTGAGGTGAAATTACCGGTTCCTGTGGCGTTAGAACCGCCTTTGTTTAACGATCCGCG 765
Query 776 TGTGATTCAACCGGATCACGTCGTCAATCCGATGGAAATTCAAAGACAAATGCAGGAATT 835
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 766 TGTGATTCAACCGGATCACGTCGTAAATCCGATGGAAATTCAAAGACAAATGCAGGAATT 825
Query 836 TCAGAGGATGCATATTAGGGATCAAGAACAACAGCAACAACAACAGGAAGCTGTATACAG 895
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 826 TCAGAGGATGCATATTAGGGATCAAGAACAACA--A-CAACAACAGGAAGCTGTATACAG 882
Query 896 GAGGAAGAGTAACGAAGACGGTTTAATGGACACCGGAGGTGGATACTTTTCTCCGCCGTA 955
|||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||
Sbjct 883 AAGGAAGAGTAACGAAGACGGTTTAATAGAAACCGGAGGTGGATACTTCTCTCCACCGTA 942
Query 956 CATACAAAATCCGGCGCCGC-A-----AC--C-GACGATTCCTCAAACGAATCCACAAGC 1006
|||||||||||| ||||| | | || | ||||||||||||||||||||| |||||
Sbjct 943 CATACAAAATCCTGCGCCACCACCGCCACAGCAGACGATTCCTCAAACGAATCCGCAAGC 1002
Query 1007 TCCACCTCCTCCGATGACGACCTTCTGGCAAGGAAACCACAATCCAGGAGGCGTATTTCC 1066
||| ||| ||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1003 TCC---TCC---GATGACGACTTTCTGGCAAGGAAACCACAATCCAGGAGTCGTATTTCC 1056
Query 1067 AACAACCACACCA-GGATTAGGATTACCAGAGCAACCGGTATACATGATTCCATC-CC-- 1122
||||||||||| | ||||||||||||||||||||||| || |||||||| ||||| ||
Sbjct 1057 AACAACCACAC-ATGGATTAGGATTACCAGAGCAACCAGTTTACATGATCCCATCTCCAT 1115
Query 1123 C---ATCTCCGGTCTACCACGCGCCACCACCGCCTCAACCGCAAGGTGTCATAAGACCAA 1179
| ||||||||| ||||||||||||||||| || ||||||||||||||||| |||||||
Sbjct 1116 CTCCATCTCCGGTGTACCACGCGCCACCACCACCGCAACCGCAAGGTGTCATCAGACCAA 1175
Query 1180 TAGCT-ACAGGACAAGTAAACCATGGTGGCTACTATCCTCCGGTACAGCGAATGGCTTCA 1238
|| || ||||||||||||||||| || ||||||||||||| ||||||| || ||||||||
Sbjct 1176 TA-CTTACAGGACAAGTAAACCAAGGCGGCTACTATCCTCAGGTACAGAGAGTGGCTTCA 1234
Query 1239 GATACTTACAGGGAACCAC-CG--T-ACC--AC---GTGGCTCAGCCAC--CA---A--T 1282
||||||||||| ||||||| | | ||| || ||||||||||||| || | |
Sbjct 1235 GATACTTACAGAGAACCACACCAATCACCGTACAACGTGGCTCAGCCACTTCAGGCACCT 1294
Query 1283 A--GGAACAAAAGCT-CAACAACAACAACAACCTCCTCCTC---AGCCTTTTACCTCTGG 1336
| ||||||||||| || |||||||||||||||||||||| ||||||||||||||||
Sbjct 1295 ATAGGAACAAAAGCAGCA-CAACAACAACAACCTCCTCCTCCTCAGCCTTTTACCTCTGG 1353
Query 1337 TCCTCCTCCACCGCAATACACGGCCGTTCCACCGCCACGACAAGTAGTAGGATTACCAGA 1396
|||||| |||||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct 1354 TCCTCCACCACCGCAATACACCGCAGTACCACCGCCACGACAAGTAGTAGGATTACCAGA 1413
Query 1397 TACATCAGCGTATACTCAGGTGACTTACACCGGAGGAATGGGGAAACAAGTTTATTACAC 1456
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1414 TACATCAGCGTATACTCAGGTGACTTACACTGGAGGAATGGGGAAACAAGTTTATTACAC 1473
Query 1457 AGAGGCTCCACCGCCGCAGTACCATGGAGTTGGATTACCTGTAACTGGTATGAGTGAATT 1516
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1474 GGAGGCTCCACCGCCGCAGTACCATGGAGTTGGCTTACCTGTAACTGGTATGAGTGAATT 1533
Query 1517 GAGAACTGGACCGGACGGGAAGCTTGTTGCCATGAACATGGCACCTAAAGTTTCATCTCA 1576
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1534 GAGAACTGGACCGGACGGGAAGCTTGTTGCTATGAACATGGCACCTAAAGTTTCATCTCA 1593
Query 1577 GAGTTCAGATTCGGCTGTTTGATTAATGAGGTATTTCATATGGTTGAATCAGATTATTGT 1636
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1594 GAGTTCAGATTCGGCTGTTTGATTGATGAGGTATTTCATATGGTTGAATCAGATTATTGT 1653
Query 1637 TAATCCATCCATTACAAGATATTTCATCATCTTTTATATATATA----------GTGTAA 1686
||||| | ||||||| | |||||||||||||||||||||||| ||||||
Sbjct 1654 TAATC--T--ATTACAACAAATTTCATCATCTTTTATATATATATATATATATAGTGTAA 1709
Query 1687 TTGAGATCACTTTGGTGTCTGATAAATAATGTCttttt-tt---C--TGTATCTACTTGT 1740
|| ||||||||||||||||||||||||||||| ||||| || | | |||||||||||
Sbjct 1710 TTAAGATCACTTTGGTGTCTGATAAATAATGTTTTTTTCTTTTTCCCTTTATCTACTTGT 1769
Query 1741 TTATTTTATCTTATGATGATGTTCTTGATTCTGCAACTTCCATCACTTTGCTTAAATTCA 1800
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||
Sbjct 1770 TTATTTTATCTTATGATGATGTTCTTGATTCTGCAACTTCCATCGCGTTGCTTAAATCCA 1829
Query 1801 GTCTCGTGTTCATTT-ACTTGCTTTTTTATCTGAGAACCTTTGAAGCCTTTTTACCTTT 1858
|||| ||| ||||| | |||| ||| |||||||||||||| ||||| ||||||||||
Sbjct 1830 GTCTATTGTGCATTTGA-TTGCATTT--ATCTGAGAACCTTTTAAGCCATTTTACCTTT 1885
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91967398440
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5