BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496723
Length=2049
Score E
Sequences producing significant alignments: (Bits) Value
AT5G65010.2 | Symbols: ASN2 | asparagine synthetase 2 | chr5:25... 3201 0.0
AT5G10240.1 | Symbols: ASN3 | asparagine synthetase 3 | chr5:32... 1989 0.0
> AT5G65010.2 | Symbols: ASN2 | asparagine synthetase 2 | chr5:25969190-25972575
FORWARD LENGTH=2071
Length=2071
Score = 3201 bits (1733), Expect = 0.0
Identities = 1966/2075 (95%), Gaps = 30/2075 (1%)
Strand=Plus/Plus
Query 1 CATTGTTGTTTGTTTTCGTTGCCACACTAACACAATGTGTGGGATTCTCGCTGTTCTTGG 60
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1 CATTGTTATTTGTTTTCGTTGCCACTCTAACACAATGTGTGGGATTCTCGCTGTTCTTGG 60
Query 61 TTGCATCGACAACTCTCAAGCTAAACGTTCTCGTATCATCGAACTCTCTCGCAGATTGAG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTGCATCGACAACTCTCAAGCTAAACGTTCTCGTATCATCGAACTCTCTCGCAGATTGAG 120
Query 121 GCATAGAGGTCCTGATTGGAGTGGACTCCATTGTTATGAAGGTTGTTATCTTGCTCATGA 180
||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 121 GCACAGAGGTCCTGATTGGAGTGGACTCCATTGTTATGAAGATTGTTATCTTGCCCATGA 180
Query 181 ACGTTTAGCCATCATTGACCCTACTTCTGGAGACCAACCTCTCTATAACGAAGACAAGAC 240
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 181 GCGTTTAGCCATCATTGACCCTACTTCAGGAGACCAACCTCTCTATAACGAAGACAAGAC 240
Query 241 CGTCGCTGTCACTGTCAATGGAGAGATATACAACCATAAGATTTTGCGTGAAAAGCTAAA 300
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 241 CGTCGCTGTCACTGTAAATGGAGAGATATACAACCACAAGATTTTGCGTGAAAAGCTTAA 300
Query 301 GTCTCATCAATTCCGTACTGGTAGTGACTGTGAAGTGATTGCACATCTTTATGAAGAACA 360
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 301 GTCTCATCAGTTCCGTACTGGTAGTGACTGTGAAGTGATTGCACATCTTTACGAAGAACA 360
Query 361 TGGAGAGGAATTTATCGACATGTTAGATGGAATGTTCGCGTTTGTCCTTCTTGATACTCG 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 361 TGGAGAGGAATTTATCGACATGTTGGATGGAATGTTCGCGTTTGTCCTTCTTGATACTCG 420
Query 421 CGACAAAAGTTTTATTGCTGCAAGGGACGCGATTGGTATCACTCCACTTTACATTGGATG 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 421 CGACAAAAGTTTTATTGCTGCAAGGGACGCTATTGGTATCACTCCACTTTACATTGGATG 480
Query 481 GGGTCTTGATGGTTCTGTCTGGTTTGCTTCCGAGATGAAAGCTCTTAGTGATGATTGTGA 540
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 481 GGGTCTTGATGGTTCTGTCTGGTTTGCTTCGGAGATGAAAGCGCTTAGTGATGATTGTGA 540
Query 541 ACAGTTTATGTCTTTTCCTCCTGGCCACATCTACTCAAGTAAACAAGGAGGGCTTAGGAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 ACAGTTTATGTCTTTTCCTCCTGGCCACATCTACTCAAGTAAACAAGGAGGGCTTAGGAG 600
Query 601 GTGGTACAATCCTCCGTGGTACTCTGAGCAGGTTCCTTCAACCCCATATGATCCTTTAGT 660
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 601 GTGGTACAATCCTCCGTGGTACAATGAGCAGGTTCCTTCAACCCCATATGATCCTTTAGT 660
Query 661 TCTGCGCAATGCTTTCGAGAAGGCTGTAGTAAAGAGACTTATGACTGATGTGCCTTTTGG 720
