BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496832
Length=1574
Score E
Sequences producing significant alignments: (Bits) Value
AT5G67630.1 | Symbols: | P-loop containing nucleoside triphosp... 2566 0.0
AT3G49830.1 | Symbols: | P-loop containing nucleoside triphosp... 1171 0.0
> AT5G67630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:26967381-26969394
REVERSE LENGTH=1652
Length=1652
Score = 2566 bits (1389), Expect = 0.0
Identities = 1504/1561 (96%), Gaps = 2/1561 (0%)
Strand=Plus/Plus
Query 1 TTTTCTCTAAACCCTAAAAACCTCAACttttt-ttCTTCTTCCTCCGCCTCAATCGCACG 59
||||||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||
Sbjct 14 TTTTCTCTAAACCCT-AAAACCTTAACTTTTTGCTCTTCTCCCTCCGCCTCAATCGCACG 72
Query 60 AAGACGATTATCGAATATGGCGGAACTGAAGTTATCAGAGAGTCGGGATTTGACCAGAGT 119
|||||||| |||||||||||||||||| ||| |||||||||||||||| || ||||||||
Sbjct 73 AAGACGATAATCGAATATGGCGGAACTAAAGCTATCAGAGAGTCGGGACTTAACCAGAGT 132
Query 120 CGAGCGAATCGGCGCACACTCACACATCCGAGGGCTAGGTCTCGACTCAGCTCTCGAGCC 179
|||||||||||||||||||||||||||| |||| |||||||||||||| || ||||||||
Sbjct 133 CGAGCGAATCGGCGCACACTCACACATCAGAGGACTAGGTCTCGACTCTGCCCTCGAGCC 192
Query 180 ACGAGCCGTCTCCGAAGGAATGGTCGGTCAAGTGAAGGCTCGTAAAGCCGCCGGTGTAAT 239
||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 193 GCGAGCTGTTTCCGAAGGTATGGTCGGTCAAGTGAAGGCGCGTAAAGCCGCCGGTGTAAT 252
Query 240 CCTTCAGATGATTAGAGAAGGGAAAATCGCGGGTCGGGCTATTCTAATTGCGGGTCAACC 299
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 253 CCTTCAGATGATTAGAGAAGGGAAAATCGCGGGTCGGGCTATTCTAATAGCGGGTCAACC 312
Query 300 CGGAACAGGTAAGACCGCAATTGCAATGGGTATGGCGAAATCGCTTGGCTTGGAAACTCC 359
|||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||
Sbjct 313 CGGAACGGGTAAGACAGCGATTGCAATGGGTATGGCGAAATCTCTTGGCTTGGAAACTCC 372
Query 360 TTTTGCGATGATTGCAGGAAGTGAGATTTTCTCATTAGAGATGTCAAAGACAGAAGCTTT 419
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 373 TTTTGCGATGATTGCAGGAAGTGAAATTTTCTCATTAGAGATGTCAAAGACAGAAGCTTT 432
Query 420 GACTCAGTCTTTTCGTAAAGCGATTGGTGTTAGGATCAAAGAAGAGACTGAGGTTATTGA 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 433 GACTCAGTCTTTTCGTAAAGCGATTGGTGTTAGGATCAAAGAAGAGACAGAGGTTATTGA 492
Query 480 AGGAGAAGTTGTGGAGGTTCAGATTGATAGGCCTGCTTCTTCTGGTGTTGCTTCGAAGTC 539
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 493 AGGAGAAGTTGTTGAGGTTCAGATTGATAGGCCTGCTTCTTCTGGTGTTGCTTCCAAGTC 552
Query 540 TGGGAAGATGACTATGAAGACGACGGATATGGAAACTGTGTATGATATGGGAGCTAAGAT 599
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 553 AGGGAAGATGACTATGAAAACGACTGATATGGAAACTGTGTATGATATGGGAGCTAAGAT 612
Query 600 GATTGAGGCTTTGAACAAGGAGAAAGTTCAGAGTGGTGATGTTATTGCCATTGATAAGGC 659
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 613 GATTGAGGCTTTGAACAAGGAGAAAGTGCAGAGTGGTGATGTTATTGCCATTGATAAAGC 672
