BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496910
Length=2442
Score E
Sequences producing significant alignments: (Bits) Value
AT5G66900.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 3620 0.0
AT5G66910.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 2122 0.0
> AT5G66900.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr5:26714764-26717788 REVERSE LENGTH=2628
Length=2628
Score = 3620 bits (1960), Expect = 0.0
Identities = 2292/2452 (93%), Gaps = 23/2452 (1%)
Strand=Plus/Plus
Query 1 TGAAAGAATGAACGATTGGGCTAGTTTGGGATTAGGTTCTATCGGGGGAGCTGTGTTTTC 60
||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||
Sbjct 25 TGAAAGAATGAACGATTGGGCTAGTTTGGGAATAGGTTCTATTGGGGAAGCTGTGTTTTC 84
Query 61 CGAGCTCTTGAAACTTGTGATTGAAGAAGCAAAAAAGGTCAAAGCTTTCAAACCCTTGTC 120
| ||||| ||||| |||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 85 CAAGCTCCTGAAAGTTGTGATTGATGAAGCAAAAAAGTTCAAAGCTTTCAAACCCTTGTC 144
Query 121 CAAAGATCTCGTATCAACAATGGAGAGATTGTTTCCGTTAACTCAAAAGATTGATTCGAT 180
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 145 CAAGGATCTCGTATCAACAATGGAGATATTGTTTCCGTTAACTCAAAAGATTGATTCGAT 204
Query 181 GCAAAAAGAGCTTGACTTTGGTGTAAAGGAACTTAAGGAACTGAGGGATACGATTGAAAG 240
||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||
Sbjct 205 GCAAAAAGAGCTTGACTTTGGTGTAAAGGAACTAAAGGAACTTAGGGATACGATCGAAAG 264
Query 241 AGCTGGTGTAGCTGTTCGAAAGTTTCCAAGCGTCAAGTGGTACGAGAAATCTAAATATAC 300
||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 265 AGCTGATGTAGCTGTTCGGAAGTTTCCAAGAGTCAAGTGGTACGAGAAATCTAAATATAC 324
Query 301 TAGAAAAATTGAGAGAATCAATGAGGATATGCTTAAGTTCTGTCAGATTGATCTTCAGCT 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 325 TAGAAAAATTGAGAGAATCAATAAGGATATGCTTAAGTTCTGTCAGATTGATCTTCAGCT 384
Query 361 TCTTCAGCATAGGAATCAGTTGACGTTGTTGGGTTTGACGGGAAATCTTGTGAATTCGGT 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 385 TCTTCAGCATAGGAATCAGTTGACGTTGTTGGGTTTGACGGGAAACCTTGTGAATTCGGT 444
Query 421 TGATGGTTTAAGTAAAAGGATGGATCTTTTGAGTGTTCATGCGCCTGTTTTTAGGGATCT 480
|||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||
Sbjct 445 TGATGGTTTAAGTAAAAGAATGGACCTTTTGAGTGTTCCTGCGCCTGTTTTTAGGGATCT 504
Query 481 TTGTTCGGTTCCCAAGCTTGATAAGGTTATTGTTGGATTGGATTGGCCATTGGGGGAGCT 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 505 TTGTTCGGTTCCCAAGCTTGATAAGGTTATTGTTGGATTGGATTGGCCATTGGGGGAGTT 564
