BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496879
Length=2172
Score E
Sequences producing significant alignments: (Bits) Value
AT5G67200.1 | Symbols: | Leucine-rich repeat protein kinase fa... 3297 0.0
AT3G50230.1 | Symbols: | Leucine-rich repeat protein kinase fa... 592 6e-168
> AT5G67200.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr5:26813725-26816566 REVERSE LENGTH=2189
Length=2189
Score = 3297 bits (1785), Expect = 0.0
Identities = 2057/2187 (94%), Gaps = 23/2187 (1%)
Strand=Plus/Plus
Query 1 aaaaaaaaaTGACACTGAAC----TT-TT---TTCTTC-TCTTCTTCATCCTCCTCCGTG 51
|||||||||||||||||||| || || |||||| |||||||||| ||||||||||
Sbjct 4 AAAAAAAAATGACACTGAACTTTTTTCTTCCCTTCTTCTTCTTCTTCATTCTCCTCCGTG 63
Query 52 TCTCCGCCGGAGCAGAGCCAAATTACTTCAACTCCTTACTTCCTTCCGACGCTGTTGCTT 111
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 64 TCTCCGCCGGAGCAGAGCCAAATTACTTCAACTCCTTACTTCCTTCCGACGCCGTTGCAT 123
Query 112 TACTCTCTTTCAAATCCACCGCCGATCTCGACAACAAGCTCTTGTATTCACTCACCGAGC 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 124 TACTCTCTTTCAAATCCACCGCCGATCTCGACAACAAGCTCTTGTATTCACTCACCGAGC 183
Query 172 GTTACGACTACTGTCAATGGCGCGGCGTCAAATGTGCTCAAGGTCGTATCGTTCGTCTTG 231
|||||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||
Sbjct 184 GTTACGACTACTGTCAATGGCGCGGCGTTAAATGTGCACAAGGACGCATCGTTCGTCTTG 243
Query 232 TTCTCTCCGGCGTTGGTCTCCGTGGCTACTTCTCTTCGGCGACTCTTAGCCGTCTTGACC 291
|||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||
Sbjct 244 TTCTCTCCGGCGTTGGTCTCCGCGGCTACTTCTCTTCAGCTACTCTTAGCCGTCTTGACC 303
Query 292 AGCTCCGAGTTCTGAGTCTCGAGAATAACTCGCTCTTTGGTCCGATTCCTGATCTTTCAC 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 304 AGCTCCGAGTTCTGAGTCTCGAGAATAACTCGCTCTTTGGTCCGATTCCTGATCTTTCAC 363
Query 352 ATCTCGTTAACCTCAAATCTCTCTTCCTTAGCCGAAATGAGTTTTCCGGTGCTTTCCCTC 411
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 364 ATCTCGTTAACCTCAAATCTCTCTTCCTTAGCCGGAATCAGTTTTCCGGTGCTTTCCCTC 423
Query 412 CGTCGATTCTCTCTCTTCACCGGTTAATGATTCTCTCCCTCTCTCGTAACAACTTCTCCG 471
|||||||||||||||| |||||||||||||||||||| | || | |||||||||||||
Sbjct 424 CGTCGATTCTCTCTCTGCACCGGTTAATGATTCTCTCTATATCCCACAACAACTTCTCCG 483
Query 472 GTTCGATTCCGTCTGAGATCAACGCTCTTGACCGGTTAACTTCATTGAATCTCGAGTTCA 531
|||||||||| |||||||||||||| |||||||||||||||||||| |||||||| || |
Sbjct 484 GTTCGATTCCCTCTGAGATCAACGCACTTGACCGGTTAACTTCATTAAATCTCGACTTTA 543
Query 532 ACCGGTTTAACGGAACTCTCCCGCCGTTAAATCAGTCGTTTCTGACGTCTTTTAACGTTT 591
||||||||||||||||||| ||| ||||||| ||||||||||||||||| || ||||| |
