BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496743 Length=1819 Score E Sequences producing significant alignments: (Bits) Value AT5G65180.1 | Symbols: | ENTH/VHS family protein | chr5:260453... 2706 0.0 AT5G10060.1 | Symbols: | ENTH/VHS family protein | chr5:314574... 785 0.0 > AT5G65180.1 | Symbols: | ENTH/VHS family protein | chr5:26045361-26048031 FORWARD LENGTH=1809 Length=1809 Score = 2706 bits (1465), Expect = 0.0 Identities = 1714/1830 (94%), Gaps = 33/1830 (2%) Strand=Plus/Plus Query 1 GTAAGAAAAAGTAGAAATTAATAATGGCAGACGGCGTTAGGACAAAGAAAAAGGA-AACG 59 ||||||||||| ||||| | ||||||||||||||||||||||||||||||| || |||| Sbjct 1 GTAAGAAAAAGGAGAAA-T--TAATGGCAGACGGCGTTAGGACAAAGAAAAA-GAGAACG 56 Query 60 CCTTTCTAGGGTTTGGTTTATGGAA-GCTCCGCCGTAAGATTTGTTCTCCGCCGCCGCGT 118 ||||||||||||||||||||| ||| |||||||||||||| |||| |||||||||||||| Sbjct 57 CCTTTCTAGGGTTTGGTTTAT-GAACGCTCCGCCGTAAGAATTGTCCTCCGCCGCCGCGT 115 Query 119 TTT--CGTCGATTCAGAACAAAAAGATTCTTACTTTCGCCAATCTGTATCAATATCCATT 176 ||| ||||||||||||||| || |||| || |||| |||||||||||||||||||| || Sbjct 116 TTTCCCGTCGATTCAGAACAGAAGGATTATTGCTTTTGCCAATCTGTATCAATATCCGTT 175 Query 177 TGATTATCCTTCTAA-TTCGTGTAAAAACCATACAAGGTTTTCAGCTTCTTCCCCCCTTT 235 ||||||||||| ||| |||||||||||||||| ||||| |||||||||||| ||| | || Sbjct 176 TGATTATCCTTGTAATTTCGTGTAAAAACCATTCAAGG-TTTCAGCTTCTT-CCCTCGTT 233 Query 236 GTTCTAGGGTTTTGATTTGATTTTGGGTTGGGATGAGTAGTCCGTTCAGTGAAGAGATAC 295 || |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 234 CTT-TAGGGTTTAGATTTGATTTGGGGTTGGGATGAGTAGTCCGTTCAGTGAAGAGATAC 292 Query 296 TGATTGATAAGCTCGCCAAGCTCAACAGCACTCAGCAATCCATCCAAACTCTGTCACAGT 355 |||||||||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 293 TGATTGATAACCTCGCTAAGCTCAACAGCACTCAACAATCCATCCAAACTTTGTCACAGT 352 Query 356 GGTGTATAGTCCATCGTAGTGAAGCTGAGTTGGTTGTTACGACATGGGAGAAACAGTTTC 415 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 353 GGTGTATAGTCCATCGTAGTGAAGCTGAGCTGGTTGTTACGACATGGGAGAAACAGTTTC 412 Query 416 ACAGTACAGAGATTGCTCAGAAAGTGCCTCTCTTGTACCTTGCTAACGACATTCTTCAGA 475 |||||||| |||| | |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 413 ACAGTACACAGATAGGTCAGAAAGTGCCTCTCTTGTACCTTGCTAATGACATTCTTCAGA 472 Query 476 ACAGCAAGCGTCAGGGTAATGAGTTTGTGCAAGAGTTCTGGAAAGTTCTCCCTGGTGCTC 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 473 ACAGCAAGCGTCAGGGTAATGAGTTTGTGCAAGAGTTCTGGAAAGTTCTCCCTGGTGCTC 532 Query 536 TCAAAGATCTTGTTTCCTTGGGAGATGACTATGGAAAAGGCGTTGTTTCACGATTGGTTA 595 |||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 533 TCAAAGATATTGTTTCCTTGGGAGATGACTATGGAAAAGGCGTGGTTTCGCGATTGGTTA 592 Query 596 