BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496802
Length=2111
Score E
Sequences producing significant alignments: (Bits) Value
AT5G65690.1 | Symbols: PCK2, PEPCK | phosphoenolpyruvate carbox... 3299 0.0
AT4G37870.1 | Symbols: PCK1, PEPCK | phosphoenolpyruvate carbox... 1064 0.0
> AT5G65690.1 | Symbols: PCK2, PEPCK | phosphoenolpyruvate carboxykinase
2 | chr5:26266340-26269616 FORWARD LENGTH=2176
Length=2176
Score = 3299 bits (1786), Expect = 0.0
Identities = 1984/2079 (95%), Gaps = 15/2079 (1%)
Strand=Plus/Plus
Query 1 TTAGTGGAAATGGCGGGAAAGGGAAACGAAAATACCGGTGGAGACTTCAGTTTCTCGGCT 60
||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct 25 TTAGTAGAAATGGCGGGAAACGGAAACGAAAGTACCGGTGGAGACTTCAGTTTCTCGGCT 84
Query 61 GCTGCGGCGCGTGATGCGCTTCCGAGGATCACGACAGAGAAGGGCGGCAAATCT--A--- 115
|| ||||| |||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 85 GCGGCGGCCCGTGATGCGCTTCCGAGGATCACGACTGAGAAGGGCGGCAAATCTCCAGGG 144
Query 116 ----CAGACGTGTGCCACGACGACACCGCACCGCGGGTCAACTTTCAGACCATCGACGAG 171
||||||| ||||| || |||| ||||||||||||||||||||||||||||||||||
Sbjct 145 CCGGCAGACGTCTGCCAGGATGACATCGCACCGCGGGTCAACTTTCAGACCATCGACGAG 204
Query 172 CTTCACAGTCTCCAGAGGAAACGATCTGCCCCGACCACTCCTCTTAGAGATGGCAGCGCC 231
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct 205 CTTCACAGTCTCCAGAAGAAACGATCTGCCCCTACCACTCCTCTTAGAGATGGCAGCGCC 264
Query 232 AGCGGAGTCAGCGGAACTAGTGGTCCGACCACTCCGGTCTCCAGCGAGACCATGCTTCAA 291
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 265 AGCGGAGTCAGCGGAACTAGTGGTCCGACTACTCCTGTCTCCAGCGAGACCATGCTTCAA 324
Query 292 TCCGTCAGTGCATCGTTGGCTTCGTTGACGAGAGAGACGGGACCGAAGTTAATAAGAGGA 351
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 325 TCCGTCAGTGCATCGTTGGCTTCGTTGACGAGAGAGACAGGACCGAAGTTAATAAGAGGA 384
Query 352 GATCCAACGTCGGCAGCGAAAGTGGCACACGTGCCAGTGACTCCTAGGTCACTTCCGACT 411
||||| || |||||||| ||||| |||||||||||||||||||||| |||||||||| ||
Sbjct 385 GATCCGACTTCGGCAGCTAAAGTAGCACACGTGCCAGTGACTCCTACGTCACTTCCGGCT 444
Query 412 GCTGACGTCAGCGACAGTGGCTTGAAGTTCACTCACATCCTTCACAACCTCTCTCCAGCC 471
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 445 GCTGACGTCAGCGACAGTGGCTTGAAGTTCACTCACATCCTTCACAACCTCTCTCCCGCC 504
Query 472 GAGTTGTACGAGCAGGCGATTAAGTATGAGAAAGGATCGTTTGTGACATCGACCGGTGCG 531
|||||||||||||| ||||| |||| |||||| |||||||||||||||||||||||||||
Sbjct 505 GAGTTGTACGAGCAAGCGATAAAGTTTGAGAAGGGATCGTTTGTGACATCGACCGGTGCG 564
Query 532 TTGGCTACATTGTCCGGAGCCAAAACCGGTCGGTCTCCTAAAGACAAGCGTGTGGTTAAG 591
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 565 TTGGCTACATTGTCTGGAGCCAAAACCGGTCGGTCTCCTAAAGACAAGCGTGTGGTTAAG 624
Query 592 GATGAGACCACTGAGGCCGAACTCTGGTGGGGGAAAGGATCACCAAACATTGAAATGGAT 651
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 625 GATGATACCACTGAGGCCGAACTCTGGTGGGGAAAAGGATCACCAAACATTGAAATGGAT 684
