BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496866
Length=1793
Score E
Sequences producing significant alignments: (Bits) Value
AT5G67330.1 | Symbols: ATNRAMP4, NRAMP4 | natural resistance as... 2567 0.0
AT2G23150.1 | Symbols: NRAMP3, ATNRAMP3 | natural resistance-as... 736 0.0
AT4G18790.1 | Symbols: NRAMP5, ATNRAMP5 | NRAMP metal ion trans... 483 3e-135
> AT5G67330.1 | Symbols: ATNRAMP4, NRAMP4 | natural resistance
associated macrophage protein 4 | chr5:26861727-26863897 FORWARD
LENGTH=1951
Length=1951
Score = 2567 bits (1390), Expect = 0.0
Identities = 1659/1783 (93%), Gaps = 41/1783 (2%)
Strand=Plus/Plus
Query 46 GGCGGTTACCGGAAAACATGTCGGAGACCGATAGAGAGCGTCCGTTATTAGAATCGGAGG 105
|||||||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 79 GGCGGTTACCGGGAAATATGTCGGAGACTGATAGAGAGCGTCCGTTATTAGCATCGGAGG 138
Query 106 AGAGGGCTTATGAAGAAACCGAGAAAGTTCTCATAGTCGGAATCGACGAAGAAGAAGACG 165
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 139 AGAGAGCTTATGAAGAAACCGAGAAAGTTCTCATAGTCGGAATCGACGAAGAAGAAGACG 198
Query 166 CTGATTACGACGACGACCCCGGAAACTCTCCTAAATTCTCATGGAAGAAGCTTTGGCTAT 225
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 199 CTGATTACGACGATGACCCCGGAAACTCTCCTAAATTCTCATGGAAGAAGCTTTGGCTAT 258
Query 226 TCACCGGACCTGGGTTTCTGATGAGTATCGCTTTCATCGATCCAGGTAATCTCGAGGGCG 285
|||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 259 TCACTGGACCTGGTTTTCTGATGAGTATCGCTTTCCTCGATCCAGGTAATCTCGAGAGCG 318
Query 286 ATCTTCAAGCTGGAGCCATCGCTGGCTACTCTTTGATTTGGCTCTTGATGTGGGCTACTG 345
||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |
Sbjct 319 ATCTTCAAGCTGGAGCCATCGCTGGTTACTCTTTGATTTGGCTATTGATGTGGGCTACGG 378
Query 346 CGATTGGCCTTTTGATCCAACTTCTCTCTGCTCGTCTCGGTGTCGCGACTGGTCGGCATC 405
||||||| ||| |||| |||||||| ||||| ||||||||||| ||||| ||| | ||||
Sbjct 379 CGATTGGGCTTCTGATTCAACTTCTATCTGCCCGTCTCGGTGTGGCGACGGGTAGACATC 438
Query 406 TGGCGGAGTTGTGTCGTGAAGAGTATCCGACTTGGGCAAGGATGGTGCTTTGGATTATGG 465
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 TGGCGGAGTTGTGTCGAGAAGAGTATCCGACTTGGGCAAGGATGGTGCTTTGGATTATGG 498
Query 466 CGGAGATTGCTTTGATCGGAGCTGATATTCAAGAAGTTATTGGTAGTGCTATAGCTATCA 525
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 499 CGGAGATTGCTTTGATCGGAGCTGATATTCAGGAAGTTATTGGTAGTGCTATAGCTATCA 558