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 661 TCTGCGCAATGCTTTCGAGAAGGCTGTAATAAAGAGACTTATGACTGATGTGCCTTTTGG 720
Query 721 AGTTCTCCTATCTGGAGGATTGGACTCGTCTCTTGTTGCTGCAGTAGCATTACGCCATTT 780
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 721 AGTTCTCCTATCTGGAGGATTGGACTCGTCTCTCGTTGCTGCAGTAGCATTACGCCATTT 780
Query 781 GGAAAAATCGGAAGCTGCTCGTCAATGGGGTTCACAATTGCACACGTTTTGCATCGGATT 840
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 781 GGAAAAATCAGAAGCTGCTCGTCAATGGGGTTCACAATTGCACACGTTTTGCATCGGTTT 840
Query 841 GCAGGGATCGCCAGATCTTAAAGCTGGCAGAGAAGTCGCTGACTATCTTGGAACACGCCA 900
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 841 GCAGGGATCGCCAGATCTTAAAGCTGGCAGAGAAGTTGCTGACTATCTTGGAACACGCCA 900
Query 901 CCACGAGTTTCAGTTTACTGTTCAGGACGGGATAGATGCGATAGAGGAAGTCATTTACCA 960
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 901 CCACGAGTTTCAGTTTACAGTTCAGGACGGGATAGACGCGATAGAGGAAGTCATTTACCA 960
Query 961 TATTGAGACCTATGACGTGACTACAATAAGAGCTAGCACCCCAATGTTTCTTATGTCAAG 1020
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 961 TATTGAGACTTATGACGTTACTACAATAAGAGCTAGCACCCCAATGTTTCTTATGTCCAG 1020
Query 1021 AAAAATTAAATCTTTAGGTGTAAAGATGGTTCTTTCTGGGGAAGGTTCTGATGAAATTCT 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1021 AAAAATTAAATCTTTAGGTGTAAAGATGGTTCTTTCTGGGGAAGGTTCTGATGAAATACT 1080
Query 1081 CGGGGGATACTTGTACTTCCATAAGGCGCCCAACAAGAAAGAATTTCATGAAGAAACATG 1140
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1081 GGGGGGATACTTGTACTTCCATAAGGCTCCCAACAAGAAAGAATTTCATGAAGAAACATG 1140
Query 1141 CCGAAAGATCAAGGCTCTCCACCAGTTTGATTGTTTGAGAGCTAACAAATCAACTTCTGC 1200
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1141 CCGAAAGATCAAAGCTCTCCACCAATTTGATTGTTTGAGAGCTAACAAATCAACTTCTGC 1200
Query 1201 GTGGGGTGTCGAAGCTCGTGTGCCTTTCCTAGATAAAGAATTCTTGAATGTCGCAATGAG 1260
|||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct 1201 GTGGGGTGTCGAAGCTCGTGTGCCTTTCCTAGATAAAGAATTTTTAAATGTTGCAATGAG 1260
Query 1261 CATCGATCCAGAGTGGAAGATGATCAAGCCTGATCTCGGAAGGATCGAGAAGTGGGTGCT 1320
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 CATCGATCCAGAGTGGAAGTTGATCAAGCCTGATCTCGGAAGGATCGAGAAGTGGGTGCT 1320
Query 1321 ACGCAATGCCTTTGATGATGAACAACGACCTTATCTACCAAAGCATATTCTGTATAGACA 1380
|||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct 1321 ACGCAATGCCTTTGATGATGAAGAACGACCTTATCTACCAAAGCACATTCTATATAGACA 1380
Query 1381 AAAAGAACAGTTTAGTGATGGAGTTGGGTATAGCTGGATTGATGGTCTGAAAGATCATGC 1440
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1381 GAAAGAACAGTTTAGTGATGGAGTTGGGTATAGCTGGATAGATGGTCTGAAAGATCATGC 1440
Query 1441 AAACAAACATGTCTCTGATACTATGCTGTCGAACGCAAGCTTTGTCTTCCCCGATAACAC 1500
||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1441 AAATAAACATGTCTCTGATACTATGCTGTCAAACGCAAGCTTTGTCTTCCCGGATAACAC 1500
Query 1501 ACCTCTGACAAAAGAAGCTTACTACTACAGAACCATCTTCGAAAAGTTCTTCCCTAAGCA 1560