Sbjct 544 ACCGGTTTAACGGAACTCTACCGTCGTTAAACCAGTCGTTTCTGACGTCATTCAACGTCT 603
Query 592 CCGGTAACAATCTCACCGGGGTTATCCCCGTTACACCGACTCTATCACGATTCGATGCGT 651
|||||||||| |||||||| || ||||||||||| |||||||||||||| ||||||||||
Sbjct 604 CCGGTAACAACCTCACCGGAGTAATCCCCGTTACTCCGACTCTATCACGTTTCGATGCGT 663
Query 652 CGTCGTTTAAGTCTAACCCTGGACTCTGCGGTGAGATCATAAACAGAGCTTGCGCTTCAC 711
||||||||| ||||||||||||||||||||| |||||||| ||| |||||||||||||||
Sbjct 664 CGTCGTTTAGGTCTAACCCTGGACTCTGCGGCGAGATCATTAACCGAGCTTGCGCTTCAC 723
Query 712 GCTCGCCGTTCTTTGGTTCCACTAACAAAACGACGTCGTCAGAACCTCCGTTAGGACAAA 771
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 724 GCTCGCCGTTCTTTGGCTCCACTAACAAAACGACGTCGTCAGAAGCTCCGTTAGGACAAA 783
Query 772 GCGCTCAGGCGCAGAACGGTGGTGCGGTGATTATTTCTCCGGTGGTTACGAAGAAGAAAG 831
|||| ||||||||||| |||||||||||| |||| ||||||| ||||||||||||||||
Sbjct 784 GCGCACAGGCGCAGAATGGTGGTGCGGTGGTTATCCCTCCGGTAGTTACGAAGAAGAAAG 843
Query 832 GTAAAGAGAGTGGATTAGTTCTTGGTTCCACCGCTGGTCTCGCTTCGCTTATTGTTCTTG 891
||||||| ||||||||||| ||||||| |||||||||||||||||||||||| |||||||
Sbjct 844 GTAAAGAAAGTGGATTAGTCCTTGGTTTCACCGCTGGTCTCGCTTCGCTTATAGTTCTTG 903
Query 892 GTCTTTGCCTCGTTGTGTTCTCTCTGGTGATAAAGAAACGAAACGACGATGGAATCTATG 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 904 GTCTTTGCCTCGTTGTGTTCTCTCTGGTGATAAAGAAACGAAACGACGATGGAATATATG 963
Query 952 AACCAAATCCAAAAGGAGAAGCTTCTTTATCacaacaacaacaacaatcacaaaaccaaa 1011
||||||||||||||||||||||||| |||| | |||||||| ||||||||||||||||
Sbjct 964 AACCAAATCCAAAAGGAGAAGCTTCCTTAT--C-TCAACAACAGCAATCACAAAACCAAA 1020
Query 1012 ctccaagaacaagaacTGTTCCAGTTTTGAATTCAGATTCCGAATCTCATAAA-CGAGAA 1070
|||||||||||||| | ||||| |||||||| |||||| |||||||||| ||| ||||||
Sbjct 1021 CTCCAAGAACAAGAGCAGTTCCGGTTTTGAACTCAGATACCGAATCTCA-AAAGCGAGAA 1079
Query 1071 AAAGATGTTCAGTTTCAAGAAACAGAGCAGCGAATACCAAATAGTGGGAAT-TTAGTATT 1129
||||| ||||| ||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct 1080 AAAGAGGTTCAATTTCAAGAAACAGAGCAGCGAATACCAAATAGTGGGAATCTT-GTTTT 1138
Query 1130 CTGCGGAGAATCAAGAAGTCAAGGAATGTACACAATGGAGCAGCTAATGAGAGCTTCGGC 1189
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1139 CTGTGGAGAATCTAGAAGTCAAGGAATGTACACAATGGAGCAGCTAATGAGAGCTTCAGC 1198
Query 1190 GGAGTTATTGGGAAGAGGATCAGTGGGGATTATGTATAAGGCGGTTCTTGATAATCAGCT 1249
||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||||||||
Sbjct 1199 GGAGTTATTAGGAAGAGGATCAGTAGGGATTACGTATAAAGCGGTTCTTGATAATCAGCT 1258
Query 1250 TATTGTGACAGTGAAGAGACTAGACGCGGCTAAAACGGCGGTGACGAGTGAAGAAGCGTT 1309
