BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496818
Length=1917
Score E
Sequences producing significant alignments: (Bits) Value
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superf... 2856 0.0
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 1461 0.0
> AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:26339876-26341789 REVERSE LENGTH=1914
Length=1914
Score = 2856 bits (1546), Expect = 0.0
Identities = 1801/1924 (94%), Gaps = 17/1924 (1%)
Strand=Plus/Plus
Query 1 ATGCTACCGTTTAC--GA-TGATGCATAGATTCTCTCCCATAGTCGAGTTT-TATCTTAG 56
|||||||||||||| || ||||||||||||||||||||||||||||||| | ||||||
Sbjct 1 ATGCTACCGTTTACGAGAGAGATGCATAGATTCTCTCCCATAGTCGAGTTTCT-TCTTAG 59
Query 57 CAAACGTCAATTTTTCTTACTTTCTTCTCAATTCAAGTCTCGCTTTGACTTGATTCACAG 116
|||||| ||| ||||||||| || ||||||||| |||||||||||||||||||||||| |
Sbjct 60 CAAACGCCAAATTTTCTTACATTATTCTCAATTTAAGTCTCGCTTTGACTTGATTCACCG 119
Query 117 AAGTTTTCACGTTTCTAGAGCTCTCGAAGATAATTTCCGGAGAAG-AAGAGGGATTGGCT 175
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 120 AAGTTTTCACGTTTCTAGAGCTCTCGAAGATAATTTCCGGAGAAGTAA-CGGGATTGGCT 178
Query 176 TAGTTTGTCTCGAGAAGAGCCACAACCACAACGATCGTACGAAAAACTCCAAGTACGATG 235
||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||
Sbjct 179 TAGTTTGTCTCGAGAAGAG------CCACAACGATCGCACGAAAAACTCCAAGTATGATG 232
Query 236 AATTCGCGAGTGATGTCGAAAAAGCCTACAGGATTTTGCGGAAATTTCATTCCAGGGTTC 295
||||||||||||||||||| ||| | ||||| ||| |||||||||||||||| |||||||
Sbjct 233 AATTCGCGAGTGATGTCGAGAAATCATACAGAATTCTGCGGAAATTTCATTCTAGGGTTC 292
Query 296 CGAAGTTGGAACTCGCGCTTAACGAATCCGGTGTTGAACTCCGACCCGGGTTAATCGAAC 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 293 CGAAGTTGGAACTCGCGCTTAACGAATCCGGTGTTGAACTCCGACCCGGGTTAATCGAAC 352
Query 356 GGGTTCTGAATCGTTGTGGGGATGCTGGGAATCTAGGTTACAGATTCTTCGTCTGGGCGG 415
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 353 GGGTTTTGAATCGTTGTGGAGATGCTGGGAATCTAGGTTACAGATTCTTCGTCTGGGCGG 412
Query 416 CGAAGCAACCTCGTTATTGTCACAGCATCGAAGTGTATAAATCAATGGTGAAAATTCTAA 475
||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |
Sbjct 413 CGAAGCAACCTCGTTATTGTCACAGTATCGAAGTGTATAAGTCAATGGTGAAGATTCTTA 472
Query 476 GTAAGATGCGTCAATTTGGAGCTGTTTGGGGTTTAATCGAAGAAATGAGGAAGGAGAATC 535
