BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496887
Length=1750
Score E
Sequences producing significant alignments: (Bits) Value
AT5G67130.1 | Symbols: | PLC-like phosphodiesterases superfami... 2510 0.0
> AT5G67130.1 | Symbols: | PLC-like phosphodiesterases superfamily
protein | chr5:26791346-26793882 FORWARD LENGTH=1767
Length=1767
Score = 2510 bits (1359), Expect = 0.0
Identities = 1641/1770 (93%), Gaps = 48/1770 (3%)
Strand=Plus/Plus
Query 1 ATCTTCTTTACTAATCCTTTCTTCGTTTTCTCTC-A-G-G--AGGTGGGAAAAAGATTCA 55
|||||||||||||||| ||||||| ||||||||| | | | ||||||||||||||||||
Sbjct 1 ATCTTCTTTACTAATCGTTTCTTCATTTTCTCTCTAGGAGCTAGGTGGGAAAAAGATTCA 60
Query 56 ACCTTGTCTAAG-TAAAGAAAAGCAAAGCTAATCTTTTTCTTTTGCT-CCTCTCTCTTCC 113
||||||||| || |||||||| |||||||||||||||||||||| | ||||||| |||
Sbjct 61 ACCTTGTCTTAGAAAAAGAAAACCAAAGCTAATCTTTTTCTTTTG-TACCTCTCT-TTCA 118
Query 114 AGGATTAA-TTAACAAATCGATGAAGCCCGGGTTTTAGTACCTAATCATGTCTTTTGTCT 172
|||||||| |||||||||||||||||||||||||||||||||| ||| || |||||||
Sbjct 119 AGGATTAACAAAACAAATCGATGAAGCCCGGGTTTTAGTACCTAAACATCTC-TTTGTCT 177
Query 173 TGTCTTAGAAAAACCCACAGGCAACAACAGTAGATCGAACATCATTCAGATTtctctctc 232
||||| | ||||||| | | | | |||||||| |||||||||| || ||||||||
Sbjct 178 CGTCTTTG-AAAACCC-C---C--CCA-AGTAGATCCAACATCATTC--ATATCTCTCTC 227
Query 233 tctttctctctGCATAAGCTAAGGAGCGATGTCGGCGTGCATCAATGGCTTATGCAGAGC 292
|| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 228 TC--TATCTCTGCATAAGCTACGGAGCGATGTCGGCGTGCATCAATGGCTTATGCAGAGC 285
Query 293 CGTGACAGtctctcttcttcttctttctttc-ttc-ttctctttttcCTCAGCTTGTTCG 350
|||||| |||||||||||||||| ||| ||| ||| |||||||||||||||||||| ||
Sbjct 286 CGTGACTGTCTCTCTTCTTCTTC-TTC-TTCTTTCTTTCTCTTTTTCCTCAGCTTGCTCC 343
Query 351 AATGGAAATTGCCAGCTGCTGGATTCATGCTCCTCGGCCACTGATTGTGTCCCAGGTTTA 410
|||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||
Sbjct 344 AATGGAAATTGCCAGCTGCTGGATTCATGCTCCTCGGCTACTGATTGTGTCTCTGGTTTA 403
Query 411 TACTGTGGAGACTGTCCTGCCGTTGGAAGAAGTAAACCCGTCTGCACTAGAGGCCAAGCC 470
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 404 TACTGTGGAGACTGTCCTGCCGTTGGAAGAAGTAAACCCGTCTGCACAAGAGGCCAAGCC 463
Query 471 ACAATTCCAACTTCCATTATCAATGGATTGCCTTTCAACAAGTATACATGGTTGATGACT 530
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 464 ACAAGTCCAACTTCCATTATCAATGGATTGCCTTTTAACAAGTATACATGGTTGATGACT 523
Query 531 CATAATGCCTTTAGCAATGCAAATGCACCACCGTTGCCAGGTGTTGAGAGGATTACATTT 590
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 524 CATAATGCCTTTAGCAATGCAAATGCACCACTTTTGCCAGGTGTTGAGAGGATTACATTT 583
Query 591 TACAATCAAGAAGATACGATTACTAATCAGCTACAAAATGGAGTTAGAGGGCTAATGTTG 650
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 584 TACAATCAAGAAGATACTATTACTAATCAGCTACAAAATGGAGTTAGAGGGCTAATGCTG 643
Query 651 GATATGTATGACTTCAACAACGATATCTGGCTTTGCCATTCGCTTCGAGGGCAATGTTTC 710
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 644 GATATGTATGACTTCAACAATGATATCTGGCTTTGCCATTCGCTTCGAGGGCAATGTTTC 703
Query 711 AACTTCACCGCTTTTCAACCTGCAATTAACACACTGAGGGAAGTTGAGGCATTTCTGAGT 770
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 704 AACTTCACCGCTTTTCAACCTGCAATTAACATACTGAGGGAAGTTGAGGCATTTCTGAGT 763
Query 771 CAGAACCCAACAGAGATTGTTACCATCATAATTGAGGACTATGTGCACAGACCTAAAGGC 830
|| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 764 CAAAACCCAACAGAGATTGTTACCATCATAATAGAGGATTATGTGCACAGACCTAAAGGC 823