||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1259 TATTGTGACGGTGAAGAGACTAGACGCTGCTAAAACGGCAGTGACGAGTGAAGAAGCGTT 1318
Query 1310 TGAGAATCATATGGAGATTGTTGGTGGACTTAGACACACCAATCTTGTCCCCATTAGAGC 1369
|||||||||||||||||||||||||||||||||||| ||||||||||| || |||||| |
Sbjct 1319 TGAGAATCATATGGAGATTGTTGGTGGACTTAGACATACCAATCTTGTTCCGATTAGATC 1378
Query 1370 TTACTTTCAATCAAACGGAGAGAGACTCATTATCTATGATTATCATCCTAATGGTAGCTT 1429
||| ||||| || |||||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct 1379 TTATTTTCAGTCCAACGGAGAGAGACTTATCATCTACGATTATCATCCTAATGGCAGCTT 1438
Query 1430 ATTCAATCTCATTCACGGTTCAAGATCTTCAAGAGCAAAGCCATTACATTGGACATCATG 1489
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1439 ATTCAATCTCATTCACGGTTCAAGATCGTCAAGAGCAAAGCCATTACATTGGACATCATG 1498
Query 1490 TTTAAAGATTGCAGAAGATGTAGCTCAAGGCTTATATTACATACACCAAACATCATCAGC 1549
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1499 TTTAAAGATTGCAGAAGATGTAGCTCAAGGCTTATATTACATCCACCAAACATCATCAGC 1558
Query 1550 ATTAGTCCATGGAAACCTAAAATCCACAAACATCCTCTTAGGACAAGACTTTGAAGCCTG 1609
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1559 ATTAGTCCATGGAAACCTAAAATCCACAAACATTCTCTTAGGACAAGACTTTGAAGCCTG 1618
Query 1610 TTTAACAGATTACTGCCTCAGTGTCTTAACAGACTCTTCATCTGCTTCACCTGATGATCC 1669
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1619 TTTAACAGATTACTGCCTCAGTGTCTTAACAGACTCTTCTTCTGCTTCACCTGATGATCC 1678
Query 1670 TGACTCATCTTCCTACAAAGCTCCTGAGATCAGAAAATCATCACGTAGACCAACTTCCAA 1729
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 TGACTCATCCTCCTACAAAGCTCCTGAGATCAGAAAATCATCACGTAGACCAACTTCCAA 1738
Query 1730 ATGTGATGTTTATTCGTTTGGTGTCTTGATCTTTGAGCTTTTGACTGGTAAGAATGCATC 1789
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1739 ATGTGATGTTTACTCGTTTGGTGTCTTGATCTTTGAGCTTTTGACTGGTAAGAATGCGTC 1798
Query 1790 GAGGCATCCGTTTATGGCGCCTCATGATATGCTTGATTGGGTTAGAGCAATGAGAGAAGA 1849
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1799 AAGGCATCCGTTTATGGCGCCTCATGATATGCTTGATTGGGTTAGAGCAATGAGAGAAGA 1858
Query 1850 AGAAGAAGGAACGGAGGATAATAGGCTGGGGATGATGACTGAAACAGCTTGTCTTTGCCG 1909
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1859 AGAAGAAGGAACAGAGGATAATAGGCTTGGGATGATGACTGAAACAGCTTGTCTTTGCCG 1918
Query 1910 TGTGACATCACCAGAGCAAAGACCAACGATGAGACAAGTGATTAAGATGATTCAGGAGAT 1969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919 TGTGACATCACCAGAGCAAAGACCAACGATGAGACAAGTGATTAAGATGATTCAGGAGAT 1978
Query 1970 TAAGGAGAGTGTTATGGCTGAAGAGAACGATCCGTTCCGGTGAAAACAAAACTTCGTAGG 2029