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 473 GTAAAATGCGTCAATTTGGAGCTGTTTGGGGTTTAATTGAAGAAATGAGGAAGGAGAATC 532
Query 536 CGCAGTTGATTGAACCGGAATTGTTTGTTGTTTTGGTTCAGAGGTTTGCCTCTGCGGATA 595
|||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||
Sbjct 533 CGCAGTTGATTGAACCGGAATTGTTTGTGGTTTTGGTTCAGAGATTTGCGTCTGCGGATA 592
Query 596 TGGTGAAGAAAGCCATTGAGGTGCTCGACGAAATGCCTAAGTTTGGTTTAGAGCCAGACG 655
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
Sbjct 593 TGGTGAAGAAAGCCATTGAGGTGCTCGACGAAATGCCTAAGTTCGGTTTTGAGCCAGATG 652
Query 656 AGTATGTATTCGGGTGTTTGCTAGATGCGTTGTGTAAGCACGGTAGCGTTAAGGATGCTG 715
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 653 AGTATGTATTCGGGTGTTTGCTAGATGCATTGTGTAAGCACGGTAGTGTTAAGGATGCTG 712
Query 716 CAAAGCTTTTCGAGGATATGAGATTGCGGTTTCCGGTGAATTTGAGATATTTTACTTCGT 775
|||||||||| |||||||||||| |||||||||||||||||||| | |||||||||||||
Sbjct 713 CAAAGCTTTTTGAGGATATGAGAATGCGGTTTCCGGTGAATTTGCGGTATTTTACTTCGT 772
Query 776 TGTTGTATGGTTGGTGCAGGGAAGGGAAGATGATGGAGGCTAAATATGTTTTGGTTCAGA 835
||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |
Sbjct 773 TGTTGTATGGTTGGTGCAGGGTAGGGAAGATGATGGAAGCTAAATATGTTTTGGTTCAAA 832
Query 836 TGAAGGAAGCTGGGTTTGAGCCAGATGTTGTTGATTACACCAACTTGTTAAGTGGGTATG 895
|||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||
Sbjct 833 TGAACGAAGCTGGGTTTGAGCCAGACATTGTTGATTACACTAACTTGCTAAGTGGATATG 892
Query 896 CTAATGCTGGTAAAATGGCTGATGCTTATGATCTTTTGAAAGATATGAGAAGAAGAGGGT 955
||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
Sbjct 893 CTAATGCTGGTAAAATGGCAGATGCTTATGATCTTTTGAGAGATATGAGAAGAAGAGGCT 952
Query 956 TTGAACCGAATGC-AACTTGCTACACGGTTTTGATTCAAGCATTGTGTAAGGTAGATAGA 1014
||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 953 TTGAACCGAATGCGAAC-TGTTACACGGTTTTGATTCAAGCATTGTGTAAGGTAGATAGA 1011
Query 1015 ATGGAGGAGGCAATGAAGGTATTTGTTGAGATGGAGAGGTATGAATGCGAGGCTGATGTT 1074
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1012 ATGGAGGAGGCAATGAAGGTATTTGTTGAGATGGAGAGGTATGAATGTGAGGCTGATGTT 1071
Query 1075 GTGACTTACACTGCATTGGTTAGTGGGTTTTGCAAATGGGGAAAGATCGATAAGTGTTAT 1134
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1072 GTGACTTACACTGCATTAGTTAGTGGGTTTTGCAAATGGGGAAAGATCGATAAATGTTAT 1131
Query 1135 CTAGTTTTAGACGATATGATAAAAAAGGGGCTCATGCCTTCTCAACCCACCTATATGCAT 1194
| ||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||