Query 541 AAAGAAGAGACTCCTTGACAATTCCGTGGTTAGTCTCGTGGTTTCTGCTCCTCCTGGTTG 600
||||||||||||||||||| |||| ||||||| ||| |||||||||||||||||||||||
Sbjct 565 AAAGAAGAGACTCCTTGACGATTCTGTGGTTACTCTTGTGGTTTCTGCTCCTCCTGGTTG 624
Query 601 CGGGAAAACCACTCTGGTTAGTCGGCTTTGTGACGATCCAGATATCAAAGGGAAGTTCAA 660
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 625 CGGGAAAACCACGCTGGTTAGTCGGCTTTGTGACGATCCAGATATCAAAGGGAAGTTCAA 684
Query 661 GCATATCTTCTTTAGTGTTGTGTCAAGTACTCCTAACTTTAAGGTCATAGTACAGAATTT 720
|||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||||||||
Sbjct 685 GCATATCTTCTTTAATGTTGTGTCAAATACTCCTAACTTTAGGGTAATAGTACAGAATTT 744
Query 721 ACTCCAACACAACGGTTATGAA-GCACTTACATTTGAGAATGATTCTCAAGCAGAACTTG 779
|||||| ||||||||||| || ||||||||||||||||||||||||||||||||| |||
Sbjct 745 ACTCCAGCACAACGGTTAC-AATGCACTTACATTTGAGAATGATTCTCAAGCAGAAGTTG 803
Query 780 GTTTAAGAAAACTGCTAGAGGAACTTAAAGAAAATGGTCCTATATTGGTTG-TCTTGGAT 838
| |||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||
Sbjct 804 GCTTAAGAAAACTGCTGGAGGAACTTAAAGAAAATGGTCCTATATTG-TTGGTGTTGGAT 862
Query 839 GATGTGTGGCGGGGAGCGGAGTCTTTACTTCAGAAATTTCAAATTAAATTACCGGATTAT 898
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||
Sbjct 863 GATGTGTGGCGGGGAGCGGATTCTTTCCTTCAGAAATTTCAAATTAAGTTACCAAATTAT 922
Query 899 AAGATTTTGGTGACTTCTCGGTTTGACTTTCCGAGTTTTGGTTCCAGTTATCATTTGAAA 958
|||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 923 AAGATTTTGGTGACTTCTCGGTTTGACTTTCCGAGTTTTGATTCCAATTATCGTTTGAAA 982
Query 959 CCTTTGGAAGATGAAGATGCCAG-GTCCCTTCTCATTCATTGGGCATCGCGACCTTCTAA 1017
|||||||||||||| ||||| || | |||||||||||||||||||||||||||||| |||
Sbjct 983 CCTTTGGAAGATGATGATGCTAGAG-CCCTTCTCATTCATTGGGCATCGCGACCTTGTAA 1041
Query 1018 TGCGTCTCCAGATGAGTACGAAGATCTCCTCAAGAAGATATTGAAACGTTGCAATGGATT 1077
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1042 CACGTCTCCTGATGAGTACGAAGATCTCCTCCAGAAGATATTGAAACGTTGCAATGGATT 1101
Query 1078 CCCAATCGTAATTGAAGTAGTCGGCGTTTCACTCAAAGGACAATCTCTAAATACATGGAA 1137
||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||
Sbjct 1102 CCCAATCGTAATTGAAGTAGTGGGTGTTTCACTCAAAGGACGATCTCTAAATACATGGAA 1161
Query 1138 AGGTCAGGTGGAAAGCTGGTCAGAAGGGGAAAGAATTCTAGGTAATCCTCATCCAACTGT 1197
||||||||||||||||||||| |||||||||| |||||| ||||| ||| ||||||||||
Sbjct 1162 AGGTCAGGTGGAAAGCTGGTCTGAAGGGGAAAAAATTCTTGGTAAGCCTTATCCAACTGT 1221
Query 1198 GCTAGAATGTTTGCAGCCTAGCTTTGATGCCCTGGAAACCAACCTTAAAGAGTG-TTTCT 1256