Query 526 AGATCTTGTCTAATGGATTGGTTCCTCTTTGGGCTGGTGTTGTTATCACTGCTCTTGATT 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 559 AGATCTTGTCTAATGGATTGGTTCCTCTTTGGGCTGGTGTTGTTATCACTGCTCTTGATT 618
Query 586 GTTTCATCTTTCTATTTTTGGAGAATTATGGAATAAGGAAACTAGAAGCTGTGTTTGCTA 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 619 GTTTCATCTTTCTATTTTTGGAGAATTATGGAATAAGGAAACTAGAAGCTGTGTTTGCTA 678
Query 646 TTTTGATTGCAACAATGGCTCTTGCATTTGCTTGGATGTTTGGTCAGACTAAACCCAGTG 705
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 679 TTTTGATTGCAACAATGGCTCTTGCATTTGCTTGGATGTTTGGTCAGACGAAACCCAGTG 738
Query 706 GAACCGAACTCCTTGTTGGAGCATTGGTCCCTAAGCTCAGTTCGAGGACTATCAAACAAG 765
|||| || ||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct 739 GAACTGAGCTCCTTGTTGGAGCATTGGTCCCTAAGCTTAGCTCCAGGACTATCAAACAAG 798
Query 766 CTGTTGGTGTTGTGGGATGTATTATCATGCCTCACAATGTGTTCTTGCATTCAGCACTTG 825
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 799 CTGTTGGTATTGTGGGATGTATTATCATGCCTCACAATGTGTTCTTGCATTCAGCACTTG 858
Query 826 TGCAATCCAGAGAAGTCGATCCTAAAAAGAGATTCCGGGTCAAAGAAGCTCTCAAGTACT 885
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 859 TGCAATCCAGAGAAGTCGATCCGAAAAAGAGATTCCGGGTCAAAGAAGCTCTCAAGTACT 918
Query 886 ACTCCATTGAATCTACTGGTGCTCTTGCGGTTTCCTTCATTATCAACGTCTTTGTGACCA 945
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 919 ACTCCATTGAATCCACTGGTGCTCTTGCGGTTTCTTTCATTATCAACGTCTTTGTGACCA 978
Query 946 CGGTTTTTGCCAAGTCGTTTTACGGAACAGAGATAGCGGATACCATCGGTCTTGCAAATG 1005
|||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 979 CGGTGTTTGCCAAGTCGTTTTACGGGACAGAGATAGCGGACACCATCGGTCTTGCAAATG 1038
Query 1006 CTGGACAGTACTTACAGGACAAATACGGTGGCGGGTTTTTCCCGATACTGTATATATGGG 1065
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1039 CTGGACAGTACTTACAGGACAAATACGGGGGTGGGTTTTTCCCGATACTGTATATATGGG 1098
Query 1066 CGATTGGAGTCTTAGCTGCTGGTCAGAGTAGTACCATCACAGGTACTTACGCTGGACAGT 1125
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 1099 CGATTGGAGTCTTAGCTGCTGGTCAGAGTAGTACCATCACAGGTACGTACGCCGGACAGT 1158
Query 1126 TTATAATGGGAGGGTTCTTGAATCTCAAGATGAAGAAATGGGTTAGAGCCTTAATCACAA 1185
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1159 TTATAATGGGAGGGTTCTTGAATCTCAAGATGAAGAAATGGGTTAGAGCCTTGATCACAA 1218
Query 1186 GAAGCTGCGCAATCATCCCAACAATGATTGTTGCGCTTTTCTTTGATTCATCGGATTCTA 1245
||||||| |||||||| ||||||||||| || |||||| |||||||||||||||||||||