Sbjct 1132 ATTGTTTTAGACGATATGATAAAAAAAGGGCTCATGCCGTCTGAACTCACCTATATGCAT 1191
Query 1195 ATCATGGCAGCTCATGAGAAAAAGGAAAAACTTGTAGAGTGTTTGGAGCTGATGGAGAAG 1254
|| |||| ||||||||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct 1192 ATAATGGTGGCTCATGAGAAGAAGGAAAGTTTTGAAGAGTGTTTGGAGCTGATGGAGAAG 1251
Query 1255 ATGAAGCAGATAGAGTATCATCCCGATATTGGCATTTACAATGTCGTCATCAGATTGGCT 1314
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1252 ATGAGGCAAATAGAGTATCATCCTGATATTGGCATTTACAATGTCGTCATCAGATTGGCT 1311
Query 1315 TGTAAATTGGGAGAAGTAAAGGAAGCTGTTAGATTATGGAACGAAATGGAAGGGAACGGT 1374
||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1312 TGTAAGTTGGGAGAAGTAAAGGAAGCTGTTAGATTATGGAACGAAATGGAAGAAAACGGT 1371
Query 1375 TTGAGTCCTGGAGCAGATACGTTTGTTATTATTATCAATGGATTAACAAGCCAAGGTTGT 1434
||||||||||||| |||||||||||| || || |||||||||||| ||||||||||||||
Sbjct 1372 TTGAGTCCTGGAGTAGATACGTTTGTCATAATGATCAATGGATTAGCAAGCCAAGGTTGT 1431
Query 1435 TTACTCGAAGCCTGTGATCACTTTAAAGAAATGGTAGCTCGAGGATTGTTCTCCGTTCCT 1494
||||||||||| |||||||||| |||||||||||| |||||||| ||||||| ||| ||
Sbjct 1432 TTACTCGAAGCGAGTGATCACTTCAAAGAAATGGTAACTCGAGGACTGTTCTCTGTTTCT 1491
Query 1495 CAATACGGAACTCTGAAGTTATTGCTAAATACCCTTTTAAAAGACAAGAAGCTCGAAATG 1554
||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 1492 CAATATGGAACTCTGAAGTTATTGCTAAATACCGTTTTAAAAGACAAGAAGCTTGAAATG 1551
Query 1555 GCAAAAGATGTTTGGAGTTGCATCACAAGTAAAGGCT-CTTGCGAGCTGAGTGTATCATC 1613
|| ||||||||||||||||| |||||||||||||| | |||||||||||| ||||| |||
Sbjct 1552 GCGAAAGATGTTTGGAGTTGTATCACAAGTAAAGG-TGCTTGCGAGCTGAATGTATTATC 1610
Query 1614 GTGGACAATATGGATCCATGCCTTGTTCTCAAAAGGTTATGAAAAGGAGGCTTGTTCTTA 1673
|||||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct 1611 TTGGACAATATGGATACATGCCTTGTTCTCAAAAGGCTATGAAAAGGAAGCGTGTTCTTA 1670
Query 1674 TTGTCTTGAAATGATAGAGATGGAGTTCATGCCACAACCAGACACATTTGCTAAACTTAT 1733
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1671 TTGTATTGAAATGATAGAGATGGACTTCATGCCACAACCAGACACATTTGCTAAACTTAT 1730
Query 1734 CAAGGGATTGAAGAAATTGTATCATAGAGAATTCGCTGTAGAGATTACAGAGAAAGTGAG 1793
||||| ||||||||||||||| |||||||||| |||| ||||||||||||||| |||||
Sbjct 1731 GAAGGGTTTGAAGAAATTGTATAATAGAGAATTTGCTGGAGAGATTACAGAGAAGGTGAG 1790