||||||||||||||||||||| |||||||| ||||| |||||||||| ||||| ||| |
Sbjct 1222 GCTAGAATGTTTGCAGCCTAGTTTTGATGCTCTGGATCCCAACCTTAAGGAGTGCTTTTT 1281
Query 1257 CGGACATGGGCTCGTTTCTTGAGGACCAAAAGATACGTGCTTCAGTAATAATTGACATGT 1316
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1282 -GGACATGGGCTCATTTCTTGAGGACCAAAAGATACGTGCTTCGGTAATAATTGATATGT 1340
Query 1317 GGGTGGAATTATACGGTAAAGGTAGTAGTATCTTGTACATGAAGTACCTTGAAGACCTTG 1376
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 1341 GGGTGGAATTATACGGTAAAGGTAGTAGTATCTTGTATATG---TACCTTGAAGACCTTG 1397
Query 1377 CCTCCCAGAATCTGCTTAAACTTGTTCCTCTCGGCAGAAATGAGCACGAAGACGGTTTCT 1436
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1398 CCTCCCAGAATCTACTTAAACTTGTTCCTCTCGGCACAAATGAGCACGAAGACGGTTTCT 1457
Query 1437 ACAATGATTTCTTAGTCACTCAACATGATATCCTTAGGGAATTGGCTATCCGTCAAAGCG 1496
||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 1458 ACAATGACTTCTTAGTGACTCAACATGATATCCTTAGGGAGTTGGCTATCTGTCAAAGCG 1517
Query 1497 AATT-AACGGAAAACATAGAAAGAAAAAGACTAAATTTGGAGATAAGAGAGAATACATTT 1555
|||| || ||||||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1518 AATTTAA-GGAAAACTTAGAAAGAAAAAGACTAAATCTGGAGATACTAGAGAATACATTT 1576
Query 1556 CCAGACTGGTGTTTGAATACTATTAGTGCCTCTTTATTGTCTATCTCTACGGATGATTTG 1615
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1577 CCAGACTGGTGTTTGAATACTATTAATGCCTCTTTATTGTCTATCTCTACGGATGATTTG 1636
Query 1616 TTCTCATCGAATTGGTTGGAAATGGATTGCCCCAATGTTGAGGCTTTAGTTCTTAATGTA 1675
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 1637 TTCTCATCGAAATGGTTGGAAATGGATTGCCCCAATGTTGAGGCTTTAGTTCTAAATCTC 1696
Query 1676 TCTTCATCAGACTATGCATTGCCAAGCTTCAT-TGCTGGAATGAAGAAGCTAAAAGTTCT 1734
|||||||||||||||||||||||||||||||| | |||||||||||||||| || |||||
Sbjct 1697 TCTTCATCAGACTATGCATTGCCAAGCTTCATCT-CTGGAATGAAGAAGCTGAAGGTTCT 1755
Query 1735 AACGATCACAAATCACGGTTTTTATCCAGCAAGATTGAGCAATTTCTCGTGTCTCAGCTC 1794
|| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1756 GACAATCACAAATCACGGTTTTTATCCAGCAAGATTGAGTAATTTCTCGTGTCTCAGCTC 1815
Query 1795 ATTACCAAACCTGAAACGGATTAGATTGGAGAAAGTTTCAGTCACTTTGCTGGACATTCC 1854
|||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||
Sbjct 1816 ATTACCAAACCTGAAACGGATTAGATTGGAAAAAGTTTCAATCACTTTGCTAGACATTCC 1875
Query 1855 CCGATTGCAACT-AGGCAGTCTTAAGAAGCTATCTTTGGTCATGTGTAGTTTCGGTGAGG 1913
|| | ||||||| || ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1876 CCAACTGCAACTCAG-CAGTCTTAAGAAGCTGTCTTTGGTCATGTGTAGTTTCGGTGAGG 1934