ATATATGGGAAGAGAGAAGAGTCTTTGGGTCCCGTTCAAAGAGTCTTAAAGATGTAATGC 655 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 593 ATATATGGGAAGAGAGAAGAGTCTTTGGATCCCGTTCAAAGAGTCTTAAAGATGTAATGC 652 Query 656 TCTCAGAAGAAGCTCCTCCACCACTTGATGTCAGTAAAAAGCGATTACGGGGATCTAAAT 715 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 653 TCTCAGAAGAAGCTCCACCACCACTTGATGTCAGTAAAAAGCGATTTCGGGGATCTAAAT 712 Query 716 CTGCGAAACGAGATTCAAAATCTGCCAAGATGAAATTAACAAATGGAGGTGTGACCGAGA 775 |||| |||||||||||||||||| |||| | ||||||| ||| |||||||||| |||||| Sbjct 713 CTGCAAAACGAGATTCAAAATCTACCAAAACGAAATTATCAAGTGGAGGTGTGTCCGAGA 772 Query 776 AGATAGTATCTGCATTCAATTTGGTTAGTGCAGAGAACTCAAATGAAGAGACAGAGATGA 835 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 773 AGATAGTATCTGCATTCAATTTGGTTCGTGCAGAGAACTCAAATGAAGAGACAGAGATGA 832 Query 836 ACAAATGCAAGTCTGCCGTTAGACGTATTAGAAAGATGGAGAAAGATGTTGAAGATGCCT 895 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 833 ACAAATGCAAGTCTGCCGTTAGACGTATCAGAAAGATGGAGAAAGATGTTGAAGATGCTT 892 Query 896 GCTCCACTGCAAAAGACCCGAGTAGAA-AATCATTGGCAAAAGAACTGGAAGAAGAAGAA 954 |||||||||||||||||||||| | || ||||||||||||||||| ||||||| |||||| Sbjct 893 GCTCCACTGCAAAAGACCCGAGGA-AAGAATCATTGGCAAAAGAATTGGAAGAGGAAGAA 951 Query 955 AACATTCTGAGACAATCTGTTGAGAAACTTAAATCTGTTGAAGAAAGTAGGACATCTCTC 1014 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 952 AACATTCTGAGACAATCTGTTGAGAAACTTAAATCTGTTGAAGAAAGTAGGACATCTCTC 1011 Query 1015 GTAAATTATCTTAGGGAAGCGCTACGCGAACAGGAATCTGAATTGGAGAATCTTCAATCT 1074 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1012 GTAAATCATCTTAGGGAAGCGCTACGGGAACAGGAATCTGAATTGGAGAATCTTCAATCT 1071 Query 1075 CAGATACAGGTAGCACAAGAACAAACTGAAGAAGCCCAAAACATGCAGAAACGGCTCAAT 1134 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1072 CAGATACAGGTAGCACAAGAACAAACCGAAGAAGCCCAAAACATGCAGAAACGGCTCAAT 1131 Query 1135 AACGAAACACCGGTTAACAATAACAACGGAACATCTGGTCAATCAGCGAAAATCACTCCT 1194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1132 AACGAAACACCGGTTAACAATAACAACGGAACATCTGGTCAATCAGCGAAAATCACTCCT 1191 Query 1195 GCCTCAATCGCTGCCATGGCGGAAATGCTAACTTCATCAACAAATTCATCAATGATTATG 1254 |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 1192 GCCTCAATCGCTGCAATGGCGGAAATGCTAACCTCATCAACAAACTCATCAATGATTATG 1251 Query 1255 CATTCTGTCCTGTCTTCATTTGCAGCTGAAGCTACACAGACTTCTGGTCTAACCAAATCA 1314 ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 1252 CATTCTGTCCTCTCTTCATTTGCAGCCGAAGCTACACAAACTTCTGGTCTAACCAAATCA 1311 Query 1315 AACAGCTCAGACACAAATGCATTTGTTGTTCCTCCAAATCCTCAGCAGTATCACATAATC 1374 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1312 AACACCTCAGACACAAATGCATTTGTTGTTCCTCCAAATCCTCAGCAGTATCACATAATA 1371 Query 