BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496873 Length=1240 Score E Sequences producing significant alignments: (Bits) Value AT5G67270.1 | Symbols: ATEB1C, EB1C, ATEB1H1 | end binding prot... 1742 0.0 > AT5G67270.1 | Symbols: ATEB1C, EB1C, ATEB1H1 | end binding protein 1C | chr5:26840070-26842081 REVERSE LENGTH=1265 Length=1265 Score = 1742 bits (943), Expect = 0.0 Identities = 1165/1264 (92%), Gaps = 47/1264 (4%) Strand=Plus/Plus Query 1 ATTTTCTATCTTTGTTCTCTTCTCCTAATTTCAAAAGAGCCGTTagagagagagagaTCG 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1 ATTTTCTATCTTTGTTCTCTTCTCCTAATTTCAAAAGAGCCGTTAGAGAGAGACAGATCG 60 Query 61 TGAAAGAGCCAGAGGGAGAAACAGTTGAATCTGAGAAAATCGAAGATGGCTACGAAGATT 120 |||||| |||||| ||||||| |||||||||||||||||||||||||| ||| Sbjct 61 AGAAAGAACCAGAGAGAGAAAC--------CTGAGAAAATCGAAGATGGCTACGAACATT 112 Query 121 GGGATGATGGATTCTGCATATTTCGTCGGGAGATCGGAGATTCTGGCCTGGATTAACTCC 180 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 113 GGGATGATGGATTCTGCATATTTCGTCGGGAGATCGGAGATTCTGGCTTGGATTAACTCT 172 Query 181 ACTCTCCAACTCAATCTCTCCAAAGTTGAAGAGGCTTGTTCAGGCGCTGTTCATTGTCAG 240 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 173 ACTCTCCAACTCAATCTCTCCAAAGTCGAAGAGGCTTGTTCAGGCGCTGTTCATTGTCAG 232 Query 241 CTCATGGATTCGGTACATCCTGGAACTGTTCCGATGCATAAGGTTAACTTTGATGCCAAG 300 || ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct 233 CTGATGGATTCGGTGCATCCTGGGACTGTTCCGATGCACAAGGTTAACTTTGATGCGAAG 292 Query 301 AGTGAGTATGAGATGATTCAGAACTATAAGGTTCTTCAGGATGTGTTTAATAAGCTCAAG 360 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 293 AGTGAATATGAGATGATTCAGAACTATAAGGTTCTTCAGGATGTGTTTAATAAACTCAAG 352 Query 361 ATCACTAAGCACATTGAAGTGAGCAAACTCGTTAAGGGAAGGCCATTGGATAACTTGGAG 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 353 ATCACTAAGCACATCGAAGTGAGCAAACTCGTTAAGGGAAGGCCATTGGATAACTTGGAG 412 Query 421 TTTATGCAATGGATGAAGAAGTACTGTGATTCTGTTAATGGAGGCCAGCATAATTACCAC 480 |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 413 TTTATGCAGTGGATGAAAAAGTACTGTGATTCTGTTAATGGAGGCCAGCATAATTACCAT 472 Query 481 GCACTTGAGAGAAGAGAAGCCAGCAAAGGAGGTAAAGAAGCAACCAAGAGAGCTGCAGCA 540 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| Sbjct 473 GCACTTGAGAGAAGGGAAGCCAGCAAAGGAGGTAAAGAAGCAACGAAGAGAGCT---GCA 529 Query 541 GCTACACAACAATCAGGCAAGGGTTCTTCTTCTTCAGCTGCACCTAGACCTTCATCTTCA 600 ||||||||||||||||||||| |||| |||||||||||| ||||| |||||||||||||| Sbjct 530 GCTACACAACAATCAGGCAAGAGTTCGTCTTCTTCAGCTCCACCTCGACCTTCATCTTCA 589 Query 601 AATGGAACCCGTAAACAT--G----AA--C--C-ACA---GT-C-CTCCA----AC-ACT 639 |||||||||||||| ||| | || | | ||| || | | ||| | ||| Sbjct 590 AATGGAACCCGTAAGCATGAGCCACAATCCAACAACACCGGTACTCACCATTCTTCAACT 649 Query 640 GGGAATCACCACCACTCTTCAAAACCATCAGCTAAACAATCTAAACCAGTGCCTGCTTAT 699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 650 GGGAATCACCACCACTCTTCAAAACCATCAGCTAAACAATCTAAACCAGTGCCTGCTTAT 709 Query 700 GATGAAAAGATCACAGAACTGAAACTCTACATAGACAGCTTGGAGAAAGAGAGAGATTTC 759 |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct 710 GATGAAAAGATCACAGAACTGAAACTTTACATTGACAGCTTAGAGAAAGAGAGAGATTTC 769 Query 760 TATTTCTCTAAACTCCGAGATGTAGAGATTCTCTGCCAAAACCCAGACACAGAGCACTTA 819 ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 770 TATTTCTCTAAACTCAGAGATGTAGAGATTCTCTGTCAAAACCCAGACACAGAGCACTTA 829 Query 820 CCTCTTGTTGGTTCCATAAAAAGAATCCTATATGCAGCAGATGGAGAAGACGTTGGAGCA 879 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 830 CCTCTTGTTGGTTCCATAAAAAGAATCCTATACGCAGCAGATGGAGAAGACGTTGGAGCA 889 Query 880 GCAGCAGAACCAATACAGACTTTGAGTCCCATTGCTGAAGGATCAGAAGAAAGAAGGAAC 939 |||| ||| | | ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 890 GCAG-AGA-C-A---CAGACTTTGAGTCCCATTGCTGAAGGATCAGAAGAGAGAAGGAAC 943 Query 940 AGTGTAATAGAGTCACAGAAGAGGAAGCTCATAGTGAATCTCGACGTCGATGCTGCAGCG 999 ||||||| |||||| |||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 944 AGTGTAACAGAGTCGCAGAAGAGGAAGCTCATAGTGAATCTCGACGTAGATGTTGCAGCG 1003 Query 1000 ATTACAACACTCTCTCCGAGACAACGCCTTTCTGATGCTTCTGATGTCAAATGCAGTGGT 1059 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1004 ATTACAACACTCTCTCCAAGACAACGCCTTTCTGATGCTTCTGATGTCAAATGCAGTGGT 1063 Query 1060 TCATCTCCTCTCTTGACCTACTGAAATGAGAGTTAACTACTTACTATAATACTCTCTTAT 1119 ||||||||||||||||||| ||||||| ||||||| ||| | | || | ||||||||||| Sbjct 1064 TCATCTCCTCTCTTGACCTGCTGAAATCAGAGTTAGCTA-T-A-TA-A-TACTCTCTTAT 1118 Query 1120 AAAAAGATTCTCTCTCAGAGAATTTGCTCTATGTTTGAAAAAGATTCCCTGA-CCCTTCT 1178 |||| ||||||||||||||||| || ||||||||||||||| ||||||| | |||| || Sbjct 1119 GAAAACATTCTCTCTCAGAGAATCTGTTCTATGTTTGAAAAAAATTCCCT-ATCCCTCCT 1177 Query 1179 TATAAACATAGT--ACTAATACTCTGTTGAAAATATCATTGTTGTGATGTTTTGTGATCC 1236 |||||||||| | |||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 1178 TATAAACATACTCTACTAGTACTCTGTTGAAAATATCATTGTTGTGATGTTTTGTGGTCC 1237 Query 1237 TTAT 1240 |||| Sbjct 1238 TTAT 1241 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60943461630 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5