BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496924
Length=2268
Score E
Sequences producing significant alignments: (Bits) Value
AT5G66760.1 | Symbols: SDH1-1 | succinate dehydrogenase 1-1 | c... 3563 0.0
AT2G18450.1 | Symbols: SDH1-2 | succinate dehydrogenase 1-2 | c... 1515 0.0
> AT5G66760.1 | Symbols: SDH1-1 | succinate dehydrogenase 1-1 |
chr5:26653658-26657536 FORWARD LENGTH=2335
Length=2335
Score = 3563 bits (1929), Expect = 0.0
Identities = 2175/2288 (95%), Gaps = 40/2288 (2%)
Strand=Plus/Plus
Query 1 CCGTTCGCGTCTTCCTCTTTAAGGGAACTTCCTCTACGAAAAACTAATTCGTATTCTCTC 60
||||||||||||||||||| |||| ||| ||||||||| | |||||||||||||||
Sbjct 1 CCGTTCGCGTCTTCCTCTTAAAGGAAACCTCCTCTACG--CGA--AATTCGTATTCTCTC 56
Query 61 ATTTCTTCTAAGGAGATTTGCATCGAAGAAACTGATTCGCTTGTGGAACCATCAACACGA 120
|||||||||| |||||||||||||||||||||||| |||||||||||| || ||||| ||
Sbjct 57 ATTTCTTCTACGGAGATTTGCATCGAAGAAACTGACTCGCTTGTGGAATCAACAACAAGA 116
Query 121 AGATGTGGCGCTGCGTCTCTCGTGGCTTTCGAGCTCCTTCTTCAAAGACCTCTTCACTCT 180
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 117 CGATGTGGCGCTGCGTCTCTCGTGGCTTTCGAGCTCCTGCTTCAAAGACCTCTTCACTCT 176
Query 181 TTGATGGCGTCTCTGGATCTCGCTTTTCCAGATTCTTCTCCACCGGTTCTACCGATACGA 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 177 TTGATGGCGTCTCTGGATCTCGCTTTTCCAGATTCTTCTCCACTGGTTCTACCGATACGA 236
Query 241 GATCCTCTTATACGATAGTGGATCACACCTATGATGCGGTTGTGGTGGGAGCTGGTGGTG 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 237 GATCCTCTTATACGATAGTGGATCACACTTATGATGCGGTTGTGGTGGGAGCTGGTGGTG 296
Query 301 CTGGACTTAGGGCGGCGATTGGGTTATCGGAGCATGGTTTTAACACCGCTTGCATTACTA 360
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 297 CTGGTCTTAGGGCGGCGATTGGGTTATCGGAGCATGGCTTTAACACCGCTTGCATTACTA 356
Query 361 AGCTTTTCCCCACAAGGTCACATACTGTTGCTGCTCAGGGTGGTATTAATGCTGCACTGG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 357 AGCTTTTCCCCACAAGGTCACATACTGTTGCTGCTCAGGGTGGTATTAATGCTGCACTGG 416
Query 421 GAAATATGTCCGAAGATGACTGGAGATGGCACATGTATGACACTGTCAAAGGAAGTGACT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 417 GAAATATGTCCGAAGATGACTGGAGATGGCACATGTATGACACTGTCAAAGGAAGTGACT 476
Query 481 GGCTAGGTGATCAAGATGCTATCCAGTATATGTGTAGAGAGGCACCAAAAGCGGTCATCG 540
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct 477 GGCTAGGTGATCAAGATGCTATCCAGTACATGTGTAGAGAGGCACCAAAAGCAGTCATTG 536
Query 541 AACTTGAGAATTATGGGCTGCCTTTCTCTCGTACTGAAGAAGGGAAAATTTACCAGCGTG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 AACTTGAGAATTATGGGCTGCCTTTCTCTCGTACTGAAGAAGGGAAAATTTACCAGCGTG 596
Query 601 CATTTGGTGGTCAAAGTCTTGACTTTGGAAAAGGTGGTCAGGCCTATCGTTGTGCTTGTG 660
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 CATTTGGTGGTCAGAGTCTTGACTTTGGAAAAGGTGGTCAGGCCTATCGTTGTGCTTGTG 656
Query 661 CTGCGGATCGGACTGGGCATGCTCTGTTGCATACTCTCTATGGACAAGCTATGAAGCACA 720
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 657 CTGCGGATAGGACTGGTCATGCTCTGTTGCATACTCTCTATGGACAAGCTATGAAGCATA 716
Query 721 ACACACAGTTCTTTGTTGAATACTTCGCCTTGGATTTGCTTATGGCTAGTGATGGCAGTT 780
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 717 ACACACAGTTCTTTGTTGAATACTTCGCCTTGGATCTGCTCATGGCTAGTGATGGCAGTT 776