|||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1501 ACCTCTGACAAAAGAAGCGTACTACTACAGAACCATCTTCGAGAAGTTCTTCCCGAAGCA 1560
Query 1561 GAGTGCTGCAAGGGCGACAGTACCAGGAGGGCCAAGTATAGCTTGCAGTACCGCAAAAGC 1620
||||||||| || ||||| ||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1561 GAGTGCTGCTAGAGCGACTGTACCAGGAGGTCCAAGTATAGCTTGCAGTACCGCGAAAGC 1620
Query 1621 TGTGGAATGGGATGCTACTTGGTCAAAGAATCTTGATCCGTCAGGCCGTGCGGCTCTTGG 1680
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 TGTAGAATGGGATGCAACTTGGTCAAAGAATCTTGATCCGTCAGGCCGTGCGGCTCTTGG 1680
Query 1681 AGTCCATGTTGCAGCTTATGAAGAGGATAAAGCTGCTGCTGCTGCTAAGGTTGGATCAGA 1740
||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||
Sbjct 1681 AGTTCATGTTGCAGCTTATGAAGAGGATAAAGCAGCTGCTGCTGCTAAGGCTGGATCGGA 1740
Query 1741 TTCAGTAGATTCTC--CCTAAGAATGGAATATAAGAGAACA-C--TACA---A---AGGT 1789
|| ||||||| ||| ||||||||||||| ||||||||||| | |||| | |||
Sbjct 1741 TTTAGTAGATCCTCTTCCTAAGAATGGAACATAAGAGAACAACACTACAGGCATTGAGGA 1800
Query 1790 T-TAA-----T-T------CTTCTACAGAGAGTGAT-GTTATCTTCTAGAGGGATCAATG 1835
| ||| | | |||||||| |||| ||| |||||||||||||||||||||||
Sbjct 1801 TATAAGCAAATGTTTTATTCTTCTACACAGAGAGATCGTTATCTTCTAGAGGGATCAATG 1860
Query 1836 AATAAAAGCTTCGTCCATTTCTATCTGAAGATTACATGGATCTCCAGTTACTGCAAAGTG 1895
||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||| |||
Sbjct 1861 AATAAAAGCTTCGTCCATTTCTAGCTGGAGATTCCATGGATCTCCAGTTAGTGCAA-GTG 1919
Query 1896 ATACACGATGCCTACATTTGTACCTAAGTTTCTGCATGTTTTGTCGTTCTTGTGTGTTTT 1955
||||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 1920 ATACACGTTGTCTACATTTGTACCTAAGTTTCTGCATTTTTTGTCGTTCTTTTGTGTT-- 1977
Query 1956 AGACAAGTATTGGACCCTAGATGATACTTCATTTTCTTAGAAGTTAAATTTGATGAATCC 2015
|||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 1978 AGACAAGTCTTGGACCCTAGATGATACTTCAGTTTCTTAGACGTTAAATTTGATGAATCC 2037
Query 2016 GAACATGTTCT-ATTACAAAGTCTGGCCTTTCTGC 2049
|||| |||| | ||| ||||| |||||||||||||
Sbjct 2038 GAACTTGTT-TGATTTCAAAGCCTGGCCTTTCTGC 2071
> AT5G10240.1 | Symbols: ASN3 | asparagine synthetase 3 | chr5:3212689-3216466
REVERSE LENGTH=2030
Length=2030
Score = 1989 bits (1077), Expect = 0.0
Identities = 1502/1707 (88%), Gaps = 30/1707 (2%)
Strand=Plus/Plus
Query 19 TTGCC-ACACTAACACAATGTGTGGGATTCTCGCTGTTCTT-GGTTGCATCGACAACTCT 76
||||| ||| | ||| ||||||||||||||||||| | || || ||| |||| ||||||
Sbjct 32 TTGCCGCCACCACCACCATGTGTGGGATTCTCGCTG-TGTTAGGCTGCGTCGATAACTCT 90
Query 77 CAAGCTAAACGTTCTCGTATCATCGAACTCTCTCGCAGATTGAGGCATAGAGGTCCTGAT 136
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 91 CAAGCTAAACGTTCCCGTATCATCGAACTCTCTCGCAGATTGAGGCATAGAGGTCCTGAC 150
Query 137 TGGAGTGGACTCCATTGTTATGAAGG-TTGTTATCTTG-CTCATGAACGTTTAGCCATCA 194
|||||||| || ||||||||||| || ||||||| ||| ||||||| ||||| || |||
Sbjct 151 TGGAGTGGTCTACATTGTTATGA-GGATTGTTAT-TTGGCTCATGAGCGTTTGGCTATCG 208
