BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496843 Length=1202 Score E Sequences producing significant alignments: (Bits) Value AT5G67520.1 | Symbols: APK4 | adenosine-5'-phosphosulfate (APS)... 1399 0.0 > AT5G67520.1 | Symbols: APK4 | adenosine-5'-phosphosulfate (APS) kinase 4 | chr5:26939159-26941010 FORWARD LENGTH=1284 Length=1284 Score = 1399 bits (757), Expect = 0.0 Identities = 1073/1213 (88%), Gaps = 72/1213 (6%) Strand=Plus/Plus Query 2 ACCGACTTAAAATATAAATTTAAAGATCGTT-AAAAACAAAACTGTACAATTGTTTTCTG 60 ||||||||||||||| ||||| ||||||||| |||||| ||||| ||||| ||||| || Sbjct 43 ACCGACTTAAAATATTAATTT-AAGATCGTTAAAAAAC-AAACTCTACAA--GTTTT-TG 97 Query 61 A-TTCAGAGTTCACCGTTGAGCGTGTTCAATTAAATCGTTGAATCTCGCGGTGCCATTTT 119 | |||||||| ||||||||||| |||||||||||||||||||||||||||||| | |||| Sbjct 98 ATTTCAGAGTCCACCGTTGAGCCTGTTCAATTAAATCGTTGAATCTCGCGGTG-CGTTTT 156 Query 120 ACGTTGCTTCTTTCGAATCTTTCTTATATGGATATTGCCGCGGTGGCGAGATGTGTTGGA 179 || ||| ||||||||||| ||| |||||||||| |||||||| ||||||||||||| ||| Sbjct 157 ACTTTGATTCTTTCGAATTTTTTTTATATGGATGTTGCCGCGATGGCGAGATGTGTGGGA 216 Query 180 AGGTGCTATGTTTCGCCGGCGTTCGGAGAATCCGAA-CCCTTCCGGTTATCGGAGCGGCG 238 |||||||| ||||||||||||||||| || || ||| | | |||||||||||||||||| Sbjct 217 AGGTGCTACGTTTCGCCGGCGTTCGGTGAGTCTGAATCGC-ACCGGTTATCGGAGCGGCG 275 Query 239 GTTTCTGAAATTTTCTTGCTCCACGAATTCGGATCCCACCGGTAGTAGAAGTTTGATA-T 297 |||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||| | Sbjct 276 GTTTCTGAAATTGTCTAGCTCCACGAATTCGGATCCCGCCGGTAGTAAAAGTTTGA-AGC 334 Query 298 TTGGCGGGAAAAGTCACCGGAGACTTG-GCTTCTTCCGTCCGATCATGGCGACAGATGAA 356 || ||||||||| ||| |||||| || ||| |||||||||||||||||| | ||||||| Sbjct 335 TTCGCGGGAAAATTCATCGGAGA-ATGAGCTACTTCCGTCCGATCATGGCAAAAGATGAA 393 Query 357 TCGATTTCATCGCGGTCCTCTGATTGCGCCGGTGAAACAAAGCAAATCAACGGAAAGCAA 416 || |||||||||| | | | |||||||||| ||||||||||| ||||||||| Sbjct 394 TCCATTTCATCGC-G------G--T---CCGGTGAAACGAAGCAAATCAATGGAAAGCAA 441 Query 417 AAGAACATTGTCTGGCATGATTGTCCCGTTACTCAATCAGACAGGCAAAAATTGATTAAG 476 ||||||||||||||||||||||||||||||||| |||| ||||||||| |||| |||||| Sbjct 442 AAGAACATTGTCTGGCATGATTGTCCCGTTACTAAATCCGACAGGCAAGAATTAATTAAG 501 Query 477 CAAAAGGGATGTGTTATTTGGATTACTGGCTTAAGTGGTTCAGGTAAAAGTAGTCTGGCA 536 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 502 CAAAAGGGATGTGTGATTTGGATTACTGGCTTAAGTGGTTCAGGTAAAAGTAGTCTGGCA 561 Query 537 TGTGCTCTTAGTCGAGCTTTGCACAGTCGTGGAAAGATTTCGTATATACTTGATGGGGAC 