Query 652 GAGCAAACTTTTTTGGTGAACCGAGAGAGAGCTGTTGATTACTTAAACTCCTTGGACAAG 711
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 685 GAAAAAACTTTTTTGGTGAACCGAGAGAGAGCTGTTGATTACTTAAACTCCTTGGACAAG 744
Query 712 GTGTTTGTGAATGATCAATACCTAAACTGGGATCCAGAGAACAGAATCAAAGTGAGAATT 771
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 745 GTGTTTGTGAATGATCAATACCTAAACTGGGATCCAGAGAACAAAATCAAAGTGAGAATT 804
Query 772 GTTTCAGCTAGAGCTTACCATTCACTATTCATGCACAACATGTGTATCCGTCCAACACCT 831
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 805 GTTTCAGCAAGAGCTTACCATTCACTATTCATGCACAACATGTGTATCCGTCCAACACCT 864
Query 832 GAGGAGTTAGAGAATTTCGGGACACCCGATTTCACGATTTATAACGCGGGGAAATTCCCG 891
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 865 GAGGAGTTAGAGAATTTCGGGACACCCGATTTCACGATTTACAACGCGGGGAAATTCCCG 924
Query 892 TGTAACCGTTTCACTCATTACATGACATCTTCCACAAGTGTGGACATAAACCTAGGAAGA 951
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 925 TGTAACCGTTTCACTCATTACATGACATCTTCGACGAGTGTGGACATAAACCTAGGAAGA 984
Query 952 AGAGAGATGGTGATTCTAGGTACACAATATGCTGGAGAAATGAAGAAAGGACTCTTTGGT 1011
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 985 AGAGAGATGGTGATTCTAGGTACCCAATATGCTGGAGAAATGAAGAAAGGACTCTTTGGT 1044
Query 1012 GTGATGCATTATTTGATGCCTAAGAGAAAGATTTTGTCACTTCACTCTGGTTGTAACATG 1071
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1045 GTGATGCATTATTTGATGCCTAAGAGAAAGATTTTGTCTCTTCACTCTGGTTGTAACATG 1104
Query 1072 GGAAAAGATGGAGATGTTGCTCTCTTTTTCGGACTTTCTGGAACCGGAAAGACTACATTG 1131
|| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct 1105 GGCAAAGATGGAGATGTTGCTCTCTTTTTCGGACTCTCTGGTACCGGAAAGACTACGTTG 1164
Query 1132 TCGACTGATCATAACCGATATTTGATCGGAGATGATGAACATTGTTGGAGTGAGACTGGA 1191
|||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 1165 TCGACTGACCATAACCGGTATTTGATCGGAGATGATGAACATTGTTGGAGTGAGGCTGGA 1224
Query 1192 GTTTCGAATATCGAAGGTGGTTGTTACGCGAAATGCATTGATTTGGCAAGGGAGAAAGAG 1251
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1225 GTTTCGAATATCGAAGGTGGTTGTTACGCGAAATGCATTGATTTGGCTAGGGACAAAGAG 1284
Query 1252 CCTGATATCTGGAACGCTATCAAGTTTGGAACCGTTTTGGAGAATGTTGTGTTTGATGAG 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1285 CCTGATATCTGGAACGCTATCAAGTTTGGAACCGTTTTGGAGAATGTTGTGTTTGATGAG 1344
Query 1312 CATACACGAGAAGTGGATTACACAGACAAATCGGTGACGGAGAACACACGTGCAGCTTAT 1371
||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||
Sbjct 1345 CATACACGAGAAGTGGATTACACTGACAAATCAGTGACGGAGAACACACGTGCGGCTTAT 1404
Query 1372 CCGATTGAGTACATTCCGAACTCGAAGATTCCGTGCGTTGGACCACACCCGAAGAACGTG 1431
||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1405 CCGATAGAGTACATTCCAAACTCGAAGATACCGTGCGTTGGACCACACCCGAAGAACGTG 1464
Query 1432 ATCCTGTTGGCTTGTGACGCCTTTGGTGTGTTGCCACCAATCAGCAAGCTCAATCTTGCT 1491