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||
Sbjct 1979 TAAGGAGAGTGTTATGGCTGAAGAAAACGATCCGTTCCGGTGAAAACGAAACTTCCTAGC 2038
Query 2030 TATCCTCCGAACAATTTTCTCAAGGGAGGGGGTTATTTTAGA-AAATGAGAATATAGG-T 2087
||||||||||||||||||| |||| |||||||||| |||||| ||| ||||||||||| |
Sbjct 2039 TATCCTCCGAACAATTTTCCCAAGCGAGGGGGTTAATTTAGAGAAAGGAGAATATAGGGT 2098
Query 2088 GCGTAAAATGTAATATTCTTAGGATGTGGGGTCGGAATTGTAATACCA-TTGGAATTTAG 2146
|||| || |||||| || |||| ||||||||| ||||||||||||| | |||||||||||
Sbjct 2099 GCGTGAA-TGTAATTTTGTTAGCATGTGGGGTTGGAATTGTAATAC-AGTTGGAATTTAG 2156
Query 2147 AGGACTGAA-GTCAAAGAAGTTTGCTT 2172
||||| ||| |||||||||||||||||
Sbjct 2157 AGGAC-GAAAGTCAAAGAAGTTTGCTT 2182
> AT3G50230.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:18620599-18623200 FORWARD LENGTH=1983
Length=1983
Score = 592 bits (320), Expect = 6e-168
Identities = 697/874 (80%), Gaps = 45/874 (5%)
Strand=Plus/Plus
Query 1150 AAGGAATGTACACAATGGAGCAGCTAATGAGAGCTTCGGCGGAG-TTATTGGGAAGAGGA 1208
||| |||||||||| | || ||| | ||||||||||| || ||| || || |||||||||
Sbjct 1118 AAGCAATGTACACAGTTGACCAGTTGATGAGAGCTTCAGCAGAGCTT-TTAGGAAGAGGA 1176
Query 1209 TCAGTGGGGATTATGTATAAGGCGGTTCTTGATAATCAGCTTATTGTGACAGTGAAGAGA 1268
||||| || | | |||||| ||||| | | |||||| | || ||||| |||||||||
Sbjct 1177 TCAGTAGGTACAACGTATAAAGCGGTGATGGTTAATCAAATGATCGTGACGGTGAAGAGA 1236
Query 1269 CTAGAC-GCGGCTAAAACGGCGGTGACGAGTGAAGAAGCGTTTGAGAATCATATGGAGAT 1327
| | | || | ||||| ||| | || ||||| || |||||||||||| ||||||||
Sbjct 1237 TTTG-CTCCGTCGAAAACAGCGATTACTAGTGATTTAGAGTTTGAGAATCAGATGGAGAT 1295
Query 1328 TGTTGGTGGACTT-AGACACACC-AATCTTGTCCCCATTAGAGCTTACTTT-CAATCAAA 1384
|||||||||||| || || || |||||||| || ||| |||||| ||| || |||||
Sbjct 1296 AGTTGGTGGACTTAAG-CA-TCCGAATCTTGTTCCGGTTAAAGCTTA-TTTCCAGTCAAA 1352
Query 1385 CGGAGAGAGACTCATTATCTATGATTATCATCCTAATGGTAGCT-TATTCAATCTCATTC 1443
||||||||||| | |||||||| || || |||||||| || | | |||||||| ||||
Sbjct 1353 TGGAGAGAGACTTGTCATCTATGAGTACCAACCTAATGGAAG-TCTCTTCAATCTTATTC 1411
Query 1444 ACGGTTCAAGATCTTC-AAGAGCAAAGCCATTACATTGGACATCATGTTTAAAGATTGCA 1502
| ||||| ||| | || ||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct 1412 ATGGTTCGAGAACATCAAAG-GCAAAGCCATTACATTGGACATCATGTTTGAAGATAGCA 1470
Query 1503 GAAGATGTAGCTCAAGGC-TTATATTACATACACCAAACATCATCAGC-ATTAGTCCATG 1560
|||||||||||||||| | ||| ||||||| |||||| |||||||| | | ||||||
Sbjct 1471 GAAGATGTAGCTCAAG-CATTACATTACATTCACCAA---TCATCAGCCAA-ATTCCATG 1525
Query 1561 GAAACCTAAAATCCACAAACATCCTC-TTAGGACAAGACTTTGAAGCCTGTTTAACAGAT 1619