Sbjct 1219 GAAGCTGTGCAATCATACCAACAATGATCGTGGCGCTTGTCTTTGATTCATCGGATTCTA 1278
Query 1246 TGCTCGACGAGCTCAACGAATGGCTAAATGTTCTTCAATCAGTTCAGATCCCTTTCGCCG 1305
|||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct 1279 TGCTTGATGAGCTCAACGAATGGCTAAACGTTCTTCAATCGGTTCAGATCCCTTTCGCTG 1338
Query 1306 TCATCCCTCTGCTCTGCTTGGTCTCCAATGACCAAATCATGGGCAGTTTCAAAATACAAC 1365
| ||||| || || ||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 1339 TGATCCCACTCCTTTGCTTGGTCTCCAATGAGCAAATCATGGGCAGTTTCAAAATTCAAC 1398
Query 1366 CATTAGTCCAGACAATCTCATGGATTGTAGCTGCCCTTGTGATAGCCATTAATGGGTATC 1425
| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 1399 CTTTAGTCCAAACAATCTCATGGATAGTAGCTGCTCTTGTGATAGCCATTAATGGGTATC 1458
Query 1426 TAATGGTGGACTTCTTCTCAGGAGCAGCGACGAACGTGGTTTTGCTCGTGCCAGTGATCA 1485
|||||||||| |||||||||||||| || ||||| || ||||||| |||||||||||||
Sbjct 1459 TAATGGTGGATTTCTTCTCAGGAGCTGCAACGAATTTGATTTTGCTTGTGCCAGTGATCA 1518
Query 1486 TATTCGCAATTGCGTATGTTTTGTTTGTGCTTTACCTTATATCACGAGG-CATCACGTAC 1544
||||||||||||| |||||| ||||||| ||||||||||| |||||||| | ||||||||
Sbjct 1519 TATTCGCAATTGCTTATGTTGTGTTTGTACTTTACCTTATCTCACGAGGAC-TCACGTAC 1577
Query 1545 ACTCCCTGGCAACTAGTGGCTTC---ACATAAAGAACCACAGAGGGATGATGAGTAAGTG 1601
||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1578 ACTCCTTGGCAACTAGTGGCTTCTTCACATAAAGAACCACAGAGGGATGATGAGTGAGTA 1637
Query 1602 AAGGAAAAGCAAAGAGACCTTTTCATTGAAGAATAAGAATAAGAGAGAT-G--------A 1652
||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1638 AAGGAAAAGCAAAGAGACCTTTTCATTGAAGAATAAGAATAAGAGAGATTGCTCTTTTTA 1697
Query 1653 ---AA-CAAACAATAGAAAGTTGGGTTTCAGTATGGTAACAA-----T-T--TG-T--AT 1697
|| ||||||||||||||||| |||||||||||||||||| | | || | ||
Sbjct 1698 GTGAAACAAACAATAGAAAGTTGAGTTTCAGTATGGTAACAAAACAATGTCCTGATGTAT 1757
Query 1698 ----A--ATAGTGTTTTATGGTTTT-AGAATATAGTTTTGGAAGAATCTGAACTGTTTCG 1750
| |||||||||||||||||| ||| ||||| |||||||||||| ||| | ||
Sbjct 1758 TTGTATTATAGTGTTTTATGGTTTTTAGAGTATAGCTTTGGAAGAATCCGAA-T----CG 1812
Query 1751 TATCATTTGTGTAAGACTTCCGGCGTTTCTTTGAATTTTGGCA 1793
|||| ||||||||| |||||||||||||||| |||||||||||
Sbjct 1813 TATCGTTTGTGTAAAACTTCCGGCGTTTCTTAGAATTTTGGCA 1855
> AT2G23150.1 | Symbols: NRAMP3, ATNRAMP3 | natural resistance-associated
macrophage protein 3 | chr2:9856192-9858574 REVERSE
LENGTH=1769
Length=1769
