BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496856 Length=867 Score E Sequences producing significant alignments: (Bits) Value AT5G67410.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1208 0.0 > AT5G67410.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:26896600-26897463 REVERSE LENGTH=864 Length=864 Score = 1208 bits (654), Expect = 0.0 Identities = 807/877 (92%), Gaps = 26/877 (3%) Strand=Plus/Plus Query 1 ATGCCAACGAGTCAGCATCATGTCGTTAGAACAGACATTGCAGTGTTAAAATCTCAGATT 60 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct 1 ATGCCAACGAGTCAGCATCATGTCGTTAGAACAGACATTTCAGAGTTAAAATCTCAGATT 60 Query 61 GAGAAGAGGATTGGTCGGGCCAAAACTGAGAGCTACCTTAATCTCTTATCGAAATTCTTG 120 |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct 61 GAGAAGAGGATTGGTCGGGCCAAAACAGAGAGTTACCTTAATCTCTTATCAAAATTCTTG 120 Query 121 AGTTTGAAAATCAGCAAATCTGATTTCGATAAGCTAATCATTGCGACGGTGAAGAGGGAG 180 || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 121 AGCTTGAAAATCAGCAAATCTGATTTCGATAAGCTAATCATTGTGACGGTGAAGAGGGAG 180 Query 181 AATATAAGTCTACACAACGCTTTGCTAAGAGGGATTCTTAAGAACGTATGTCTCTCTTCA 240 |||||||||||||||||||||||||| ||||||||||||||||| ||| | |||| ||| Sbjct 181 AATATAAGTCTACACAACGCTTTGCTTAGAGGGATTCTTAAGAA--TATATGTCTC-TCA 237 Query 241 AAG--AC-ACCTCCGTT-GATAAAGAATGGTGT--AGT-AGATTCAGAGAAGAAGAAGAA 293 ||| || |||||| || | ||||||||||||| ||| ||| | | | ||||||||||| Sbjct 238 AAGACACTACCTCCATTCG-TAAAGAATGGTGTAGAGTCAGA-T-A-ACAAGAAGAAGAA 293 Query 294 GCAATTATATGGAGTTTTTCAATCTTTGTGCAAAGACCTTCCTAAATCGCCTCGTAAAGG 353 |||| || |||||| ||||||||||||||||||||| ||||||| ||| ||||||||||| Sbjct 294 GCAACTAAATGGAGCTTTTCAATCTTTGTGCAAAGAACTTCCTAGATCACCTCGTAAAGG 353 Query 354 AAGGACTCAACGGAGG-TT--TAAAGATAGTAATGTTAGCAAAGGTAAAAGTCTAATCAC 410 |||||||||||||||| || ||||||| ||||| |||||||||| || |||||| |||| Sbjct 354 AAGGACTCAACGGAGGCTTAATAAAGATGGTAATATTAGCAAAGGGAAGAGTCTAGTCAC 413 Query 411 TGAGGTTGTTTCTTCTAGTGGTAGACAACAATGGTTAATGGAAAATGGTGAAGAAGTTGA 470 |||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| Sbjct 414 TGAGGTTGTTTCTTCTAGTGGTAGGCAACAATGGTCAATGGAAAATGTTGAAGAAGTTGA 473 Query 471 CCAATTGATTCGATGTTGGAGAAGTCAACCTATTGAAGCTCCTTTTGGTGTTAATCTTAG 530 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 474 CCAATTGATTCCATGTTGGAGAAGTCAACCTATTGAAGCTCCTTTTGGTGTTAATCTTAG 533 Query 531 AGATGTTATAGAGAAACAACATCGTATAGGCACATGTTGTTGCTCCTCTGGTGAGCTTCC 590 |||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||||||| Sbjct 534 AGATGTTATAAAGAAACAACATCGTATAGACACGTGTTGTTACTCCTCTGGTGAGCTTCC 593 Query 591 TGATTCGGTTTCTTTAAAGAAGAAACTCGAAGATGACTCGGGGTTTATAGAGCAAGGATT 650 |||||||||||||||||||||||||||||||||||||| || | | | ||||||| Sbjct 594 TGATTCGGTTTCTTTAAAGAAGAAACTCGAAGATGACTTGG-----A--G-G-AAGGATT 644 Query 651 AGAGGTTTCGGTTGGGTTTGCCAACACGTTAAACGCAGGGTTGGATGTTTTCTTGAAGAG 710 ||||||||||||||||||||| ||| |||||||||||||| | ||||||||||||||||| Sbjct 645 AGAGGTTTCGGTTGGGTTTGCTAACTCGTTAAACGCAGGGCTAGATGTTTTCTTGAAGAG 704 Query 711 ATTGATCAAACCATGTCTTGAATTAGCAGCTTCAAGGTCTAGTAACGCTTCACCAGCATC 770 |||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 705 ATTGATCAAACCGTGTCTTGAACTAGCAGCTTCAAGGTCTAGTAACGCTTCATCAGCATC 764 Query 771 TTCTCTGGTAGATTTTCAAGTAGCTATGGAGTTAAATCCGTCGATACTCGGGGAAGATTG 830 ||||||||||||||||||||||||||||| |||||| || |||||||| ||||||||||| Sbjct 765 TTCTCTGGTAGATTTTCAAGTAGCTATGGCGTTAAACCCATCGATACTAGGGGAAGATTG 824 Query 831 GCCTGCAAAGCTTGAGAAGATCGCCTGCAGATTCAGA 867 |||| |||||||||||||||||||||||||||||||| Sbjct 825 GCCTACAAAGCTTGAGAAGATCGCCTGCAGATTCAGA 861 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42297151774 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5