Query 1914 TTTTCTATGAGACAGAAGAAATAGATGTCTCTAAAGCACTATCGAATTTACAAGAGATTG 1973
||||||| || |||||||| |||| ||||||||| || |||||||| |||||||||||||
Sbjct 1935 TTTTCTACGACACAGAAGATATAGTTGTCTCTAATGCTCTATCGAAATTACAAGAGATTG 1994
Query 1974 ACATAGACTATTGCTATGATCTTGATGAGTTACCTTATTGGGTCTCTGAAGTTGTTTCAT 2033
|||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||||
Sbjct 1995 ACATAGACTACTGCTATGATCTTGATGAGTTACCGTATTGGATCTCTGAAATTGTTTCAT 2054
Query 2034 TGAAGACCCTTAGCATCACAAACTGTAATAAGCTCTCTACA-CTTCCAGAAGATATGGGC 2092
||||||| |||||||||||||||||||| ||||||||| || |||||||||| ||| |||
Sbjct 2055 TGAAGACACTTAGCATCACAAACTGTAACAAGCTCTCT-CAACTTCCAGAAGCTATAGGC 2113
Query 2093 AACTTGAGTAAACTGGAAATGTTGAGGTTGTGTTCTTGTAAT-AATCTCTCTGAGTTGCC 2151
|||||||||| ||| ||| |||||||| ||||||||| || | |||||||||||| ||||
Sbjct 2114 AACTTGAGTAGACTAGAAGTGTTGAGGCTGTGTTCTTCTA-TGAATCTCTCTGAGCTGCC 2172
Query 2152 TGAAGCGACTGAGAGACTCAGCAACTTGCGGTTTCTGGATATTTCTCATTGCTTAGGATT 2211
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2173 TGAAGCGACTGAGGGACTCAGCAACTTGCGGTTTCTGGATATTTCTCATTGCTTAGGATT 2232
Query 2212 GAGAAAGTTGCCTCAAGAGATTGGCAAACTAG-AGAAGCTGAAAAAGATCTGGATGAGGA 2270
|||||||||||||||||||||||||||||| | |||| ||||||||||||| |||||| |
Sbjct 2233 GAGAAAGTTGCCTCAAGAGATTGGCAAACT-GCAGAATCTGAAAAAGATCTCGATGAGAA 2291
Query 2271 AGTATTCGGGATGCAAATTGCCGGATTCAGTGACGAATCTAGAGAATTTGGAGGTCAAAT 2330
||| |||||||||| | |||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 2292 AGTGTTCGGGATGCGAGTTGCCGGAGTCAGTGACGAATCTAGAGAATCTGGAGGTCAAAT 2351
Query 2331 GCGATGAAGAAACTGGATCCTTGTGGGAAATGTTGAAGCCAAACATGATAAATTTGAGAG 2390
|||||||||||||||||| |||||||||| | |||||||||| |||| |||||||||||
Sbjct 2352 GCGATGAAGAAACTGGATTGTTGTGGGAAAGGCTGAAGCCAAAAATGAGAAATTTGAGAG 2411
Query 2391 TTCACAAGGAGGAAACAGAGCATAACCTGAACTGGCTTCAAACGTTTTAAGT 2442
|||| ||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct 2412 TTCAGGAGGAGGAAATAGAGCATAACCTGAACTTGCTTCAAATGTTTTAAGT 2463
> AT5G66910.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr5:26718232-26721256 REVERSE LENGTH=2677
Length=2677
Score = 2122 bits (1149), Expect = 0.0
Identities = 1736/2008 (86%), Gaps = 86/2008 (4%)
Strand=Plus/Plus
Query 481 TTGTTCGGTTCCCAAGCTTGAT-A-A-GGTTATTGTTGGATTGGATTGGCCATTGGGGGA 537
|||||| ||||||||||||||| | | |||| | |||||||||||||||||||||| |||
Sbjct 606 TTGTTCTGTTCCCAAGCTTGATAATATGGTTCTGGTTGGATTGGATTGGCCATTGGTGGA 665