Score = 736 bits (398), Expect = 0.0
Identities = 1002/1284 (78%), Gaps = 80/1284 (6%)
Strand=Plus/Plus
Query 201 TTCTCATGGAAGAAGCTTTGGCTATTCACCGGACCTGGGTTTCTGATGAGTATCGC-TTT 259
||||||||||||||||| ||| |||||||||||||||||||| | ||||| || || |||
Sbjct 160 TTCTCATGGAAGAAGCTATGGTTATTCACCGGACCTGGGTTTTTAATGAGCATTGCGTTT 219
Query 260 CATCGATCCAGGTAATCTCGAGGGCGATCTTCAAGCTGGAGCCATCGCTGGCTACTCTTT 319
| |||||||| |||||||| || ||||||||||| || || | ||||| ||||||||
Sbjct 220 -TTAGATCCAGGGAATCTCGAAGGAGATCTTCAAGCCGGTGCGGTTGCTGGGTACTCTTT 278
Query 320 GATT-TGGC-TCTTGATGTGGGCTACTGCGATTGGCCTTTTGATCCAACTTCTCTCTGCT 377
| || |||| || | |||||||| || || || || |||||| | || ||| | || |||
Sbjct 279 G-TTATGGCTTC-TCATGTGGGCAACAGCAATGGGTCTTTTGGTTCAGCTTTTGTCGGCT 336
Query 378 CGTCTCGGTGTCGCGACTGGTCGGCATC-TGGCGGAG-TTGTGTCGTGAAGAGTATCCGA 435
| || ||||| ||||| ||||| || | | || ||| || |||||||| |||||||| |
Sbjct 337 AGGCTTGGTGTTGCGACAGGTCGTCA-CTTAGCTGAGCTT-TGTCGTGATGAGTATCCTA 394
Query 436 CTTGGGCAAGGATGGTGCTT-TGGATTATGGCGGAGATT-GCTTTGATCGGAGCTGATAT 493
|||||||||| ||||| || ||| ||||||| || ||| |||||||| ||| |||||||
Sbjct 395 CTTGGGCAAGAATGGT-TTTGTGGGTTATGGCTGA-ATTGGCTTTGATTGGATCTGATAT 452
Query 494 TCAAGAAGTTATTGGTAGTGCTATAGCTATCAAGATCTTGTCTAATGG-ATTGGTT-CCT 551
|||||||||||||||||||||||| ||||||||||| ||| |||||| ||| || |||
Sbjct 453 TCAAGAAGTTATTGGTAGTGCTATTGCTATCAAGATTTTGAGTAATGGGATT--TTGCCT 510
Query 552 CTTTGGGCTGGTGTTGTTATCACTGCTCTTGATTGTTTCATCTTTCTA-TTT-TTGGAGA 609
|||||||||||||||||||| |||||||||||||||||| |||| || ||| ||| |||
Sbjct 511 CTTTGGGCTGGTGTTGTTATTACTGCTCTTGATTGTTTCGTCTT-CTTGTTTCTTG-AGA 568
Query 610 ATTATGGAATAAGGAAACTAGAAGCTGTGTTTGCTA-TT-TTGATTGCAACAATGGC--T 665
| || ||||||||||| || || ||||||||||| | || || || || ||||||| |
Sbjct 569 ACTACGGAATAAGGAAGCTCGAGGCTGTGTTTGC-AGTTCTT-ATCGCTACAATGGGAGT 626
Query 666 CTTGCATTTGCTTGGATGTTTGGTCA-GACTAAACCCAGTGGAACCGAACTCCTTGTTGG 724
|| |||| ||||||||||||||||| | |||| || ||||| | || || || ||||
Sbjct 627 CT--CATTCGCTTGGATGTTTGGTCAAG-CTAAGCCAAGTGGCTCTGAGCTTCTCATTGG 683
Query 725 AGCATT--GGTCCCTAAGCTCAGTTCGAGGACTAT-CAAACAAGCTGTTGGTGTTGTGGG 781
| ||| ||| || || || ||||| || || || || | |||| ||||| ||||||||
Sbjct 684 -G-ATTTTGGTACCGAAACTGAGTTCAAGAACGATACAGA-AAGCAGTTGGAGTTGTGGG 740
Query 782 ATGTATTATCATGCCTCACAATGTGTT-CTTGCATTCAGCACTTGTGCAATCCAGAGAAG 840