||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1465 ATCCTATTGGCTTGTGACGCCTTCGGTGTGTTGCCGCCAATCAGCAAGCTCAATCTTGCT 1524
Query 1492 CAGACTATGTACCATTTCATCAGTGGCTACACTGCTCTCGTTGCAGGAACAGAGGAAGGA 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1525 CAGACTATGTACCATTTCATCAGTGGCTACACTGCTCTCGTTGCAGGAACAGAGGAAGGA 1584
Query 1552 GTTAAGGAACCTCGAGCAACATTCTCGGCTTGTTTCGGTGCTGCTTTCATTATGCTTCAC 1611
||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||
Sbjct 1585 GTTAAGGAACCTCGAGCGACATTCTCAGCTTGTTTTGGTGCTGCTTTCATTATGCTACAC 1644
Query 1612 CCAACCAAGTATGCTGCTATGTTGGCTGAGAAAATGCAGGCTCAAGGAGCCACCGGTTGG 1671
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1645 CCAACCAAGTACGCTGCTATGTTGGCTGAGAAAATGCAGGCTCAAGGAGCCACCGGTTGG 1704
Query 1672 CTTGTTAACACTGGATGGTCCGGTGGAAGCTATGGATCTGGAAGTAGAATCAAGTTGGCG 1731
||||||||||| || ||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct 1705 CTTGTTAACACCGGTTGGTCCGGTGGAAGCTACGGAACTGGAAGCCGAATCAAGTTGGCG 1764
Query 1732 TACACACGAAAGATTATCGATGCTATACATTCGGGTAGTCT-CTTGAATGCATCTTACCG 1790
|| ||||||||||| |||||||||||||||||||||||||| | |||||||| ||||||
Sbjct 1765 TATACACGAAAGATAATCGATGCTATACATTCGGGTAGTCTAC-TGAATGCAAGTTACCG 1823
Query 1791 AAAAACAGATATTTTTGGTTTGGAAATTCCAAATGAAGTTGAAGGAGTTCCTTCTGAGAT 1850
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1824 TAAAACAGATATTTTTGGTTTGGAGATTCCAAATGAAGTAGAAGGAGTTCCTTCTGAGAT 1883
Query 1851 ACTGGAACCTATTAATGCCTGGGAAGACAAAATGGCTTATGAGGACACATTGTTGAAACT 1910
|||||||||||||||||| ||| || |||||||||||||||||||||||||||||| |
Sbjct 1884 ACTGGAACCTATTAATGCATGGCCTGATAAAATGGCTTATGAGGACACATTGTTGAAATT 1943
Query 1911 GGCTGGTTTGTTTAAAAGCAATTTTGAGACATTCACAAGTCATAAGATTGGTGATGATGG 1970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1944 GGCTGGTTTGTTTAAAAGCAATTTTGAGACATTCACAAGTCATAAGATTGGTGATGATGG 2003
Query 1971 AAAATTGACTGAAGAGATTCTTGCAGCTGGTCCTAACTTCTAA-GTGATTGAAGATGATG 2029
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2004 AAAATTGACTGAAGAGATTCTTGCAGCTGGTCCTAACTTCTAAAGTGATTGAAGATGATG 2063
Query 2030 ATGAAAAACAAACCTTTTT-CTCCAACCAAAATAAGACT 2067
||||||||||||||||||| || |||||||||||||||
Sbjct 2064 ATGAAAAACAAACCTTTTTACT--AACCAAAATAAGACT 2100
> AT4G37870.1 | Symbols: PCK1, PEPCK | phosphoenolpyruvate carboxykinase
1 | chr4:17802694-17806539 REVERSE LENGTH=2413
Length=2413
Score = 1064 bits (576), Expect = 0.0
Identities = 1284/1618 (79%), Gaps = 80/1618 (5%)
Strand=Plus/Plus
Query 432 CTTGAAGTTCACTCACATCCTTC-ACAACCTCTCTCCAGCCGAG-TTGTACGAGCAGGCG 489
||||||||| |||||| ||| || |||| || || || || ||| || || ||||| ||
Sbjct 552 CTTGAAGTTTACTCACGTCC-TCTACAATCTTTCGCCTGCAGAGCTT-TATGAGCAAGCT 609
Query 490 ATTAAGTATGAGAAAGGATCGTTTGTGACATCGACCGGTGCGTTGGCTAC-ATTGTCCGG 548
||||||||||||||||| |||||| | || || | || || ||||| || || || ||