||||||| || ||||| ||||||||| || || || ||||||||||| ||| | ||||||
Sbjct 1526 GAAACCTTAAGTCCACTAACATCCTCCTT-GGTCACGACTTTGAAGCTTGTGTCACAGAT 1584
Query 1620 TACTGCCTCAGTGTCTTAACAGACTCTTCATCTGCTTCACCTGATGATCCTGAC-TCATC 1678
|| || | ||||||||||||||||| || | | | || || |||| || ||| || ||
Sbjct 1585 TATTGTTTAAGTGTCTTAACAGACTCATC-TGTTCCTC-CCA-ATGACCCGGACATC-TC 1640
Query 1679 TTCCTACAAAGCTCCTGAGATCAGAAAATCATCACG-TAGAC--CA-ACTTCCAAATGTG 1734
|||||| ||||| || ||||| || |||||| || | ||| | | || || ||||| |
Sbjct 1641 TTCCTATAAAGCACCAGAGATAAGGAAATCAACA-GATAGTCGTCCCACGTCGAAATGCG 1699
Query 1735 ATGTTTATTCGTTTGGTGTCTTGATCTTTGAGCTTTTGACTGGTAAGAAT-GCATCGAGG 1793
||||||| ||||| || ||||| |||| ||||| ||||| ||||| || || ||||||
Sbjct 1700 ATGTTTACTCGTTCGGGGTCTTCCTCTTAGAGCTATTGACCGGTAA-AACCGCTTCGAGG 1758
Query 1794 CATCCGTTTATGGCGCCTCATGATATGCTTG-ATTGGGTTAGAGCAATGAGAG-AAGAAG 1851
|| ||| |||||| ||| | |||||| ||| ||||||| ||||||||||| | ||||||
Sbjct 1759 CAACCGATTATGGAGCCAAACGATATG-TTGGATTGGGTAAGAGCAATGAG-GCAAGAAG 1816
Query 1852 AAGAA-GG--AACGGAGGATAATAGGCTGGGGATGATGACTGAAACAGCTTGTCTTTGCC 1908
||||| || || ||| || ||| |||| | |||||||||| |||| |||||||||||||
Sbjct 1817 AAGAAAGGTCAAAGGAAGAGAATGGGCTAGAGATGATGACTCAAACGGCTTGTCTTTGCC 1876
Query 1909 GTGTGACATCACCAGAGCAAAGACCAACGATGAGACAAGTGATTAAGATGATTCAGGAGA 1968
|||| ||||| ||||||||||| || || |||| | ||||||| || |||||||| ||||
Sbjct 1877 GTGTAACATCGCCAGAGCAAAGGCCCACTATGAAAGAAGTGATCAAAATGATTCAAGAGA 1936
Query 1969 TTAAGGAGAGTGTTATG--G-CTGAAGAGAACGA 1999
|||||| ||||||| || | |||||||||||||
Sbjct 1937 TTAAGGGGAGTGTTGTGATGACTGAAGAGAACGA 1970
Score = 448 bits (242), Expect = 1e-124
Identities = 696/904 (77%), Gaps = 76/904 (8%)
Strand=Plus/Plus
Query 75 TACTTCAACTCCTTACTT-CCTTCCGACGCTGTTGC-TTTACTCTCTTTCAAATCCACCG 132
|||||| ||||||| ||| || |||||||| || || || ||||| |||||||||||||
Sbjct 82 TACTTCGACTCCTT-CTTACCATCCGACGCCGTCGCACTT-CTCTCCTTCAAATCCACCG 139
Query 133 CCGATCTCGACAACAAGC-TCTTGTATTCACTCACCGAGCGTTACGACTACTGTCAATGG 191
| |||||||||||||||| || | || || |||||||||| |||||||||||||||||||
Sbjct 140 CTGATCTCGACAACAAGCTTC-TATACTCTCTCACCGAGCCTTACGACTACTGTCAATGG 198
Query 192 CGCGGCGTCAAATG-TGCTCAAGGTCGTATCGTTCGTCTTGTTCTCTCCGGCGTTGGTCT 250
||||||||| | || | |||||| ||| ||||||||||| | ||| ||| ||||||||
Sbjct 199 CGCGGCGTCGATTGCT-CTCAAGATCGCGTCGTTCGTCTTATCCTCGACGGTGTTGGTCT 257
Query 251 CCGTGGCTACTT-CTCTTCGGCGACTCTTAGCCGTCTTGACCAGCTCCGAGTTCTGAGTC 309
||| || | || ||| ||| ||||||||| |||||||| ||||| || ||||| || |
Sbjct 258 CCGGGGA-AGTTTCTCACCGGAGACTCTTAGTCGTCTTGATCAGCTTCGTGTTCTTAGCC 316