Query 660 TACTGGGAAGATTACTAAGCTTGGAAGATCGTTTTCGAGGTCTCGAGATTATGATGCTAT 719
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 673 TACTGGGAAGATTACTAAGCTTGGAAGATCGTTTTCGAGGTCTCGTGATTATGATGCTAT 732
Query 720 GGGTGCGCAGACTAAGTTTGTGCAGTGTCCTGAAGGTGAGTTGCAGAAGAGGAAAGAGGT 779
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 733 GGGTGCGCAGACCAAGTTTGTGCAGTGCCCTGAAGGTGAGTTGCAGAAGAGGAAAGAGGT 792
Query 780 TGTACATTGTGTGACACTTCACGAGATTGACGTTATCAACAGCAGGACACAAGGGTTTCT 839
|||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 793 TGTACATTGTGTCACTCTTCACGAGATTGATGTTATCAACAGCAGGACACAAGGGTTTCT 852
Query 840 CGCCCTTTTCACTGGCGATACTGGAGAAATCCGATCAGAAGTCCGGGAACAAATTGATAC 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 TGCCCTTTTCACTGGCGATACTGGAGAAATCCGATCAGAAGTCCGGGAACAAATTGATAC 912
Query 900 AAAAGTAGCTGAATGGAGAGAAGAAGGAAAAGCAGAGATAGTTCCCGGAGTTCTCTTCAT 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 913 AAAAGTAGCTGAATGGAGAGAAGAAGGAAAAGCAGAGATAGTTCCCGGAGTTCTCTTCAT 972
Query 960 TGATGAAGTCCACATGCTAGACATTGAATGCTTCTCATTCCTTAACCGAGCTCTCGAAAA 1019
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct 973 TGATGAAGTCCACATGCTCGACATCGAATGCTTCTCATTCCTTAACCGAGCTCTAGAAAA 1032
Query 1020 CGAAATGTCACCAATCCTCGTGGTGGCAACAAACCGAGGAGTGACGACAATCCGTGGCAC 1079
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 CGAAATGTCACCAATCCTTGTGGTGGCAACAAACCGAGGAGTGACGACAATCCGTGGCAC 1092
Query 1080 AAACCAGAAATCACCCCACGGGATCCCGATCGATCTCCTTGACCGTCTTCTCATCATCAC 1139
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1093 AAACCAGAAATCACCACACGGGATCCCGATTGATCTCCTTGACCGTCTTCTCATCATCAC 1152
Query 1140 TACCCAACCTTACACAGACGATGACATAAGGAAGATCTTAGAAATCCGTTGCCAAGAAGA 1199
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1153 TACCCAACCTTACACAGACGATGACATAAGGAAGATATTAGAAATCCGTTGCCAAGAGGA 1212
Query 1200 AGACGTTGAGATGAACGAAGAGGCAAAACAGCTTTTGACATTGATCGGACGTGATACATC 1259
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1213 AGACGTTGAGATGAACGAAGAGGCCAAACAGCTTTTGACATTGATCGGACGTGATACATC 1272
Query 1260 TCTAAGGTATGCGATTCATCTTATAACCGCGGCTGCATTGTCATGCCAGAAACGTAAAGG 1319
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1273 TCTAAGGTATGCGATTCATCTTATAACCGCAGCTGCATTGTCATGCCAGAAACGGAAAGG 1332
Query 1320 GAAAGTCGTGGAGGTGGAGGATATTGAGAGAGTTTACCGACTGTTCTTGGATGTGAGGAG 1379
||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1333 GAAAGTCGTGGAGGTTGAGGATATTCAGAGAGTTTACAGACTGTTCTTGGATGTGAGGAG 1392
Query 1380 ATCGATGCAGTATCTTGTTGAGTATCAGAGTCAGTATATGTTCAGTGAACCAATCAAAAA 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1393 ATCGATGCAGTATCTTGTTGAGTATCAGAGTCAGTATATGTTCAGTGAACCAATCAAAAA 1452
Query 1440 CGATGAAGCTGCTGCAGAAGACGAACAAGATGCTATGCAGATCTGAGGATCCATCTCTGT 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1453 CGATGAAGCTGCTGCAGAAGACGAACAAGATGCTATGCAGATCTGAGGATCCACCTCTGT 1512