Query 195 TTGACCCTACTTCTGGAGACCAACCTCTCTATAACGAAGACAAGACCGTCGCTGTCACTG 254
||||||| ||||||||||| ||||| |||||||||||||| |||||| | |||||||| |
Sbjct 209 TTGACCCCACTTCTGGAGATCAACCACTCTATAACGAAGATAAGACCATTGCTGTCACGG 268
Query 255 TCAATGGAGAGATATACAACCATAAGATTTTGCGTGAAAAGCTAAAGTCTCATCAATTCC 314
||||||||||||| |||||||| ||| |||||||||||| | |||||||| |||||||
Sbjct 269 TCAATGGAGAGATTTACAACCACAAGGCTTTGCGTGAAAATTTGAAGTCTCACCAATTCC 328
Query 315 GTACTGGTAGTGACTGTGAAGTGATTGCACATCTTTATGAAGAACATGGAGAGGAATTTA 374
||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 329 GTACTGGGAGTGATTGTGAAGTGATTGCCCATCTTTACGAAGAACATGGAGAGGAATTTG 388
Query 375 TCGACATGTTAGATGGAATGTTCGCGTTTGTCCTTCTTGATACTCGCGACAAAAGTTTTA 434
|||||||||| ||||| ||||| || ||||| ||||||||||| || |||||||| ||||
Sbjct 389 TCGACATGTTGGATGGCATGTTTGCATTTGTGCTTCTTGATACCCGAGACAAAAGCTTTA 448
Query 435 TTGCTGCAAGGGACGCGATTGGTATCACTCCACTTTACATTGGATGGGGTCTTGATGGTT 494
||||||||||||| || ||||||||||||||||| ||||| || |||||||| |||||||
Sbjct 449 TTGCTGCAAGGGATGCCATTGGTATCACTCCACTCTACATCGGGTGGGGTCTCGATGGTT 508
Query 495 CTGTCTGGTTTGCTTCCGAGATGAAAGCTCTTAGTGATGATTGTGAACAGTTTATGT-CT 553
|||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||
Sbjct 509 CTGTTTGGTTTGCTTCCGAGATGAAAGCACTTAGTGATGATTGTGAGCAGTTTATGTGCT 568
Query 554 TTTCCTCCTGGCCACATCTACTCAAGTAAACAAGGAGGGCTTAGGAGGTGGTACAATCCT 613
| || || ||||||||||| |||||||||||||| |||||||||||||||||||| ||
Sbjct 569 TCCCC-CCAGGCCACATCTATTCAAGTAAACAAGGTGGGCTTAGGAGGTGGTACAACCCC 627
Query 614 CCGTGGTACTCTGAGCAGGTTCCTTCAACCCCATATGATCCTTTAGTTCTGCGCAATGCT 673
||||||| ||||||| ||||||||||||||||||||||| |||| |||||||| ||
Sbjct 628 CCGTGGTTCTCTGAGGTTGTTCCTTCAACCCCATATGATCCCCTAGTGGTGCGCAATACT 687
Query 674 TTCGAGAAGGCTGT-AGTAAAGA-GACTTATGACTGATGTGCCTTTTGGAGTTCTCCTAT 731
|| ||||||||||| | |||| | |||| |||||||||||||||||||| || |||||||
Sbjct 688 TTTGAGAAGGCTGTTA-TAAA-ACGACTAATGACTGATGTGCCTTTTGGTGTCCTCCTAT 745
Query 732 CTGGAGGATTGGACTCGTCTCTTGTTGCTGCAGTAGCATTACGCCATTTGGAAAAATCGG 791
|||| ||||| || || || ||||||||| ||||||||||||||||| |||||||||| |
Sbjct 746 CTGGTGGATTAGATTCATCCCTTGTTGCTTCAGTAGCATTACGCCATCTGGAAAAATCAG 805
Query 792 AAGCTGCTCGTCAATGGGGTTCACAA-TTGCACACGTTTTGCATCGGATTGCAGGGATCG 850
|||||||| |||| ||||||||| || |||||||| ||||| ||||| ||| |||||||
Sbjct 806 AAGCTGCTTGTCAGTGGGGTTCA-AAGTTGCACACATTTTGTATCGGTTTGAAGGGATCC 864
Query 851 CCAGATCTTAAAGCTGGCAGAGAAGTCGCTGACTATCTT-GGAACACGCCACCACGAGTT 909
|| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct 865 CCGGATCTTAAAGCTGGCAGAGAAGTCGCTGACTAT-TTAGGAACTCGCCACCACGAGTT 923
Query 910 TCAGTTTACTGTTCAGGACGGGATAGATGCGATAGAGGAAGTCATTTACCATATTGAGAC 969
|| ||||| ||||||||||| |||||||| ||||| |||||||| |||||| |||||||
Sbjct 924 ACACTTTACAGTTCAGGACGGAATAGATGCCATAGAAGAAGTCATCTACCATGTTGAGAC 983
Query 970 CTATGACGTGACTACAATAAGAGCTAGCACCCCAATGTTTCTTATGTCAAGAAAAATTAA 1029