Query 1794 GAATATGGCAGCTGAGAGAGAGATGAGTTTTAAGATGTATAAGAGAAGAGGAGTGCAAGA 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1791 GAATATGGCAGCTGAGAGAGAGATGAGTTTTAAGATGTATAAGAGAAGAGGAGTGCAAGA 1850
Query 1854 TTTGACTGAGAAAGCTAAATCTAAACAAGATAGAGAAGGGAAGAAGAAGCAGAGGACTCG 1913
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 1851 TTTGACTGAGAAAGCTAAATCTAAACAAGATAGAGAAGGGAAGAAGAAACAGAGGAGTCG 1910
Query 1914 ATAA 1917
||||
Sbjct 1911 ATAA 1914
> AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE LENGTH=1917
Length=1917
Score = 1461 bits (791), Expect = 0.0
Identities = 1416/1710 (83%), Gaps = 74/1710 (4%)
Strand=Plus/Plus
Query 232 GATGAATTCG-CGAGTGATGTCGAAAAAG-CCTACAGGATTTTGCGGAAAT-TTCATTCC 288
|||||||||| || |||| |||| | ||| ||||| ||||||||| ||| |||||
Sbjct 181 GATGAATTCGCCG-GTGAAGTCG-AGAAGATTTACAGAATTTTGCGG-AATCACCATTCT 237
Query 289 AGGGTTCCGAAGTTGGAACTCGCGCTTAACGAATCCGGTGTTGAACTCCGACCCGGGTTA 348
|| ||||| || ||||| || || ||||||||||| ||| |||| || |||||||||||
Sbjct 238 AGAGTTCCAAAATTGGAGCTTGCTCTTAACGAATCAGGTATTGATCTGCGACCCGGGTTG 297
Query 349 ATCGA-ACGGGT-TCTGAATCGTTGTGGGGATGCTGGGAATCTAGGTTACAGATTC-TTC 405
||| | ||| || | ||| ||||||||| |||||||||||||||||||| |||||| |||
Sbjct 298 ATC-ATACGAGTGT-TGAGTCGTTGTGGCGATGCTGGGAATCTAGGTTATAGATTCTTTC 355
Query 406 GTCTGGGCGGCGAAGCAACCTCGTTATTGTCACAGC-ATCGAAGTGTATAAATCAATGGT 464
| ||||| ||||||||||| |||||| ||| ||| || ||||||| ||||||||||||
Sbjct 356 -TGTGGGCAACGAAGCAACCTGGTTATTTTCATAGCTAT-GAAGTGTGTAAATCAATGGT 413
Query 465 GAAAATTCTAAGTAAGATGCGTCAATTTGGAGCTGTTTGGGGTTTAATCGAAGAAATGAG 524
|| ||||| ||||| ||||| |||||||||||||||||||||||||| ||||| |||||
Sbjct 414 GATGATTCTTAGTAAAATGCGACAATTTGGAGCTGTTTGGGGTTTAATTGAAGAGATGAG 473
Query 525 GAAGGA-GAATCCGCAGTTGATTGAACCGGAATTGTTTGTTGTTTTGGTTCAGAGGTTTG 583
||| || ||||||| |||||||||| ||||| ||||| ||||| ||| | | ||||||||
Sbjct 474 GAA-GACGAATCCGGAGTTGATTGAGCCGGAGTTGTTCGTTGTATTGATGCGGAGGTTTG 532
Query 584 CCTCTGCGGATATGGTGAAGAAAGCCA-TTGAGGTGCTCGACGAAATGCCTAAGTTTGGT 642
| ||||| | ||||||||||||| || ||||||||||||||||||||||||||| |||
Sbjct 533 CTTCTGCTAACATGGTGAAGAAAG-CAGTTGAGGTGCTCGACGAAATGCCTAAGTATGGG 591
Query 643 TTAGAGCCAGACGAGTATGTATTCGGGTGTTTGCTAGATGCGTTGTGTAAGCACGGTAGC 702
|||||||| ||||||||||| || || |||||| ||||||| ||||||||| |||||||
Sbjct 592 TTAGAGCCTGACGAGTATGTTTTTGGTTGTTTGTTAGATGCTTTGTGTAAGAACGGTAGT 651