Query 831 TTATCAACTCTGTTTGCTAACGCTGGTTTGGACAAGTACTGGTTTCCTGTTTCTAAAATG 890
|||||||| |||||||| ||||||||||||||||| |||||||| |||||||| ||||||
Sbjct 824 TTATCAACACTGTTTGCCAACGCTGGTTTGGACAAATACTGGTTCCCTGTTTCGAAAATG 883
Query 891 CCTAGAAAAGGAGAAGATTGGCCTACTGTGACTGATATGGTGCAAGAGAATCATAGGCTC 950
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 884 CCTAGAAAGGGAGAAGATTGGCCTACTGTGACTGACATGGTGCAAGAGAATCATAGGCTC 943
Query 951 CTCGTTTTCACTTCTGTCGCTGCGAAAGAAGATGAAGAAGGCGTTGCTTATCAATGGAGA 1010
|| |||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct 944 CTGGTTTTCACTTCTGTTGCTGCCAAAGAAGATGAAGAAGGCGTTGCGTATCAGTGGAGA 1003
Query 1011 TACATGGTTGAAAATGAATCTGGGGACCCCGGGGTGAAGCGAGGTTCTTGTCCTAACAGA 1070
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1004 TACATGGTTGAAAATGAATCTGGGGATCCCGGAGTGAAGCGAGGTTCTTGTCCTAACAGA 1063
Query 1071 AAAGAGTCACAACCTTTAAATTCAAAAAGCTCATCGCTTTTCTTGATGAATTATTTCCCG 1130
|||||||| |||||||||||||||||||| || ||||| |||||||||||||| ||||||
Sbjct 1064 AAAGAGTCTCAACCTTTAAATTCAAAAAGTTCTTCGCTATTCTTGATGAATTACTTCCCG 1123
Query 1131 ACATATCCGGTTGAGAAAGACGCCTGCAAAGAGCACTCAGCTCCACTTGCTGAGATGGTT 1190
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1124 ACATATCCGGTTGAGAAAGACGCTTGCAAGGAGCACTCAGCTCCACTTGCTGAGATGGTT 1183
Query 1191 GGGACTTGTCTAAAGTCAGGAGGGAATAGAATGCCAAACTTTCTTGCTGTTAACTTCTAC 1250
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 GGGACTTGTCTCAAGTCAGGAGGGAATAGAATGCCAAACTTTCTTGCTGTTAACTTCTAC 1243
Query 1251 ATGAGAAGTGATGGAGGCGGCGTTTTCGAAATTCTGGATAGAATGAATGGACCAGTAGTT 1310
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 1244 ATGAGAAGTGATGGAGGCGGCGTTTTCGAAATTCTGGATAGAATGAATGGACCGGTACTT 1303
Query 1311 TGCGGTTGTGAAACTCTTGCTGCTTGCCAGCCAGGAGCAGCCTATGGTTCATGCAAAAAT 1370
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 1304 TGCGGTTGTGAAACTCTTTCTGCTTGCCAGCCAGGAGCAGCTTATGGTTCATGCAAAAAT 1363
Query 1371 GTTACTCTACAGACAAGAACTCCAAACATGGATTCAACGGCTGGAAGCAACTCAGGTGGA 1430
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1364 GTTACTGTACAGACAAGAACTCCAAGCATGGATTCAACGGCTGGAAGCAACTCAGGTGGA 1423
Query 1431 AGCTACTCAGGTTCAGTTCAGTTCTCAAGATCCTTAGCTTCTGTTGTCTATCCACC-AAA 1489
|||||||||||||||||||||||||||||||| ||||||||||| | | ||| | |||
Sbjct 1424 AGCTACTCAGGTTCAGTTCAGTTCTCAAGATCTTTAGCTTCTGTGG-C---CCAACTAAA 1479
Query 1490 CA-CTATTGTTGCCTTCTGCTTCTCATGGCTGCCATTCCTGATGTTTCTACTATGACACA 1548
|| | ||||||| |||||||||||||| ||| || || ||||| ||||||||||||||||
Sbjct 1480 CAAC-ATTGTTGTCTTCTGCTTCTCATTGCTTCCGTTGCTGATATTTCTACTATGACACA 1538
Query 1549 ACCAATCAAACCACTTGGAGAGATTATTGGGTTAGAGAATCTTGATCACTTCTTTAGAAC 1608
|||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1539 ACCAATCAAACCACGTGGAGAGATTCTTAGGTTAGAGAATCTTGATCACTTCTTTAGAAC 1598
Query 1609 GAATGAGAGATCCTAAGTTCAGGAAACATGAATTCCCTTAGAAAGAGTTTCTG-TTATGA 1667
|||||||||| |||||||| | | |||||||| |||||||||||||||||| || |||
Sbjct 1599 GAATGAGAGAGCCTAAGTT--G-A--CATGAATTGCCTTAGAAAGAGTTTCTGATT-TGA 1652
Query 1668 TTCTTGAATGGTAGAC-GCA----TA--GGCAGAAATATTGTGTATGTGTGTCTTCAGCT 1720
|||||| || |||||| ||| || ||||||||| ||||||||||||||||||||||
Sbjct 1653 TTCTTGTATTGTAGACTGCAGAGCTATAGGCAGAAATCTTGTGTATGTGTGTCTTCAGCT 1712
Query 1721 TCTGTTGAATGTTATGCAACTTATATATAT 1750
|||||||| |||||||||||||||||||||
Sbjct 1713 TCTGTTGATTGTTATGCAACTTATATATAT 1742
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 86545739580
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5