Query 538 GCTAAAGAAGAGACTCCTTGACAATTCCGTGGTTAGTCTCGTGGTTTCTGCTCCTCCTGG 597
||| ||||||| |||||||||||||||||| | || | ||||| |||| |||||||||
Sbjct 666 GCTGAAGAAGAAACTCCTTGACAATTCCGT-G---GT-T-GTGGTGTCTGGTCCTCCTGG 719
Query 598 TTGCGGGAAAACCACTCTGGTTAGTCGGCTTTGTGACGATCCAGATATCAAAGG-GAAGT 656
||| ||||| ||||| ||||||| | |||||||||||| ||||| ||| |||| ||| |
Sbjct 720 TTGTGGGAAGACCACGCTGGTTACTAAGCTTTGTGACGACCCAGAGATCGAAGGAGAA-T 778
Query 657 TCAAGCATATCTTCTTTAGTGTTGTGTC-AAGTACTCCTAACTTT-AAGGTCATAGTACA 714
||||| | ||||||| ||| |||||||| || ||||||||| ||| | || |||||||||
Sbjct 779 TCAAGAAAATCTTCTATAGCGTTGTGTCGAA-TACTCCTAA-TTTCAGGGCCATAGTACA 836
Query 715 GAATTTACTCCAACACAACGGTTATGAAGCACTTACATTTGA-GAATGATTCTCAAGCAG 773
|| |||||||| ||||||||| | |||| |||||||||| | |||||||||||||||
Sbjct 837 AAACTTACTCCAGGACAACGGTTGCGGAGCAATTACATTTGACG-ATGATTCTCAAGCAG 895
Query 774 -AACTTGGTTTAAGAAAACTGCTAGAGGAACTTA-AAGAAAATGGTCCTATATTGGTT-G 830
||| ||| |||||| | || || |||||||| | || || |||||| |||||| ||| |
Sbjct 896 AAAC-TGGCTTAAGAGATCTTCTGGAGGAACTCACAA-AAGATGGTCGTATATT-GTTGG 952
Query 831 TCTTGGATGATGTGTGGCGGGGAGCGGAG-TCTTTACTTCAG-AAATTTCAAATTAAATT 888
| |||||||||||||||| |||| | ||| || || |||| | |||||||||||| | ||
Sbjct 953 TGTTGGATGATGTGTGGCAGGGATCCGAGTTC-TTGCTTC-GAAAATTTCAAATTGATTT 1010
Query 889 ACCGGATTATAAGATTTTGGTGACTTCTCGGTTTGACTTTCCGAGTTT-TGGTTCCAGTT 947
||| ||||||||||||||||||||||||| |||||| ||| ||||||| ||| ||| ||
Sbjct 1011 ACCAGATTATAAGATTTTGGTGACTTCTCAGTTTGATTTTACGAGTTTATGG-CCCACTT 1069
Query 948 ATCATTTGAAACCTTTGGAAGATGAAGATGCCAGGTCCCTTCTCATTCATTGGGCATCGC 1007
| |||||| ||||||| || ||||| |||| ||||||||||||||||| |||||||| |
Sbjct 1070 ACCATTTGGTACCTTTGAAATATGAATATGCTAGGTCCCTTCTCATTCAGTGGGCATCTC 1129
Query 1008 GACCTTC-TAATGCGTCTCCAGATGAGTACGAAGATCTCCT-CAAGAAGATATTGAAACG 1065
||| || | | | |||||||||||||| |||||||| || ||| ||||||||||||||
Sbjct 1130 CACC-TCTTCACACATCTCCAGATGAGTATGAAGATCTTCTCCAA-AAGATATTGAAACG 1187
Query 1066 TTGCAATGGATTCCCAATCGTAATTGAAGTAGTCGGCGTTTCACTCAAAGGACAATCTCT 1125
||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| ||||
Sbjct 1188 TTGCAATGGATTCCCTCTCGTAATTGAAGTAGTCGGCATTTCACTTAAAGGACAAGCTCT 1247
Query 1126 AAATACATGGAAAGGTCAGGTGGAAAGCTGGTCAGAAGGGGAAAGAATTCTAGGTAATC- 1184
|| |||||||||||| |||||||||||||| |||||||||| |||||| ||||| |
Sbjct 1248 GTATTTATGGAAAGGTCAAGTGGAAAGCTGGTCTGAAGGGGAAACAATTCTTGGTAA-CG 1306