Query 310 TCGAGAATAACTCGCTCTTTGGTCCGATTCCTGATCTTTCACATCTCGTTAACCTCAAAT 369
| ||||||||||| ||| ||| ||||||||||||| || | |||||| || ||||||
Sbjct 317 TTGAGAATAACTCAATCTCGGGTTCGATTCCTGATCTATCTCCTCTCGTCAATCTCAAAA 376
Query 370 CTCTCTTCCTTAGCC-GAAATGAGTTT-TCCGGTGCT-TTCCCTCCGTCGATTCTCTCTC 426
| || ||| ||| ||| || |||| |||||| || || | || || ||||||||||
Sbjct 377 CCCTAACCCTAAGCAAGAA-TG-GTTTCTCCGGTACTCTTTCTTCT-TCAATTCTCTCTC 433
Query 427 TTCACCGGTTAAT-GATTCTCTCCCTCTCTCGT--AACAACTTCTCCGGTTCGATTCCGT 483
||| ||||||| || || | ||| |||| ||||||||||||||| ||||||||
Sbjct 434 TTCGTCGGTTAACAGAA-CT-TGA-TCTATCGTTTAACAACTTCTCCGGTGAGATTCCGT 490
Query 484 CTGAGATCAACGCTCTTGAC-CGGTTAACTTCATTGAATCTCGAGTTCAACCGGTTTAAC 542
| | |||||| ||||| || || | | ||| || ||||||||||| || || |||||
Sbjct 491 CGGGGATCAATGCTCT-GAGTCGACTCAGTTCTTTAAATCTCGAGTTTAATCGACTTAAC 549
Query 543 GGAACTCTCCCGCCGTTAAATCAGTCGTT-TCTGACGTCTTTTAACGTTTCCGGTAACAA 601
|||||||||||||||||||||| || || ||||| || |||||||||||| |||||||
Sbjct 550 GGAACTCTCCCGCCGTTAAATCTTTC-TTCTCTGATTTCATTTAACGTTTCCAGTAACAA 608
Query 602 TCTCACCGGGGTTA-TCCCCGTTA-CACCGACTCTATCACGATTCGATGCGTCGTCGTTT 659
|||||||| ||| | || |||| || |||||| | ||||||| | ||||| ||||||
Sbjct 609 CCTCACCGGT-TTAGTTCC-GTTAACAAAGACTCTGTTACGATTCAACGCGTCTTCGTTT 666
Query 660 AAGTCTAACCCTGGACTCTGCGGTGAGATCATAAACAGAGCTTGCGCTT--CA--CG-CT 714
||| |||||||||||||||||||||||||| ||| || |||||| || || | ||
Sbjct 667 TCGTCAAACCCTGGACTCTGCGGTGAGATCATTAACCGATCTTGCGGTTTACATTCTTCT 726
Query 715 -CGCCGTTCTTTGGTTCCAC-TAA-C-AAA-ACGACGTCGTCAGA-ACCTCC-G-TTAG- 765
| |||||||||||||| || ||| | ||| || ||||| ||| | | || | | ||
Sbjct 727 TCTCCGTTCTTTGGTTC-ACCTAAACCAAACACCACGTCATCA-ACATCTTCTGCTTCTT 784
Query 766 -GACA-AAGCGC---T----CAG-GCG--CAGAACGGTGGTGC-G-G-TGATTATTTCTC 810
| | |||| | | || | | |||||||||| || | | ||||| || | |
Sbjct 785 CGTCTGAAGCACCGGTTATTCAAAGTGAACAGAACGGTGAAGCAGCGATGATTGTTCCAC 844
Query 811 CGGTGGTTACGAAGAAGAAAGGTAAAGA-GAGT-GGATTAGTTCTTGGTTCCACCGCTGG 868
||||||||| || ||| | |||| | | || || ||||||||||||| |||| |||
Sbjct 845 CGGTGGTTA--AA-AAG---GTTAAAAACG-GTTGG-TTAGTTCTTGGTTTCACCATTGG 896
Query 869 TCTCGCTTCGCTT-ATTGTTCTTGGTCTTTGCCTCGTTGTGTTCTC-TCTGGTGATAAAG 926
||||||||| || || ||||| ||||| |||||||| |||||||| | || | |||||
Sbjct 897 TCTCGCTTCT-TTGATAGTTCTAGGTCTCTGCCTCGTCGTGTTCTCGT-TGTTTATAAA- 953
Query 927 AAAC 930
||||
Sbjct 954 AAAC 957
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107730369570
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5