BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496892
Length=2371
Score E
Sequences producing significant alignments: (Bits) Value
AT5G67090.1 | Symbols: | Subtilisin-like serine endopeptidase ... 3483 0.0
> AT5G67090.1 | Symbols: | Subtilisin-like serine endopeptidase
family protein | chr5:26774018-26776391 REVERSE LENGTH=2374
Length=2374
Score = 3483 bits (1886), Expect = 0.0
Identities = 2213/2375 (93%), Gaps = 6/2375 (0%)
Strand=Plus/Plus
Query 1 TAATTTTTTCTTACTAACTCCAAATTTCATTTCAGTTTGAAAAGACCAGAG-GAAAAACT 59
||||| |||||||||||| ||||| ||||||||| |||||| ||||||||| |||||||
Sbjct 2 TAATTGTTTCTTACTAACACCAAAATTCATTTCACTTTGAAGAGACCAGAGAAAAAAACT 61
Query 60 TACTCAGACATGCTGATGACCGTCGTGATTCTTCTGATGATCTCCTTTTACGTAGCGATT 119
| |||||||||| |||||||||||| ||| ||||| || |||| |||| ||||||||||
Sbjct 62 TGCTCAGACATGGGGATGACCGTCGTAATTATTCTGGTGTTCTCATTTTTCGTAGCGATT 121
Query 120 GCAAAGGCGGAGACCTCTACTTACATCATCCACATGGACTTATCAGCCAAACCGTTGCCA 179
| || ||||||||||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct 122 GTAACGGCGGAGACCTCTCCTTACATCATCCACATGGACTTATCCGCTAAACCGTTGCCA 181
Query 180 TTTTCCAATCATCGGAACTGGTTTTCCACAACTCTTACTTCGGTTATAACCGATAGAAAA 239
|||||| ||||||||| |||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 182 TTTTCCGATCATCGGAGCTGGTTTTCCACAACTCTTACTTCAGTTATAACCAATAGAAAA 241
Query 240 CCAAAGATTATCTACGCTTATACTGATTCGGTTCACGGGTTTAGCGCAGTTCTCA-CAAC 298
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||
Sbjct 242 CCAAAGATTATCTACGCTTATACCGATTCGGTTCACGGGTTTAGCGCGGTTCTCACCAAC 301
Query 299 CCTCGAGCTCCAACGTCTTAAACACAAACCCGGGTATGTCTCTTTCACCAAAGATTTACC 358
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 302 TCT-GAGCTCCAACGTCTTAAACACAAACCCGGGTATGTCTCGTTCACCAAAGATTTACC 360
Query 359 GGTTAAGCTTCATACCACTTTCTCTCCGCAGTTTATTGGTCTAAATTCGACATCCGGTAC 418
||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||
Sbjct 361 GGTTAAGCTTCATACCACTTTCTCTCCAAAGTTTATCGGTTTAAATTCGACATCCGGTAC 420
Query 419 ATGGCCGGTCTCGAATTATGGAGATGGTACAGTAATCGGTATTATAGATACCGGAATTTG 478
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 421 ATGGCCGGTCTCGAATTATGGAGCTGGTATAGTAATCGGTATTATAGATACCGGAATTTG 480
Query 479 GCCCGATAGTCCCAGCTTTCACGACGATGGGGTTGGTACGGTTCCGTCTAAATGGAAAGG 538
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 481 GCCCGATAGTCCCAGCTTTCACGACGATGGGGTTGGTTCGGTTCCGTCTAAATGGAAAGG 540
Query 539 AGCATGTGAATTCAATTCCTCTTCCTTGTGCAACAAGAAACTAATTGGTGCTAGGGTATT 598
|||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||
Sbjct 541 AGCATGTGAATTCAATTCTTCTTCCTTGTGCAACAAGAAACTAATCGGTGCTAAGGTATT 600
Query 599 CAACAAGGGTTTGTTTGCCAACAACCCTGATTTGAGAGAAACCAAGATTGGTCAATACTC 658
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 601 CAACAAGGGTTTGTTCGCCAACAACCCTGATTTGAGAGAAACCAAGATTGGCCAATACTC 660
Query 659 TTCACCGTACGATACAATTGGACATGGCACTCATGTTGCGGCCATTGCAGCTGGTAATCA 718
|||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||
Sbjct 661 TTCACCGTACGATACAATCGGACACGGCACTCATGTTGCAGCCATTGCAGCTGGGAATCA 720