Query 1185 CTCATCCAACTGTGCTAGAATGTTTGCAGCCTAGCTTTGATGCCCTGGAAACC-AACCTT 1243
|| |||| ||||||| | || || ||||||||||||| ||| ||| |||||| | |||
Sbjct 1307 CTAATCCTACTGTGCGACAACGTCTGCAGCCTAGCTTCAATGTCCT-GAAACCTCATCTT 1365
Query 1244 AAAGAGTGTTTC-TCGGACATGGGCTCGTTTCTTGAGGACCAAAAGATACGTGCTTCAG- 1301
|||||||||||| | ||||||||| || |||||| |||||||||||||||||||||| |
Sbjct 1366 AAAGAGTGTTTCAT-GGACATGGGTTCATTTCTTCAGGACCAAAAGATACGTGCTTC-GC 1423
Query 1302 TAATAATTGACATGTGGGTGGAATTATACGGTAAAGGTAG---TAGTA-T--CTTGTACA 1355
| ||||||||||| ||| |||||||||| |||| |||||| ||||| | | || ||
Sbjct 1424 TTATAATTGACATATGGATGGAATTATATGGTAGAGGTAGTTCTAGTACTAACAAGTTCA 1483
Query 1356 TG-AAGTACCTTGAA-GACCTTGCCTCCCAGAATCTGCTTAAACTTGTTCCTCTCGGCAG 1413
|| | |||||| || || ||||| ||||||||||||||||||||||||| |||||| |
Sbjct 1484 TGTTA-TACCTT-AATGAGCTTGCTTCCCAGAATCTGCTTAAACTTGTTCATCTCGGGAC 1541
Query 1414 AAATGAGCACGAAGACGGTTTCTACAATGATTTCTTAGTCACTCAACATGATATCCTTAG 1473
|||| ||| |||||||||||| |||||||| || ||||||||||||||| |||| || ||
Sbjct 1542 AAATAAGCGCGAAGACGGTTTTTACAATGAGTTGTTAGTCACTCAACATAATATTCTGAG 1601
Query 1474 GGAATTGGCTATCCGTCAAAGCGAATTAACGGAA--AA-CATAG-AAAGAAA-AAGACTA 1528
||| |||||||| |||||| ||||| |||| || ||| | ||||||| || ||||
Sbjct 1602 GGAGTTGGCTATTTTTCAAAGTGAATT---GGAACCAATCAT-GCAAAGAAAGAA-ACTA 1656
Query 1529 AATTTGGAGATAAGAGA-GA-ATACATTTCCAGACTG-GTGTTTGAAT--A-CTATTAGT 1582
|||||||||||| |||| || | || ||||| ||| | |||||| ||| | |||||| |
Sbjct 1657 AATTTGGAGATACGAGAGGACA-AC-TTTCCGGAC-GAGTGTTTAAATCAACCTATTAAT 1713
Query 1583 GCCTC--TTTATTGTCTATCTCTACGGATGATTTGTTCTCATCGAATTGGTTGGAAATGG 1640
| ||| || |||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 1714 G-CTCGACTT-TTGTCTATCTATACGGATGATTTGTTCTCATCGAAATGGTTGGAAATGG 1771
Query 1641 ATTGCCCCAATGTTGAGGCTTTAGTTCTTAATGTATCTTCATCAGACTATGCATTGCCAA 1700
|||||||||||||||||||||||||||||||| | || |||| |||||||||||||||||
Sbjct 1772 ATTGCCCCAATGTTGAGGCTTTAGTTCTTAATATCTCCTCATTAGACTATGCATTGCCAA 1831
Query 1701 GCTTCATTGCTGGAATGAAGAAGCTAAAAGTTCTAACGATCACAAATCACGGTTTTTATC 1760
|||||||||||| ||||||||||||||| ||||| || ||| ||||||||||||||||||
Sbjct 1832 GCTTCATTGCTGAAATGAAGAAGCTAAAGGTTCTGACAATCGCAAATCACGGTTTTTATC 1891
Query 1761 CAGCAAGATTGAGCAATTTCTCGTGTCTCAGCTCATTACCAAACCTGAAACGGATTAGAT 1820
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1892 CAGCAAGATTGAGTAATTTCTCGTGTCTCAGCTCATTACCAAACCTGAAACGGATTAGAT 1951