Sbjct 610 ATTAAGTATGAGAAAGGTTCGTTTATCACTTCTAATGGAGCTTTGGCGACGCTT-TCTGG 668
Query 549 AGCCAAAACCGGTCGGT-CTCCTAAAGACAAGCGTGTGGTTAAG-GATGAGACCACTGAG 606
|| || || |||| || |||| | ||| |||||||| ||| || |||| || ||||||
Sbjct 669 TGCTAAGACTGGTC-GTGCTCCCAGAGATAAGCGTGTTGTT-AGAGATGCTACTACTGAG 726
Query 607 GCCGAACTCTGGTGGGGGAAA-GGATCACCAAACATTGAAATGGATGAGCAAACTTTTTT 665
| || || |||| ||||||| || || || || || ||||||||||| || ||||| |
Sbjct 727 GATGAGCTTTGGT-GGGGAAAGGGTTCGCCGAATATCGAAATGGATGAACATACTTTCAT 785
Query 666 GGTGAACCGAGAGAGAGCTGTTGATTACTTAAACTCCTTGGACAAGGTGTTTGTGAATGA 725
||||||| |||| ||||||||||||||||| || |||||||| ||||| ||||| |||||
Sbjct 786 GGTGAACAGAGAAAGAGCTGTTGATTACTTGAATTCCTTGGAAAAGGTCTTTGTCAATGA 845
Query 726 TCAATACCTAAACTGGGATCCAGAGAACAGAATCAAAGTGAGAATTGTTTCAGCTAGAGC 785
|||||| ||||||||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct 846 CCAATACTTAAACTGGGATCCAGAGAACAGAATCAAAGTCAGGATTGTCTCAGCTAGAGC 905
Query 786 TTACCATTCACTATTCATGCACAACATGTGTATCCGTCCAACACCTGAGGAG-TTAGAGA 844
|||||||||| | || |||||||||||||||||||| ||||| | |||||| || ||||
Sbjct 906 TTACCATTCATTGTTTATGCACAACATGTGTATCCGACCAACTCAGGAGGAGCTT-GAGA 964
Query 845 -ATTTCGGGACACCCGATTTCACGATTTATAACGCGGGGAAATTCCCGTGTAACCGTTTC 903
||| || || || ||||| || || || || || ||| | || || ||||| |||| |
Sbjct 965 GCTTT-GGTACTCCGGATTTTACTATATACAATGCTGGGCAGTTTCCATGTAATCGTTAC 1023
Query 904 ACTCATTACATGACATCTTCCACAAGTGTGGACATAAACCTAGG-AAGAAGAGAGATGGT 962
|||||||||||||| || ||||| || || ||| | || || || || || || |||||
Sbjct 1024 ACTCATTACATGACTTCGTCCACTAGCGTAGACCTTAATCT-GGCTAGGAGGGAAATGGT 1082
Query 963 GATTCTAGGTACACAATATGCTGGAGAAATGAAGAAAGGACTCTTT-GGTGTGATGCATT 1021
|| || ||||| || |||||||| ||||||||||| || || ||| ||||||||||||
Sbjct 1083 TATACTTGGTACTCAGTATGCTGGGGAAATGAAGAAGGGTCT-TTTCAGTGTGATGCATT 1141
Query 1022 A-TTTGATGCCTAAGAGAAAG-ATTTTGTCACTTCACTCTGGTTGTAACATGGGAAAAGA 1079
| || ||||||||| | | ||| | || ||||| ||||| || || |||||||||||
Sbjct 1142 ACCTT-ATGCCTAAGCG-TCGTATTCTCTCCCTTCATTCTGGATGCAATATGGGAAAAGA 1199
Query 1080 TGGAGATGTTGCTCTCTT-TTTCGGACTTTCTGGAACCGGAAAGACTACATTGTCGACTG 1138
|||||||||||||||||| ||| |||||||| || ||||| ||||| || |||| ||||
Sbjct 1200 TGGAGATGTTGCTCTCTTCTTT-GGACTTTCAGGTACCGGGAAGACAACGCTGTCTACTG 1258
Query 1139 ATCATAACCGATAT-TTGATCGGAGATGATGAACATTGTTGGAGTGAGACTGGAGTTTCG 1197
|||| ||| | ||| || || ||||||||||| |||||||||| ||||||||| ||||||
Sbjct 1259 ATCACAACAGGTATCTT-ATTGGAGATGATGAGCATTGTTGGACTGAGACTGGTGTTTCG 1317
Query 1198 AATATCGAAGGTGGTTGTTACGCGAAATGCATTGAT-TTGGCAAGGGAGAAAGAGCCTGA 1256
|| || || ||||| || || || || || ||||| || | |||||||| ||||||||
Sbjct 1318 AACATTGAGGGTGGGTGCTATGCTAAGTGTGTTGATCTT-TCGAGGGAGAAGGAGCCTGA 1376
Query 1257 TATCTGGAACGCTATCAAGTTTGGAACCGTTTTGGAGAATGTTGTGTTTGATGAGCATAC 1316
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct 1377 TATCTGGAACGCTATCAAGTTTGGAACAGTTTTGGAAAATGTTGTGTTTGATGAGCACAC 1436