Query 719 CGTTAAGAACGCGTCTTACTTCTCTTACGCCCAAGGAACCGCCTCAGGAATCGCACCGCA 778
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 721 TGTTAAGAACGCGTCTTACTTCTCTTACGCCCAAGGAACCGCCTCAGGAATCGCACCACA 780
Query 779 CGCGCATCTAGCGATCTACAAAGCCGCTTGGGAAGAAGGGATCTACTCATCAGATGTAAT 838
|||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 781 CGCGCATCTAGCAATCTACAAAGCCGCGTGGGAAGAAGGGATTTACTCATCAGATGTAAT 840
Query 839 CGCAGCGATTGATCAAGCCATTCGAGATGGAGTTGATGTGATATCTCTGTCACTAGGATT 898
|||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||
Sbjct 841 CGCAGCGATTGATCAAGCGATTCGAGATGGAGTCCATGTGATATCTCTGTCGCTAGGATT 900
Query 899 GAGCTTTGAGGATGGTGACGACAGCGATGGTTTCGGTCTAGAAAATGATCCAATCGCAGT 958
||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 901 GAGTTTTGAGGATGATGACGACAATGATGGTTTCGGTCTAGAAAATGATCCAATCGCAGT 960
Query 959 GGCAGCGTTTGCAGCGATTCAAAAAGGCGTTTTTGTAGTTGCTTCAGGTGGTAATGACGG 1018
||| | |||||||||||||||||||||||||| || ||| |||| || ||||| |||||
Sbjct 961 CGCATCTTTTGCAGCGATTCAAAAAGGCGTTTTCGTGGTTACTTCCGGCGGTAACGACGG 1020
Query 1019 GCCGTATTATTGGAGTTTAATTAACGGAGCGCCGTGGATTATGACGGTTGGAGCGGGAAC 1078
||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 GCCATATTACTGGAGTTTGATTAACGGAGCGCCGTGGATTATGACGGTTGGAGCGGGAAC 1080
Query 1079 AATTGGTCGGCAATTTCAAGGAACCCTAACGTTTGGACACAGAGTTAGTTTCAATTTTCC 1138
||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 1081 AATTGGTAGGCAATTTCAAGGAACCCTAACGTTTGGAAACAGAGTTAGTTTCAGTTTTCC 1140
Query 1139 ATCTCTGTTTCCCGGAGATTTTCCTTCGGTTCAGTTTCCAGTAACTTACATCGAATCTGG 1198
|||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1141 ATCTCTGTTTCCTGGAGAGTTCCCTTCGGTTCAGTTTCCAGTAACTTACATCGAATCTGG 1200
Query 1199 CAGCGTCGAAAACAAGACTTTCGCGAACAGAATTGTTGTCTGTAATGAAAACGTAAACAT 1258
|||||| |||||||||||| |||| |||||||||||||||||||| |||||| |||||||
Sbjct 1201 CAGCGTTGAAAACAAGACTCTCGCAAACAGAATTGTTGTCTGTAACGAAAACATAAACAT 1260
Query 1259 CGGAAGTAAACTTCATCAAATCAAATCCACCGGAGCTGCAGCAGTTGTTTTAATAACAGA 1318
||| || |||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 1261 CGGTAGCAAACTTCATCAAATCAGATCCACCGGAGCTGCAGCAGTAGTTTTAATAACAGA 1320
Query 1319 TAAGTTACTTGAGGAACAAGACACTATAAAATTCCAGTTTCCGGTAGCATTCATCAGCTC 1378
||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||||
Sbjct 1321 TAAGTTACTTGAGGAGCAAGACACAATAAAATTCCAGTTTCCAGTAGCATTCATCGGCTC 1380
Query 1379 AAGACACCGAGAAACTATTGAAAGCTACGCATCAAGCAACGAAAACAACGCGACGGCAAA 1438
|| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct 1381 AAAACACCGAGAAACTATTGAAAGCTACGCATCAAGCAACAAAAACAACGCGACCGCAAA 1440
Query 1439 GCTGGAGTTTCGGAAAACAGTAATCGGGACAAAACCAGCACCAGAAGTAGGCACATACAG 1498
|||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct 1441 GCTGGAGTTTCGTAAAACGGTAATCGGGACAAAACCAGCGCCAGAAGTTGGCACATACAG 1500
Query 1499 CTCGAGAGGTCCATTCACAAGCTTCCCTCAAATCCTCAAACCGGACATTCTAGCTCCTGG 1558
||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1501 CTCAAGGGGTCCATTCACAAGCTTCCCTCAAATCCTGAAACCAGACATTCTAGCTCCTGG 1560