596 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| Sbjct 562 TGTGCTCTTAGTCGAGCTTTGCACAATCGTGGAAAGCTTTCGTATATACTTGATGGTGAC 621 Query 597 AATGTTCGACATGGTTTAAACAGCGATCTTAGTTTCGAAGCAGAAGATCGAGCTGAAAAT 656 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 622 AATGTTCGACATGGTTTAAACAGCGATCTTAGTTTCGAAGCAGATGATCGAGCTGAAAAC 681 Query 657 ATTAGAAGAGTTGGTGAAGTGGCTAAACTGTTTGCAGATGCTGGTATAATCTGTATTGCA 716 ||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct 682 ATTCGAAGAGTTGGTGAAGTGGCTAAACTGTTTGCAGATTCTGGTATTATCTGTATTGCA 741 Query 717 AGTTTGATATCTCCTTACCGCAGAGAACGAGCTGCTTGCCGTGCATTGCTACC-CGAAGG 775 ||||| |||||||||||||| | |||||||||||| ||||||||||| |||| | |||| Sbjct 742 AGTTTAATATCTCCTTACCGGATAGAACGAGCTGCCTGCCGTGCATTATTACCAC-AAGG 800 Query 776 AGATTTCATTGAGGTATTTATGGATGTGCCACTCCATGTTTGTGAAGCTAGAGATCCAAA 835 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 801 AGATTTCATTGAGGTATTTATGGATGTGCCACTCCATGTTTGTGAAGCTAGAGATCCAAA 860 Query 836 GGGCTTATACAAACGTGCACGTGCTGGGAAAATCAAAGGTTTTACAGGAGTAGATGATCC 895 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 861 GGGCTTATACAAACGTGCACGCGCTGGTAAAATCAAAGGTTTTACAGGAGTAGATGATCC 920 Query 896 ATATGAACCGCCTTTGGATTGCGAGATTGTGATACAAAACAACAGAGACAAGGG--t--c 951 ||||||| |||||||||||||||||||||| |||||||||| ||||||||||| | | Sbjct 921 ATATGAAGCGCCTTTGGATTGCGAGATTGTAATACAAAACAGTAGAGACAAGGGGCTTTC 980 Query 952 tt-t-c-t-t-c-t-t-catcttc-c-t-c-t-t-c-t-t-ct-ct--GTGTGAAATGGC 991 || | | | | | | | ||||||| | | | | | | | | || || |||||||||||| Sbjct 981 TTCTTCATCTTCATCTTCATCTTCACCTTCATCTTCGTCTTCTTCTCTGTGTGAAATGGC 1040 Query 992 AGAGATTGTTGTATCGTACTTGGACCAAAATGGATACCTCCAGACGCCTTAGAAACACTC 1051 ||| |||||||| |||||||||||||||||||||||||| || |||||||||| Sbjct 1041 AGATATTGTTGTGTCGTACTTGGACCAAAATGGATACCT---GA------AGAAACACTC 1091 Query 1052 CACAAAATCACATAATTGTATACTTTCCTTGTGAATGTGATACTAAAATCATTGTTGTAA 1111 ||||||||||| ||||||||| || ||||| ||| ||| ||||||||||||| Sbjct 1092 CACAAAATCACGTAATTGTAT---------GTAAATGTAATATTAATATCATTGTTGTAA 1142 Query 1112 CGTTTCTTAAACCTATTTTACCTTTGGATGATTAAATTGTGAAAACATCAATGTA-T-CA 1169 ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||| | || Sbjct 1143 CGTTTCTTAAACCTATTTTACCTATGGACGATTAAATTGTGAAAACATAAATGTAATTCA 1202 Query 1170 CAATCTGCAAAGA 1182 ||||||||||||| Sbjct 1203 CAATCTGCAAAGA 1215 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59035840920 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5