Query 703 GTTAAGGATGCTGCAAAGCTTTTCGAGGATATGAGATTGCGGTTTCCGGTGAATTTGAGA 762
|||||||| ||| ||||| |||| |||||||||||| | |||||| ||||||| |
Sbjct 652 GTTAAGGAGGCTTCAAAGGTTTTTGAGGATATGAGAGAGAAGTTTCCTCCGAATTTGCGG 711
Query 763 TATTTTACTTCGTTGTTGTATGGTTGGTGCAGGGAAGGGAAGATGATGGAGGCTAAATAT 822
||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| |
Sbjct 712 TATTTTACTTCGTTGTTGTATGGTTGGTGTAGGGAAGGGAAGTTGATGGAAGCTAAAGAA 771
Query 823 GTTTTGGTTCAGATGAAGGAAGCTGGGTTTGAGCCAGATGTTGTTGATTACACCAACTT- 881
||||||||||||||||||||||||||| ||||||| || |||| | || ||| |||||
Sbjct 772 GTTTTGGTTCAGATGAAGGAAGCTGGGCTTGAGCCTGACATTGTGGTTTTCACTAACTTA 831
Query 882 GTTAAGTGGGTATGCTAATGCTGGTAAAATGGCTGATGCTTATGATCTTTTGAAAGATAT 941
|| ||||| |||||| ||||||| |||||||| ||||| ||||||||| |||| |||||
Sbjct 832 CTT-AGTGGATATGCTCATGCTGGGAAAATGGCGGATGCGTATGATCTTATGAATGATAT 890
Query 942 GAG-AAGAAGAGGGTTTGAACCGAATG-CAACTTGCTACACGGTTTTGATTCAAGCATTG 999
||| ||| ||||||||||| ||||||| || ||| |||||||||||||| || || |||
Sbjct 891 GAGAAAG-AGAGGGTTTGAGCCGAATGTGAA-TTGTTACACGGTTTTGATCCAGGCGTTG 948
Query 1000 TGTA--A-GGTAG-ATAGAATGGAGGAGGCAATGAAGGTATTTGTTGAGATGGAGAGGTA 1055
|||| | || || | |||||||| ||||| ||| ||| ||||||||||||||||||||
Sbjct 949 TGTAGGACGG-AGAAGAGAATGGATGAGGCGATGCGGGTTTTTGTTGAGATGGAGAGGTA 1007
Query 1056 TGAATGCGAGGCTGATGTTGTGACTTACACTGCATTGGTTAGTGGGTTTTGCAAATGGGG 1115
|| ||| ||||||||| |||||||||| || || ||| | ||||||||||| ||||||||
Sbjct 1008 TGGATGTGAGGCTGATATTGTGACTTATACCGCGTTGATAAGTGGGTTTTGTAAATGGGG 1067
Query 1116 AAAGATCGAT-AAGTGTTAT-CTAGTTTTAGACGATATGATAAA-AAAGGGGCTCATGCC 1172
|| ||| ||| ||| ||||| | |||||||| ||||||| ||| ||||| | |||||||
Sbjct 1068 AATGATTGATAAAG-GTTATAGT-GTTTTAGATGATATGAGAAAGAAAGGAG-TCATGCC 1124
Query 1173 TTCTCAACCCACCTATATGCATATCATGGCAGCTCATGAGAA-AAAGGAAAAACTTGTAG 1231
|| ||| || |||||||| || |||| ||||||||||| ||| ||| || ||| ||
Sbjct 1125 GTCGCAAGTAACATATATGCAGATAATGGTGGCTCATGAGAAGAAA-GAACAATTTGAAG 1183
Query 1232 AGTGTTTGGAGCTGATGGAGAAGATGAAGCAGATAGA-G-TATCATCCCGATATTGGCAT 1289
||||||||||| |||| ||||||||||||| || ||| | | |||||| ||| || |||
Sbjct 1184 AGTGTTTGGAGTTGATTGAGAAGATGAAGC-GA-AGAGGTTGTCATCCTGATCTTCTCAT 1241
Query 1290 TTACAATGTCGTCATCAGATTGGCTTGTAAATT-GGGAGAAGT-AAAGGAAGCTGTTAGA 1347
||||||||| || || |||||||||||||| || ||| ||||| ||| ||||||||| |