Query 1559 CACACTGATACTCTCCGCTTGGCCACCGGTTAAACCAGTCTCAGGAACTCAAGAACAACC 1618
||||| |||||||| |||||||| ||||| | | | || | ||||||| || || |||
Sbjct 1561 GACACTTATACTCTCTGCTTGGCCGTCGGTTGAGCAAATCACCGGAACTCGAGCACTACC 1620
Query 1619 GTTATTCAGCGGATTCAATCTCTTAACCGGGACATCAATGGCTGCACCTCACGTGGCTGG 1678
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1621 GTTATTCAGCGGATTCAATCTCTTAACCGGGACATCAATGGCTGCACCTCATGTAGCTGG 1680
Query 1679 AGTCGCCGCGCTTATAAAGCAAGTCCATCCAAATTGGAGCCCATCGGCTATAAAATCTGC 1738
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1681 AGTCGCTGCGCTTATAAAGCAAGTCCATCCAAATTGGAGTCCATCGGCTATAAAATCTGC 1740
Query 1739 AATTATGACAACGGCTTTGACTTTAGACAACCCTTTAGCCGTTGGAGCAGGACATGTGAG 1798
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1741 AATTATGACAACGGCTTTGACTTTAGACAACCCATTAGCCGTTGGAGCAGGGCATGTGAG 1800
Query 1799 TACGAACAGAGTCTTGAATCCTGGCCTAATCTATGATACAACTCCTCAAGATTTCATAAA 1858
|||||||| |||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct 1801 TACGAACAAAGTCTTAAACCCTGGCCTAATCTATGATACAACTCCACAAGATTTCATAAA 1860
Query 1859 CTTCCTTTGTCACGAGGCAAAACAATCAAGAAAATTGATCAATATCATCACAAGATCGAA 1918
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1861 CTTCCTTTGTCACGAGGCAAAACAATCAAGAAAATTGATCAATATCATCACGAGATCGAA 1920
Query 1919 TATTTCCGACGCTTGTAAAAACCCATCTCCATACCTCAATTACCCTTCAATCATTGCCTA 1978
||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1921 TATCTCCGACGCTTGTAAAAAGCCATCTCCATATCTCAATTACCCTTCAATCATTGCCTA 1980
Query 1979 CTTCACGTCCGATCAAAACGGTCCCAAGATCTTTCAGAGGACATTGACAAACGTGGGAGA 2038
||||||||| ||||||| | |||||||||||||| |||||||||||||||||||||||||
Sbjct 1981 CTTCACGTCTGATCAAAGCAGTCCCAAGATCTTTAAGAGGACATTGACAAACGTGGGAGA 2040
Query 2039 AGCAAACAGAAGCTACAGCGTGAGAGAGAGAGGCTTGAAGGGTCTAAACGTCGTCGTAGA 2098
|||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 2041 AGCAAAGAGAAGCTACATCGTGAGAGTGAGAGGCTTGAAGGGTCTAAACGTCGTCGTAGA 2100
Query 2099 ACCAAAGAGACTAGTGTTCAGCGAGAAAAACGAGAAGCTAAGTTACACTGTAAGATTAGA 2158
||||||| |||| |||||||||||||||||||||||||||| |||||||| ||||| ||
Sbjct 2101 GCCAAAGAAACTAATGTTCAGCGAGAAAAACGAGAAGCTAAGCTACACTGTGAGATTGGA 2160
Query 2159 GAGTCCGAGAGCGTTACAAGAGAACGTGGTTTATGGATTGGTGAGTTGGATTGATGAAGA 2218
|||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2161 GAGTCCAAGAGGGTTACAAGAGAACGTGGTTTATGGATTGGTGAGTTGGGTTGATGAAGA 2220
Query 2219 TGAAGCTAACTTTGAAATTAGTTGTTCTGTGGTGGCCACGAGCCTTGTCCAAGAGTCTTA 2278
||||||| | |||||| | || |||||||||||||||||||||||||||||||||||||
Sbjct 2221 TGAAGCTGAGTTTGAAGTGAGCTGTTCTGTGGTGGCCACGAGCCTTGTCCAAGAGTCTTG 2280
Query 2279 ATCTTTACTTTACAAAAGAttttttttttttGTTCTTTGGTTAAGA-TTATTCTCT-ATT 2336
||||||||||| |||||||||| |||||||| |||||||||||| | ||||||||| |||
Sbjct 2281 ATCTTTACTTTGCAAAAGATTTGTTTTTTTTCTTCTTTGGTTAA-ACTTATTCTCTTATT 2339
Query 2337 TTGTGTGATTATGTCTAAATATACAATCTTTATTC 2371
|||||||||||||| ||||||| ||||||||||
Sbjct 2340 CCGTGTGATTATGTCTGAATATACGATCTTTATTC 2374
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117720278025
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5