Query 1317 -ACGAGAAGTGGATTACACAGACAAATCGGTGACGGAGAACACACGTGCAGCTTATCCGA 1375
| |||||||||||||| | || ||||| || || |||||||||||||| || || || |
Sbjct 1437 CA-GAGAAGTGGATTACTCTGATAAATCTGTTACAGAGAACACACGTGCTGCCTACCCAA 1495
Query 1376 TTGAGTACATTCCGAACT-CGAAGATTCCGTGCGTTGGACCACACCCGA-AGAACGTGAT 1433
|||||| |||||| || | |||| || || || ||||| |||||||||| | || |||||
Sbjct 1496 TTGAGTTCATTCCAAA-TGCGAAAATACCTTGTGTTGGTCCACACCCGACA-AATGTGAT 1553
Query 1434 CCTGT-TGGCTTGTGACGCCTTTGGTGTGT-TGCCACCAATCAGCAAGCTCAATCTTGCT 1491
|| | |||||||||| ||||||||||| | | ||||| | |||||||| ||||| ||
Sbjct 1554 ACT-TCTGGCTTGTGATGCCTTTGGTGT-TCTCCCACCTGTGAGCAAGCTGAATCTGGCA 1611
Query 1492 CAGACTATGTACCATTTCATCAGTGGCTACACTGCTCTCGTTGCAGGAACAGAGGAAGG- 1550
|| || |||||||| ||||||||||| ||||||||||| ||||| || |||||||| ||
Sbjct 1612 CAAACCATGTACCACTTCATCAGTGGTTACACTGCTCTGGTTGCTGGCACAGAGGATGGT 1671
Query 1551 AGTTAAGGAACCT-CGAGCAACATTCTCGGCTTG-TTTCGGTGCTGCTTTCATTATGCTT 1608
| | ||||| || | |||||||||||| ||||| ||| ||||| |||||||| ||| ||
Sbjct 1672 A-TCAAGGAGCCAAC-AGCAACATTCTCAGCTTGCTTT-GGTGCAGCTTTCATAATG-TT 1727
Query 1609 -CA-CCCAACCAAGTATGCTGCTATGTTGGCTGAGAAAATGCAGGCTCAAGGAGCCACCG 1666
|| |||| | |||||||| |||||||| |||||||| ||| || | ||||| || || |
Sbjct 1728 GCATCCCA-CAAAGTATGCAGCTATGTTAGCTGAGAAGATGAAGTCACAAGGTGCTACTG 1786
Query 1667 GTTGGCTTGTTAACACTGGATGGTCCGGTGGAAGCTATGGATCT-GGAAGTAGAATCAAG 1725
||||||| || |||||||| ||||| ||||| || ||||| | | |||| |||||||||
Sbjct 1787 GTTGGCTCGTCAACACTGGTTGGTCTGGTGGCAGTTATGG-TGTTGGAAACAGAATCAAG 1845
Query 1726 TTGGCGTACAC-ACGAAAGATTATCGATGCTATACATTCGGGTAGTCTCTTGAATGCAT- 1783
|||| ||||| | ||||||| |||||||| || |||||||| ||||||||||| |||
Sbjct 1846 CTGGCATACACTA-GAAAGATCATCGATGCAATCCATTCGGGCAGTCTCTTGAAGGCAAA 1904
Query 1784 CTTACC-GAAAAACAGATATTTTTGG-TTTGGAAATTCCAAATGAAGTT-GAAGGAGTT- 1839
|| || ||||| | || || ||||| |||| |||| |||| ||| | | ||||| | |
Sbjct 1905 CT-ACAAGAAAACC-GAAATCTTTGGATTTG-AAATCCCAACTGA-GATCGAAGG-GATA 1959
Query 1840 CCTTCTGAGATACT-GGAACCTATTAA-TGCCTGGGAAGACAA-AATGGCTTATGAGGAC 1896
||||| ||||| || ||| || | || | ||||| || || || ||| | | ||
Sbjct 1960 CCTTCAGAGAT-CTTGGACCCCGTCAACT-CCTGGTCTGATAAGAA-GGCACACAAAGAT 2016
Query 1897 ACAT-TGTTGAAACTGGCTGGTTTGTTTAA-AAGCAATTTTGAGACATTCAC-AAGTCAT 1953
|| | || ||||||||| ||| |||| || ||| || || ||| || | || |||
Sbjct 2017 AC-TCTGGTGAAACTGGGAGGTCTGTTCAAGAAG-AACTTCGAGGTTTTTGCTAAC-CAT 2073
Query 1954 AAGATTGGTGATG-ATGGAAAA-TTGACTGAAGAGATTCTTGCAGCTGGTCCTAACTT 2009
|||||||||| || |||| || || || || |||||||| || |||||||||| |||
Sbjct 2074 AAGATTGGTG-TGGATGGTAAGCTT-ACGGAGGAGATTCTCGCTGCTGGTCCTATCTT 2129
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104668136325
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5