Sbjct 1242 TTACAATGTAGTGATAAGATTGGCTTGTAAGTTAGGG-GAAGTGAAA-GAAGCTGTTCGG 1299
Query 1348 TTATGGAACGAAATGGAAGGGAACGGTTTGAGTCCTGGAGCAGATACGTTTGTTATTATT 1407
||||||||||||||||||| || || | || ||||||| |||||||||||||||||
Sbjct 1300 TTATGGAACGAAATGGAAGCTAATGGGCTAAGCCCTGGAGTTGATACGTTTGTTATTATG 1359
Query 1408 ATCAATGGATTAACAAGCCAAGGTTGT-TTACTCGAAGCCTGTGATCACTTTAAAGAAAT 1466
||||| ||||| ||||||||||||| | || ||||||||||| ||||||| ||||||||
Sbjct 1360 ATCAACGGATTTACAAGCCAAGGTT-TCCTAATCGAAGCCTGTAATCACTTCAAAGAAAT 1418
Query 1467 GGT-AGCTCGAGGATTGTTCTCCGTTCCTCAATACGGAACTCTGAAGTTATTGCTAAATA 1525
||| ||| |||||| | ||||| | |||||||| ||||| ||||||| |||||| ||||
Sbjct 1419 GGTAAGC-CGAGGAATATTCTCTGCGCCTCAATATGGAACGCTGAAGTCATTGCTTAATA 1477
Query 1526 CCCTT-TTAAAAGACAAGAAGCTCGAAATGGCAAAAGATGTTTGGAGTTGC--ATCACAA 1582
|||| || | ||| | |||||||||||||| |||||||| ||||||||| ||| |||
Sbjct 1478 ACCTTGTT-AGAGATGATAAGCTCGAAATGGCGAAAGATGTATGGAGTTGCATATC-CAA 1535
Query 1583 GTAAAGGCTC-T--TGCGAGCTGAGTGTATCATCGTGGACAATATGGATCCATGCCTTGT 1639
||| ||| | || ||||||| ||||||| | |||||||||||||||||||| ||||
Sbjct 1536 -CAAAACCTCTTCCTGTGAGCTGAATGTATCAGCTTGGACAATATGGATCCATGCTTTGT 1594
Query 1640 TCTCAAAAGGTTATGAAAAGGAGGCTTGTTCTTATTGTCTTGAAATGATAGAGATGGAGT 1699
| |||||||| | | ||||| || ||||| ||||||||||| ||||| |||||||| |
Sbjct 1595 ACGCAAAAGGTCACGTGAAGGAAGCGTGTTCGTATTGTCTTGATATGATGGAGATGGATT 1654
Query 1700 TCATGCCACAACC-AGACACATT-TGCTAAACTTATCAAGGGATTGAAGAAATTGTATCA 1757
| ||||| ||||| | | || || ||| |||||||| || |||||||| ||| ||||| |
Sbjct 1655 TGATGCCGCAACCTA-ATAC-TTATGCGAAACTTATGAAAGGATTGAATAAACTGTATAA 1712
Query 1758 TA-GA-GAATTCGCTGTAGAGATTACAGAGAAAGTGAG-GAATATGGC-AGCTGAGAGAG 1813
|| || | | |||||| ||||||||||||||| ||| | ||| ||||| || ||||||||
Sbjct 1713 TAGGACG-A-TCGCTGCAGAGATTACAGAGAAGGTG-GTGAAGATGGCAAG-TGAGAGAG 1768
Query 1814 AGATGAGTTTTAAGATGTATAAGA-GAAGAGGAGTGCAAGATTTGACTGAGAAAGCTAAA 1872
|||||||||||||||||||||||| ||| ||| | | | ||||||| |||||||||||||
Sbjct 1769 AGATGAGTTTTAAGATGTATAAGAAGAA-AGGTGAGGAGGATTTGATTGAGAAAGCTAAA 1827
Query 1873 TCTAAACAAGA-TAGAGAAGGGAAGAAGAA 1901
||||| || || |||||| ||||||||
Sbjct 1828 CCTAAAGG-GAATAAAGAAGGAAAGAAGAA 1856
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94929230595
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5