|| ||||| ||||| ||||||||||| ||| || ||||| ||||| ||||| |||||||
Sbjct 741 TTGCATTATAATGCCACACAATGTGTTTCTT-CACTCAGCTCTTGTTCAATCTAGAGAAG 799
Query 841 TCGATCCTAAA--A-AGAGATTCCGGGTCAAAGAAGCTCTCAAGTACTACTCCATTGAAT 897
||||| ||| | ||| || ||| ||| ||||||| || || |||||| | || ||||
Sbjct 800 TCGAT---AAACGACAGAAATACCGAGTCCAAGAAGCGCTAAACTACTACACAATAGAAT 856
Query 898 CTACTGGTGCTCTTG-CGGTTTCCTTCATT-ATCAA-CGTCTTTGTGACCACGGTTTTTG 954
| || ||||||| | | ||||| || ||||| | | ||||| || || ||||| |
Sbjct 857 CCACAATTGCTCTTTTCA-TCTCCTTT-TTGATCAATC-TGTTTGTCACAACTGTTTTCG 913
Query 955 CCAA-GTCGTTTTACGGA-ACAGAGATAGCGGATACCATCGGTCTTGCA-AATGCTGGAC 1011
|||| | |||||| | || || | || ||| ||||||| ||| || || ||||
Sbjct 914 CCAAAGG-GTTTTATA-ATACTGACCTCGCCAATAGCATCGGT-TTGGTTAACGCGGGAC 970
Query 1012 AGTA-CTTACAGGACAAATACGGTGGCGG-GTTTTTCCCGATACTGTATATATGGGCGAT 1069
|||| ||| ||||| ||||| || ||||| || || ||||||||| || || ||||||||
Sbjct 971 AGTATCTT-CAGGAGAAATATGGAGGCGGTGTGTT-CCCGATACTATACATTTGGGCGAT 1028
Query 1070 TGGAG-TCTTAGCTGCTGGTCAGAGTAGTACCATCACAGGTACTTACGCTGGACAGTTTA 1128
|| | | ||||||||||| || || || || || || ||||| || || |||||||| |
Sbjct 1029 CGG-GCTATTAGCTGCTGGCCAAAGCAGCACTATTACCGGTACATATGCGGGACAGTTCA 1087
Query 1129 TAATGGGAGGGTT-CTTGAATCTCAAGATGAAGAAATGGGTT-AGAGCCTTAATCACAAG 1186
||||||| ||||| ||| ||| |||| |||||||||||| || ||||| || |||||| |
Sbjct 1088 TAATGGGCGGGTTTCTT-AATTTCAAAATGAAGAAATGG-TTGAGAGCTTTGATCACACG 1145
Query 1187 AAGCTGCGCAATCATCCCAACAATGATTGTTGCGCTTTTCTTTGATTCATCGGATTCTAT 1246
||||||||| ||||| ||||| || || |||||||| | |||||||||||||| |||
Sbjct 1146 AAGCTGCGCTATCATTCCAACTATTATCGTTGCGCTAGTGTTTGATTCATCGGAAGCTAC 1205
Query 1247 GCTCGACGAGCTCAA-CGAATGGCTAAATGTTCTTCAATC-AGTTCAGATCCC-TTTCGC 1303
||||| | || || ||| ||||| || || ||||| || | |||| ||||| ||| ||
Sbjct 1206 ACTCGATGT-CTTAAACGAGTGGCTTAACGTGCTTCAGTCCA-TTCAAATCCCCTTT-GC 1262
Query 1304 -CGTCAT-CCCTCTGCTCTGCTTGGTCTCCAATGACCAAATCATGGGCAGTTTCAAAATA 1361
| |||| |||| | || || ||||||||||| || ||||||||||| || ||||| ||
Sbjct 1263 AC-TCATTCCCT-TACTTTGTTTGGTCTCCAAGGAACAAATCATGGGTAGCTTCAAGATT 1320
Query 1362 CAACCATTAGTCCA-GACAATCTCATGGATTGTAGCTGCCCTTGTGATAGCCATTAATGG 1420
|| || || || ||||||| | ||| |||| ||||| || |||||| || || ||
Sbjct 1321 GGTCCTTT-GTACAAGACAATCGCGTGGCTTGTTGCTGCGCTCGTGATAATGATCAACGG 1379
Query 1421 GTATCTAATGGTGGACTTCTTCTC 1444
||||| || |||| ||||||||