|||||| |||||||| || ||||| ||||| ||||||||||||||||| ||||||| ||
Sbjct 984 CTATGATGTGACTACTATTAGAGCCAGCACTCCAATGTTTCTTATGTCGCGAAAAATCAA 1043
Query 1030 ATCT-TTAGGTGTAAAGATGGTTCTTTCTGGGGAAGGTTCTGATGAAATTCTCGGGGGAT 1088
||| || ||||||||||||||||||||||||||||| |||||||||||| | || ||||
Sbjct 1044 ATCGCTT-GGTGTAAAGATGGTTCTTTCTGGGGAAGGCTCTGATGAAATTTTTGGAGGAT 1102
Query 1089 ACTTGTACTTCCATAAGGCGCCCAACAAGAAAGAATTTCATGAAGAAACATGCCGAAAGA 1148
| |||||||||||||| || ||||||||||| ||||||||||| |||||||| |||||||
Sbjct 1103 ATTTGTACTTCCATAAAGCTCCCAACAAGAAGGAATTTCATGAGGAAACATGTCGAAAGA 1162
Query 1149 TCAAGGCTCTCCACCAGTTTGATTGTTTGAGAGCTAACAAATCAACTTCTGCGTGGGGTG 1208
|||| ||||| || || | ||| || ||||| |||||||||||||||||||| |||||||
Sbjct 1163 TCAAAGCTCTTCATCAATATGACTGCTTGAGGGCTAACAAATCAACTTCTGCATGGGGTG 1222
Query 1209 TCGAAGCTCGTGTGCCTTTCCTAGATAAAGAATTCT-TGAATGTCGCAATGAGCATCGAT 1267
| || |||||||| |||||||| ||||||||||| | | |||||||||||||||||||||
Sbjct 1223 TTGAGGCTCGTGTACCTTTCCTCGATAAAGAATT-TATAAATGTCGCAATGAGCATCGAT 1281
Query 1268 CCAGAGTGGAAGATGATCAAGCCTGATCTCGGAAGGATCGAGAAGTGGGTGCTACGCAAT 1327
||||||||||||||||| | ||||||| | |||||||||||||| |||||| ||||||||
Sbjct 1282 CCAGAGTGGAAGATGATTAGGCCTGATTTGGGAAGGATCGAGAAATGGGTGTTACGCAAT 1341
Query 1328 GCCTTTGATGATGA-ACAACGACCTTATCTACCAAAGCATATTCTGTATAGACAAAAAGA 1386
|||||||||||||| | || ||||| ||||||||||| ||||| ||||| || |||||
Sbjct 1342 GCCTTTGATGATGAGAAAAAT-CCTTACCTACCAAAGCACATTCTATATAGGCAGAAAGA 1400
Query 1387 ACAGTTTAGTGATGGAGTTGGGTATAGCTGGATTGATGGTCTGAAAGATCATGCAAACAA 1446
|||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||||
Sbjct 1401 ACAGTTCAGTGATGGAGTTGGATACAGCTGGATTGATGGTCTAAAAGATCATGCAAACAA 1460
Query 1447 ACATGTCTCTGATACTATGCTG-TCGAACGCAAGCTTTGTCTTCCCCGATAACACACCTC 1505
|||||||||||| || |||||| | ||||||||||||||||||||| ||||||||||||
Sbjct 1461 ACATGTCTCTGAGACAATGCTGAT-GAACGCAAGCTTTGTCTTCCCTGATAACACACCTT 1519
Query 1506 TGACAAAAGAAGCTTACTACTACAGAACCATCTTCGAAAAGTTCTTCCCTAAGCAGAGTG 1565
|||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||
Sbjct 1520 TGACAAAAGAAGCTTACTACTACAGAACCATCTTTGAAAAGTTCTTCCCTAAG-AG--TG 1576
Query 1566 CTGCAAGGGCGACAGTACCAGGAGGGCCAAGTATAGCTTGCAGTACCGCAAAAGCTGTGG 1625
|||| || || || ||||||||||| |||||| | || || || || |||||||||||||
Sbjct 1577 CTGCTAGAGCAACTGTACCAGGAGGTCCAAGTGTGGCATGTAGCACAGCAAAAGCTGTGG 1636
Query 1626 AATGGGATGCTA-CTTGGTCAAAGAATCTTGATCCGTCAGGCCGTGCGGCTCTTGGAGTC 1684
||||||| || | |||||||| |||||||||| || ||||| |||||||||||||||||
Sbjct 1637 AATGGGACGC-AGCTTGGTCACAGAATCTTGACCCATCAGGTCGTGCGGCTCTTGGAGTT 1695
Query 1685 CATGTTGCAGCTTATGAAGAGGATAAA 1711
|||||| ||||||||| || ||||||
Sbjct 1696 CATGTTTCAGCTTATGGGGAAGATAAA 1722
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101555702535
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5