1375 CCAAATCCAGCCGCATCGCAACAGTTTCTACCTTATGGGTTTGGTAACATTCCATTAATG 1434 ||||||||||||||||| |||||||||| | |||||| ||||||||||||||||||||| Sbjct 1372 CCAAATCCAGCCGCATCACAACAGTTTC--C-TTATGGATTTGGTAACATTCCATTAATG 1428 Query 1435 CCTCCTGGAGCACTTCCGCCACCGCC---TGGAGTGTTACCGCCGCATATGATGAGTAAT 1491 || ||||||||||| ||||||||||| |||| ||| |||||||||||||||| |||| Sbjct 1429 CCACCTGGAGCACTGCCGCCACCGCCGCCTGGAACGTTGCCGCCGCATATGATGAATAAT 1488 Query 1492 AATAATCAACCAAACGCAGCTCAGCAACAATCGCAACAACAAGGTCAGAGTTTTCAGCCA 1551 || || |||||||| ||||||||||||||| |||||||| |||||||||||||| ||| Sbjct 1489 AACAACCAACCAAATGCAGCTCAGCAACAAGCGCAACAA---GGTCAGAGTTTTCATCCA 1545 Query 1552 CCGGGTATGATGTATTTTGGACCTCCACACCATTCTTAAGGTTAGTaaaaaacaaataaa 1611 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 1546 CCGGGTATGATGTATTTTGGACCTCCACACCATTCTTAAGGTTAGTAAAAA-CAAACCAA 1604 Query 1612 aaaaTTCCAATTAGTTCTAGTTTTAGATAGTTTCTGACCCACTTTATTTTATTTGAATGT 1671 ||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||| Sbjct 1605 AAAAT-CCAATTAGTTCTAGTATTAGATAGTTTCTGACCCACTTTATTTTATTTCA-TGT 1662 Query 1672 AATGCAT-T-GTAGAAAATGGAAACGAGATCTTTTTTCTTACAAATCTTTGTACCTTGAG 1729 || |||| | ||||||| | ||||||||||||||| ||||||||||||| |||||||||| Sbjct 1663 AACGCATATTGTAGAAAGTAGAAACGAGATCTTTTGTCTTACAAATCTT-GTACCTTGAG 1721 Query 1730 CTGTTTAGTAAATTTTACTTCTTTGTAACATCATAGTTAGACTTATATTGTTTATCTGCT 1789 ||||||||| |||||| |||||||||||||| | ||||||||| |||||| ||||||| Sbjct 1722 CTGTTTAGTCAATTTTTCTTCTTTGTAACAT-A--GTTAGACTTCTATTGTGTATCTGCG 1778 Query 1790 TTACATTTATATTTAGTATGCATTTGTTTC 1819 |||||||||||| |||||||| |||||||| Sbjct 1779 TTACATTTATATCTAGTATGCGTTTGTTTC 1808 > AT5G10060.1 | Symbols: | ENTH/VHS family protein | chr5:3145749-3148379 REVERSE LENGTH=1985 Length=1985 Score = 785 bits (425), Expect = 0.0 Identities = 763/921 (83%), Gaps = 44/921 (5%) Strand=Plus/Plus Query 237 TTCTAGGGTTTTGATTTGA-TTTTGGGTTGGGATGAGTAGTCCGTTCAGTGAAGAGATAC 295 ||||||||||||| ||| |||| || ||||||||||||| ||||||||| |||| | Sbjct 304 TTCTAGGGTTTTG---TGAGTTTT-GG-TGGGATGAGTAGTGTGTTCAGTGATCAGATCC 358 Query 296 TGATTGATAAGCTCGCCAAGCTCAACAGCACTCAGCAATCCATCCAAACTCTGTCACAGT 355 |||||||||||||||| |||||||| |||| ||| || || ||| ||||||||||||| | Sbjct 359 TGATTGATAAGCTCGCTAAGCTCAATAGCAGTCAACAGTCTATCGAAACTCTGTCACATT 418 Query 356 GGTGTATAGTCCATCGTAGTGAAGCTGAGTTGGTTGTTACGACATGGGAGAAACAGTTTC 415 |||||||| || |||| || |||| || ||| | ||||||||||||||||||||||||| Sbjct 419 GGTGTATATTCAATCGGAGCAAAGCAGAATTGATCGTTACGACATGGGAGAAACAGTTTC 478 Query 416 ACAGTACAGAGATTGCTCAGAAAGTGCCTCTCTTGTACCTTG-CTAACGACATTCTTCAG 474 ||||||||||||| | ||||||||| ||||| ||||| ||| |||| || ||||||||| Sbjct 479 