Sbjct 1380 TTATCTTTTGTTGGAGTTCTTCTC 1403
> AT4G18790.1 | Symbols: NRAMP5, ATNRAMP5 | NRAMP metal ion transporter
family protein | chr4:10317785-10319660 REVERSE LENGTH=1593
Length=1593
Score = 483 bits (261), Expect = 3e-135
Identities = 892/1188 (75%), Gaps = 78/1188 (7%)
Strand=Plus/Plus
Query 200 ATTCTCAT-GGAAGAAGCTTTGGCTATTCACCGGACCTGGGTTTCTGATGAGTATCGC-T 257
|||||||| || | ||||| ||| ||||||||||||||| ||||| ||||| ||||| |
Sbjct 192 ATTCTCATGGGCA-AAGCTATGGAAATTCACCGGACCTGGATTTCTCATGAGCATCGCGT 250
Query 258 TTCATCGATCCAGGTAATCTCGAGGGCGATCTT-CAAGCTGGAGCCATCGCTGGCTACTC 316
||| | |||||||| ||| |||| || ||| || ||||| ||||| | ||||| |||||
Sbjct 251 TTC-TAGATCCAGGAAATATCGAAGGAGAT-TTACAAGCCGGAGCTGTGGCTGGTTACTC 308
Query 317 TTTGATTTGGC-TCTTGATGTGGGCTACTGC-GATTGGCCTTTTGATCCAACTTCTCTCT 374
| | | |||| |||| | ||||| || || || || ||| |||| || |||||||||
Sbjct 309 TCTCCTATGGCTTCTT-CTATGGGCGAC-GCTAATGGGACTTCTGATGCAGCTTCTCTCT 366
Query 375 GCTCGTCTCGGTGTCGCGACTGGTCGGCATCTGGCGGAG-TTGTGTCGTGAA--GAGTAT 431
|||||| |||||||||| || ||||| ||| | |||||| || |||| ||| ||||||
Sbjct 367 GCTCGTATCGGTGTCGCCACGGGTCGACATTTAGCGGAGATT-TGTC--GAAGTGAGTAT 423
Query 432 CCGACTTGGGCAAGGATGGTGCTTTGGATT-ATGGCGGAGATTGCTTTGATCGGAGCTGA 490
|| | ||||| | || |||||||| || ||||||||| |||||||||||||||||||
Sbjct 424 CCTTCGTGGGCGCGAATCTTGCTTTGG-TTCATGGCGGAGGTTGCTTTGATCGGAGCTGA 482
Query 491 TATTCAAGAAGTTATTGGTAGTGCTATAGCTAT-CAAGATCTTGTCTA-ATGGATTGGTT 548
|||||||||||| || || || || || ||| | || ||| ||| || | || || ||
Sbjct 483 TATTCAAGAAGTCATCGGAAGCGCGATCGCTCTTCA-GATTTTGACTCGAGGGTTT--TT 539
Query 549 -CCTCTTTGGGCTGGTGTTGTTATCAC-TGC-TCTTGATTGTTTCATC-TTTC-TATTTT 603
||| |||||| ||||||| | ||||| | | | ||||||| ||| | |||| |||||
Sbjct 540 ACCTATTTGGGTTGGTGTTATCATCACAT-CAT-TTGATTGCTTCTTGATTTCGTATTT- 596
Query 604 TGGAGAATTATGGAATAAGGAAACTAGAAGCTGTGTTT-GCTATTTTGATTGCAACAATG 662
|||||| | |||||| |||||| |||||| | | ||| || |||||||||| ||||||
Sbjct 597 -GGAGAAATGTGGAATGAGGAAATTAGAAGGTCT-TTTCGCGGTTTTGATTGCGACAATG 654
Query 663 GCTCTTGCATTTGCTTGGATGTTTGGTCAGACTAAACCCAGTG--GAACCGAACTCCTTG 720
|| ||| | || |||||||||||| | | ||||| || |||| ||| ||||| ||
Sbjct 655 GCGCTTTCGTTCGCTTGGATGTTTAATGAAACTAAGCCAAGTGTTGAA--GAACTA-TTC 711
Query 721 TT-GG-AGCATTGGTCCCTAAGCTCAGTTCGAGGACTATCAAACAAGCTGTTGGTGTTGT 778
| || | ||| ||| || ||| | || | ||| || | | |||||||||| |||||