Query 1500 TTGCCTTATTTATTATGTTTCGTGATGATATGTATGATTAGGATGTTGAACTCGGATTTA 1559
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1513 TTGCCTTATTTATCATGTTTCGTGGTGATATGTATGATTAGGATGTTGAACTCGGATTTA 1572
Query 1560 T 1560
|
Sbjct 1573 T 1573
> AT3G49830.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:18482383-18483940
FORWARD LENGTH=1422
Length=1422
Score = 1171 bits (634), Expect = 0.0
Identities = 1146/1390 (82%), Gaps = 47/1390 (3%)
Strand=Plus/Plus
Query 76 ATGGCGGAACTGAA-GTTATCAGAGAGTCGGGATTTGACCA-GAGTCGAGCGAATCGGCG 133
||||| ||||| || ||||||||| | ||| || || || | || |||| ||||||| |
Sbjct 1 ATGGCAGAACT-AAGGTTATCAGAAACTCGAGACTTAACTAGGA-TCGAAAGAATCGGAG 58
Query 134 CACACTCACACATCCGAGGGCTAGGTCTCGACTCAGCT-CTCGAGCCACGAGCCGTCTCC 192
||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||| |||
Sbjct 59 CACACTCACACATACGAGGTTTAGGTCTCGACTCAG-TACTCGAGCCACGAGCCGTATCC 117
Query 193 GAAGGAATGGTCGGTCAAGTGAAGGCTCGTAAAGCCGCCGGTGTAATCCTTC-AGATGAT 251
||||||||||| |||||| | || || |||||||||||||| |||| || || || ||||
Sbjct 118 GAAGGAATGGTTGGTCAAATCAAAGCACGTAAAGCCGCCGGAGTAA-CCCTCGAGTTGAT 176
Query 252 TAGAGAAGGGAAAATCGCGGGTCGGGCTATTCTAATTGCGGGTCAACCCGGAACAGGTAA 311
||||| || |||||| ||||||||||||| || || ||||||||||||||||| |||||
Sbjct 177 CAGAGACGGCAAAATCTCGGGTCGGGCTATACTTATAGCGGGTCAACCCGGAACGGGTAA 236
Query 312 GACCGCAATTGCAATGGGTATGGCGAAATCGCTTGG-CTTGGAAACTCCTTTTGCGATGA 370
| |||||| ||||||||||| || ||||| ||||| | ||||| || || | ||||
Sbjct 237 AATCGCAATAGCAATGGGTATAGCAAAATCACTTGGAC-AAGAAACACCATTCACTATGA 295
Query 371 TTGCAGGAAGTGAGAT-TTTCTCATTAGAGATGTCAAAGACAGAAGCTTTGACTC-AGTC 428
|||||||||||||||| ||| || ||||||||||||||||| |||||||| |||| || |
Sbjct 296 TTGCAGGAAGTGAGATCTTT-TCTTTAGAGATGTCAAAGACTGAAGCTTTAACTCAAG-C 353
Query 429 TTTTCGTAAAGCGATTGGTGTTAGGATCAAAGAAGAGACTGAGGTTATTGAAGGAGAAGT 488
|||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||
Sbjct 354 TTTTCGTAAAGCTATTGGTGTTAGGATCAAAGAAGAGACTGACGTGATAGAAGGAGAAGT 413
Query 489 TGTGGAGG-TT-CAGATTGATAGGCCTGCTTCTTCTGGTG-TTGCT-TC--GAAGTCTGG 542
|||| | | || | ||||||||| |||||||||||||||| || || | |||| ||||
Sbjct 414 TGTG-ACGATTTC-GATTGATAGACCTGCTTCTTCTGGTGGTT-CTGTGAAGAAGACTGG 470
Query 543 GAAGATGACTATGAAGACGACGGATATGGAAACTG-TGTATGATATGGGA-GCTAAGAT- 599
|||||| || ||||||||||| ||||||||| || | | |||| ||||| | || ||
Sbjct 471 GAAGATAACAATGAAGACGACTGATATGGAATCTAATTT-TGATTTGGGATGG-AA-ATT 527
Query 600 GATTGAGGCTTTGAACAAGGAGAAAGTTCAGAGTGGTGATGTTATTGCCATTG-ATAAGG 658
||||||| | ||| | ||||||||||| ||||||||||||||||||| ||| ||| ||
Sbjct 528 GATTGAGCCATTGGATAAGGAGAAAGTACAGAGTGGTGATGTTATTGTT-TTGGATA-GG 585
Query 659 CTAC-TGGGAAGATTACTAAGCTTGGAAGATCGTTTT-CGAGGTCTCGAGATTATGATGC 716
| ||||||||||||||||||||||||||| |||| |||||||| |||||| |||||
Sbjct 586 TTTTGTGGGAAGATTACTAAGCTTGGAAGATC-TTTTACGAGGTCTAGAGATTTTGATGT 644