Query 1821 TGGAGAAA-GTTTCAGTCACTTTGCTGGACATTCCCCGATTGCAACTAGGCAGTCTTAAG 1879
| || ||| |||||||||||||||||||||||||| | ||||||||| |||||||| |||
Sbjct 1952 TTGA-AAAGGTTTCAGTCACTTTGCTGGACATTCCTCAATTGCAACTCGGCAGTCTCAAG 2010
Query 1880 AAGCTATC-TTTGGTCATGTGTAGTTTCGGTGAGGTTTTCTATGAGACAGAAGAAATAGA 1938
|||||||| ||| |||||||||||||||||||||||||||| || |||||||| |||||
Sbjct 2011 AAGCTATCATTT-TTCATGTGTAGTTTCGGTGAGGTTTTCTACGACACAGAAGATATAGA 2069
Query 1939 TGTCTCTAAAGCACTATCGAATTTACAAGAGATTGACATAGACTATTGCTATGATCTTGA 1998
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2070 TGTCTCTAAAGCTCTATCGAATTTACAAGAGATTGACATAGACTACTGCTATGATCTTGA 2129
Query 1999 TGAGTTACCTTATTGGGTCTCTGAAGTTGTTTCATTGAAGACCCTTAGCATCACAAACTG 2058
||||||||| |||||| || | |||||||||||||||||||| |||||||||||||||||
Sbjct 2130 TGAGTTACCATATTGGATCCCCGAAGTTGTTTCATTGAAGACACTTAGCATCACAAACTG 2189
Query 2059 TAATAAGCTCTCTAC-ACTTCCAGAAGATAT-GGGCAACTTGAGTAAACTGGAAATGTTG 2116
||| ||||||||| | ||||||||||| ||| ||| |||||||||| ||| ||| |||||
Sbjct 2190 TAACAAGCTCTCT-CAACTTCCAGAAGCTATAGGG-AACTTGAGTAGACTAGAAGTGTTG 2247
Query 2117 AGGTTGTGTTCTTGTAAT-AATCTCTCTGAGTTGCCTGAAGCGACTGAGAGACTCAGCAA 2175
||| ||||||||||| || |||||||||||| |||||||||| |||||||||||||||||
Sbjct 2248 AGGATGTGTTCTTGT-ATGAATCTCTCTGAGCTGCCTGAAGCAACTGAGAGACTCAGCAA 2306
Query 2176 CTTGCGGTTTCTGGATATTTCTCATTGCTTAGGATTGAGAAAGTTGCCTCAAGAGATTGG 2235
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2307 CTTGCGGTCTCTGGATATTTCTCATTGCTTAGGATTGAGAAAGTTGCCTCAAGAGATTGG 2366
Query 2236 CAAACTAGAGAAGCTGAAAAAGATCTGGATGAGGAAGTATTCGGGATGCAAATTGCCGGA 2295
||||||| |||| ||| | || |||| ||||||||||| |||||||||| | ||||||||
Sbjct 2367 CAAACTACAGAAACTGGAGAATATCTCGATGAGGAAGTGTTCGGGATGCGAGTTGCCGGA 2426
Query 2296 TTCAGTGACGAATCTAGAGAATTTGGAGGTCAAATGCGATGAAGAAACTGGATCCTTGTG 2355
|||||||| | ||||||||||| ||||||||||||||||||||| |||||||| |||||
Sbjct 2427 TTCAGTGAGGTATCTAGAGAATCTGGAGGTCAAATGCGATGAAGTAACTGGATTGTTGTG 2486
Query 2356 GGAAATGTTGAAGCCA-AACATGATAAATTTGAGAGTTCACAAGGAGGAAACAGAGCATA 2414
||||| ||||| |||| || |||| ||||||||||||||||| |||||||||||||||||
Sbjct 2487 GGAAAGGTTGATGCCAGAA-ATGAGAAATTTGAGAGTTCACACGGAGGAAACAGAGCATA 2545
Query 2415 ACCTGAACTGGCTTCAAACGTTTTAAGT 2442
||||||| | ||||| ||||||||||||
Sbjct 2546 ACCTGAAGTTGCTTCTAACGTTTTAAGT 2573
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121284516720
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5