Sbjct 712 ATAGGTATTATTATTCCGAAA-CTCGGATCAAAGACGATTAGAGAAGCTGTTGGAGTTGT 770
Query 779 GGGATGTATTATCATGCCTCACAATGTGTTCTTGCATTCAGCACTT-GTGCAATCCAGAG 837
||||||| | || | ||||||||||||||||||||||||||| || ||||| || || |
Sbjct 771 GGGATGTGTAATAACGCCTCACAATGTGTTCTTGCATTCAGCT-TTAGTGCAGTCTAG-G 828
Query 838 AAGTCG-ATCCTAAAAAGAGATTC-CGG-GT-CAAAGAAGCTCTCAAGTACTACTCCATT 893
||| || |||| ||| ||||| | | || ||| |||||||| || ||||| | || |
Sbjct 829 AAGACGGATCC-AAAG-GAGATAAACAGAGTTCAA-GAAGCTCTTAACTACTA-TACAAT 884
Query 894 -GAATC-TACTGGTGCTCTTGCGGTTTCCTTCATTATCAACGTCTTTGTGACCACGGTTT 951
||||| | | | || ||| ||||| ||||| ||||| | ||||| || ||||||
Sbjct 885 CGAATCGT-CAGCCGCGCTTTTTGTTTCGTTCATGATCAATTTGTTTGTAACTGCGGTTT 943
Query 952 TTGCCAA-GTCGTTTTACGGAAC-AGAGATAGCGGATACCATCGGTCTTGCAAATGCTGG 1009
| || || | |||||| ||||| | | | ||| |||| || || || | || || ||
Sbjct 944 TCGCGAAAGG-GTTTTATGGAACCAAACA-AGCTGATAGTATAGGACTGGTTAACGCGGG 1001
Query 1010 ACAGTACTTACAGGACAAATACGGTGGCGG-GTTTTTCCCGATACTGTATATATGGGCGA 1068
| | ||| |||| || ||||| || || || ||||| ||||||||| || || |||| ||
Sbjct 1002 ATATTACCTACAAGAGAAATATGGCGGTGGTGTTTT-CCCGATACTATACATTTGGGGGA 1060
Query 1069 TTGGAGTCTTAGCTGCTGGTCAGAGTAGTACCATCACAGGTACTTACGCTGGACAGTTTA 1128
|||| | ||||||||||| || || ||||| || || || ||||| |||||||||||||
Sbjct 1061 TTGGTTTATTAGCTGCTGGACAAAGCAGTACTATAACCGGGACTTATGCTGGACAGTTTA 1120
Query 1129 TAATGGGAGGGTTCTT-GAATCT-CAAGATG-AAGAAATGGGT-TAGAGCCTTAATCACA 1184
|||||| ||||||||| || ||| ||| ||| || || ||| | | ||| || || ||
Sbjct 1121 TAATGGAAGGGTTCTTAGA-TCTTCAA-ATGGAACAA-TGGCTATC-AGCTTTTATAACG 1176
Query 1185 AGAAGCTGCGCAATCATCCCAACAATGATTGTTGCGCTTTTCTTTGATTCATCGGATT-C 1243
||||||| || || | || || ||| ||||||| || | ||| | |||| || |
Sbjct 1177 AGAAGCTTTGCTATTGTACCTACTATGTTTGTTGCTATTATGTTTAACACATCCGAGGGC 1236
Query 1244 TATGCTCGACGAGCTCAACGAATGGCTAAATGTTCTTCAATCAGTT-CAGATCCCTTTCG 1302
| |||||| | | ||||||||||| || ||||||| || | | ||||| |||||||
Sbjct 1237 TC-GCTCGATGTTTTAAACGAATGGCTTAACATTCTTCAGTC-GATGCAGATTCCTTTCG 1294
Query 1303 CCGTCATCCCTCTGCTCTG-CT-TGGTCTCCAATGACCAAATCATGGG 1348
| || || ||||| | || || |||| || ||||| || ||||||||
Sbjct 1295 CGGTTATTCCTCTT-T-TGACTATGGTTTCTAATGAACATATCATGGG 1340
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88704363015
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5