ACAGTACAGAGATGGATCAGAAAGTCCCTCTTTTGTAT-TTGGCTAATGATATTCTTCAG 537 Query 475 AACAGCAAGCGTCAGGGTAATGAGTTTGTGCAAGAGTTCTGGAAAGTTCTCCCTG-GTGC 533 ||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||| | || Sbjct 538 AACAGTAAGCGTCAAGGTAATGAGTTTGTGCAAGAGTTCTGGAATGTTCTTCCTAAG-GC 596 Query 534 TCTCAAAGATC-TTGTTTC-CTTGGGAGATGACTA-TGG-AAAAGGCGTTGTTTCACGAT 589 ||| ||||| | ||||||| | || |||||| || ||| ||||| || ||| |||| | Sbjct 597 TCTTAAAGA-CATTGTTTCTCAAGG-AGATGA-TAATGGCAAAAG-CGCTGTCGCACG-T 651 Query 590 -TGGTTAATATATGGGAAGAGAGAAGAGTCTTTGGGTCCCGTTCAAAGAGTCTTAAAGAT 648 || | || ||||||||||| |||||||| ||||| || ||||||||||||||||||||| Sbjct 652 GTGATCAAGATATGGGAAGAAAGAAGAGTGTTTGGATCACGTTCAAAGAGTCTTAAAGAT 711 Query 649 GTAATGCTCTC-AGAAGAAGCTCCTCCACCACTTGATGTCAGTAAAAAGCGAT-TACGGG 706 |||||||| | |||||| | ||||| ||||||||| |||| |||||||| | || | Sbjct 712 GTAATGCT-TGGAGAAGATGTTCCTCTGCCACTTGATATCAGCAAAAAGCGGCCT-CGCG 769 Query 707 GATCTAAATCTGCGAAACGAGATTCAAAATC-TGCCAAGAT-GAAATTAACA--AA-TGG 761 |||| |||||| | ||||| || |||||||| | ||| || ||||||| || || ||| Sbjct 770 GATCCAAATCTTCAAAACGGGAGTCAAAATCGT-CCA-GAACGAAATTAGCATCAAGTGG 827 Query 762 AGGTGTGACCGAGAAGATAGTATCTGCAT-TCAATTTGGTTAGT-GCAGAGAACTCAAAT 819 |||||| | |||||||||| ||| |||| ||| ||||||| || ||||| ||||||||| Sbjct 828 TGGTGTGGCTGAGAAGATAGCATCAGCATATCA-TTTGGTT-GTTGCAGAAAACTCAAAT 885 Query 820 GAAGA-GACAGAGATGAACAAATGCAAGTCTGCCGTTAGACGTATTAGAAAGATGGAGAA 878 ||||| | | |||||||| ||||| |||||||| |||| ||| || | ||||||||||| Sbjct 886 GAAGAAG-CTGAGATGAATAAATGTAAGTCTGCAGTTAAACGAATCCGGAAGATGGAGAA 944 Query 879 AGATGTTGAAGATGCCTGCTCCACTGCAAAAGAC--CC-GA-GTAGAAAATCATTGGCAA 934 |||||||||||| |||||||| |||||||||||| || || | |||||||| ||||| | Sbjct 945 AGATGTTGAAGAAGCCTGCTCTACTGCAAAAGACAACCCGAAG-AGAAAATCTTTGGCGA 1003 Query 935 AAGAACTGGAAGAAGAAGAAAACATTCTGAGACAATCTGTTGAGAAACTTAAATCTGTTG 994 ||||| |||||||||||||| || || ||||||||| | |||||||||||||||||||| Sbjct 1004 AAGAATTGGAAGAAGAAGAATACCTTTTGAGACAATGTATTGAGAAACTTAAATCTGTTC 1063 Query 995 AAGAAAGTAGGACATCTCTCGTAAATTATCTTAGGGAAGCGCTACGCGAACAGGAATCTG 1054 ||| |||||| | || || || || | |||| || || ||||| ||||||||||| | Sbjct 1064 AAGGAAGTAGAAGTTCCCTTGTGAACCAGCTTAAAGATGCACTACGTGAACAGGAATCCG 1123 Query 1055 AATTGGAGAATCTTCAATCTCAGATACAGGTAGC-ACAAGAACAAACTGAAGAAGCCCAA 1113 || |||| |||||| || ||||||| |||||||| | |||||||||| || ||||||||| Sbjct 1124 AACTGGACAATCTTAAAGCTCAGATTCAGGTAGCTA-AAGAACAAACAGAGGAAGCCCAA 1182 Query 1114 AACATGCAGAAACGGCTCAAT 1134 ||||||||||||||||| ||| Sbjct 1183 AACATGCAGAAACGGCTTAAT 1203 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 90009577185 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5