Query 717 TATGGGTGCGCAGACTAAGTTTGTGCAGTGTCCTGAAGGTGAG-TTGCAGAAGAGGAAAG 775
||||||| | ||||||||||||||||||| |||||||||||| ||| |||||||||| |
Sbjct 645 TATGGGTTCAAAGACTAAGTTTGTGCAGTGCCCTGAAGGTGAGCTTG-AGAAGAGGAAGG 703
Query 776 AGGTTGTACATTGTGTGACACTTCACGAGATTGACGTTATCAACAGCAGGACACAAGGGT 835
||||| | |||| ||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct 704 AGGTTTTGCATTCTGTCACACTTCATGAGATTGATGTTATTAATAGCAGGACTCAAGGGT 763
Query 836 TTCTCGCCCTTTTCACTGGCGATACTGGAGAAATCCGATCAGAAGTCCGGGAACAAATTG 895
||| ||||| ||||| || ||||| || || || || |||||| ||| || |||| |
Sbjct 764 ATCTAGCCCTCTTCACAGGTGATACAGGCGAGATTCGTTCAGAAACCCGAGAGCAAAGCG 823
Query 896 ATACAAAAGTAGCTGAATGGAGAGAAGAAGGAAAAGCAGAGATAGTTCCCGGAGTTCTCT 955
|||| ||||| || || |||||||||||||| ||||| || ||||| || || |||||||
Sbjct 824 ATACTAAAGTGGCAGAGTGGAGAGAAGAAGGGAAAGCTGAAATAGTACCTGGTGTTCTCT 883
Query 956 TCATTGATGAAGTCCACATGCTAGACATTGAATGCTTCTCATTCCTTAACCGAGCTCTCG 1015
|||||||||||||||| ||||| || || ||||||||||| ||||| || |||||||||
Sbjct 884 TCATTGATGAAGTCCATATGCTTGATATCGAATGCTTCTCTTTCCTGAATAGAGCTCTCG 943
Query 1016 AAAACGAAATGTCACCAATCCTCGTGGTGGCAACAAACCGAGGAGTGACGACAATCCGTG 1075
||||||| |||||||||||||| || ||||| |||||| ||||| |||| |||||||| |
Sbjct 944 AAAACGATATGTCACCAATCCTGGTCGTGGCTACAAACAGAGGAATGACAACAATCCGAG 1003
Query 1076 GCACAAACCAGAAATCACCCCACGGGATCCCGATCGATCTCCTTGACCGTCTTCTCATCA 1135
| |||||||||| |||| | || |||||||| |||||| | |||||||||||||| || |
Sbjct 1004 GAACAAACCAGATATCAGCACATGGGATCCCAATCGATTTTCTTGACCGTCTTCTTATTA 1063
Query 1136 TCACTACCCAACCTTACACAGACGATGACATAAGGAAGATCTTAGAAATCCGTTGCCAAG 1195
|||| || || ||||||||| | || || || || || || ||||| |||||||||||||
Sbjct 1064 TCACAACACAGCCTTACACACAAGACGAGATCAGAAATATTTTAGAGATCCGTTGCCAAG 1123
Query 1196 AAGAAGACGTTGAGATGAACGAAGAGGCAAAACAGCTTTTGACATTGATCGGACGTGATA 1255
|||| || || ||||||||||| || || ||||||||| |||| ||||||||| || |||
Sbjct 1124 AAGAGGATGTGGAGATGAACGAGGAAGCGAAACAGCTTCTGACTTTGATCGGATGTAATA 1183
Query 1256 CATCTCTAAGGTATGCGATTCATCTTAT-AACCGCGGCTGCATT-GTCATGCCAGAAACG 1313
| || || ||||| ||||||||||| || || || ||||| | | | |||| ||||||
Sbjct 1184 CCTCGCTTAGGTACGCGATTCATCTAATCAAT-GCAGCTGCCCTAG-CTTGCCTGAAACG 1241
Query 1314 TAAAGGGAAAGTCGTGGAGGTGGAGGATATTGAGAGAGTTTACCGACTGTTCTTGGATGT 1373
||||||||||||||| ||| | |||| |||||||||||||| || |||| || ||
Sbjct 1242 TAAAGGGAAAGTCGTAGAGATTCAGGACATTGAGAGAGTTTATAGATTGTTTTTAGACAC 1301
Query 1374 GAGGAGATCGATGCAGTATCTTG-TTGAGTATCAGAGTC-AGTA-TATGTTCAGTGAACC 1430
| ||||||||||||||| |||| ||||| || |||| | |||| | |||| || | ||
Sbjct 1302 CAAGAGATCGATGCAGTA-CTTGGTTGAGCATGAGAG-CGAGTACT-TGTTTAGCGTGCC 1358
Query 1431 AATCAAAAAC 1440
|| ||||||
Sbjct 1359 TATAAAAAAC 1368
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77710443660
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5