Query 781 GCCAGGGTGTAATTGCACTAAACATGGAAGATGGAACATTGCATCGTTTCCGCTCTTCAC 840
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 777 GCCAGGGTGTAATTGCACTAAACATGGAAGATGGAACATTGCATCGTTTCCGTTCTTCTC 836
Query 841 AAACAATTTTGGCAACTGGGGGGTACGGCAGAGCATACTTCTCTGCAACCTCAGCACATA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 AAACAATTTTGGCAACTGGGGGGTACGGCAGAGCATACTTCTCTGCAACCTCAGCACATA 896
Query 901 CATGCACAGGAGATGGAAATGCCATGGTTGCACGGGCCGGTCTTCCATTGCAGGACTTAG 960
|||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| |
Sbjct 897 CATGCACAGGGGATGGAAATGCAATGGTTGCACGGGCCGGTCTTCCACTGCAGGACTTGG 956
Query 961 AGTTTGTTCAATTCCATCCAACTGGTATATATGGGGCTGGATGTCTCATCACTGAAGGAT 1020
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 957 AGTTTGTTCAATTCCATCCAACTGGTATATATGGGGCCGGATGTCTCATCACCGAAGGAT 1016
Query 1021 CTCGAGGTGAAGGAGGTATCCTTAGAAACAGTGAAGGTGAACGTTTTATGGAGCGATATG 1080
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1017 CTCGAGGTGAAGGTGGTATCCTTAGAAACAGTGAAGGTGAACGTTTTATGGAACGATATG 1076
Query 1081 CTCCTACAGCCAAGGATCTTGCATCAAGAGATGTTGTCTCCAGATCCATGACTATGGAAA 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 CTCCTACAGCCAAGGATCTTGCATCAAGAGATGTTGTCTCCAGATCCATGACTATGGAAA 1136
Query 1141 TCAGGGAAGGTCGTGGTGTAGGACCGCATAAGGATCATATCTATCTCCATCTGAATCATC 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 TCAGGGAAGGTCGTGGTGTAGGACCGCATAAGGATCATATCTATCTCCATCTGAATCATC 1196
Query 1201 TTCCTCCAGAAGTTCTGAAAGAAAGGCTTCCTGGAATCTCTGAGACCGCTGCCATCTTTG 1260
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 TTCCTCCAGAAGTTCTAAAAGAAAGGCTTCCTGGAATCTCTGAGACCGCTGCCATCTTTG 1256
Query 1261 CTGGTGTTGATGTTACCAAAGAGCCAATTCCCGTCTTACCCACGGTTCATTATAACATGG 1320
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1257 CTGGTGTTGATGTTACCAAAGAGCCAATTCCTGTCTTACCCACGGTTCATTATAACATGG 1316
Query 1321 GTGGTATCCCAACAAACTACCATGGCGAGGTAGTTACCATCAAAGGCGATAATCCAGATG 1380
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1317 GTGGTATCCCAACAAACTACCATGGCGAGGTAGTTACCATCAAAGGCGATGATCCAGATG 1376
Query 1381 CAGTGGTACCTGGGCTAATGGCTGCTGGAGAGGCAGCTTGTGCATCTGTTCATGGTGCCA 1440
||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1377 CAGTGATTCCTGGGCTAATGGCTGCTGGGGAGGCAGCTTGTGCATCTGTTCATGGTGCCA 1436
Query 1441 ACAGGCTTGGTGCAAATTCACTGCTCGACATTGTCGTCTTTGGTCGTGCTTGTGCAAATA 1500
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1437 ACAGGCTTGGTGCAAATTCACTGCTCGACATTGTCGTATTTGGTCGTGCTTGTGCAAATA 1496
Query 1501 GGGTTGCGGAGATAAGCAAACCAGGGGAGAAACAGAAACCTCTTGAGAAGGATGCGGGTG 1560
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1497 GGGTTGCAGAGATAAGCAAACCAGGGGAGAAACAGAAACCTCTTGAGAAGGATGCGGGTG 1556
Query 1561 AGAAGACTATTGCATGGCTGGACAGGTTGAGAAACTCAAATGGGTCGCTTCCTACTTCAA 1620
|||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||
Sbjct 1557 AGAAGACTATTGCATGGCTGGACAGGTTGAGAAACTCAAACGGGTCTCTACCTACTTCAA 1616
Query 1621 GTATCAGATTGAACATGCAGAG-AGTTATGCAGAACAACGCAGCTGTGTTCCGCACGCAA 1679
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 1617 CTATCAGATTGAACATGCAGAGGA-TTATGCAGAACAACGCAGCTGTGTTCCGCACGCAA 1675
Query 1680 GAAACATTGGAAGAAGGTTGTCAGTTGATTGACAAGGCCTGGGAAAGTTTTGGGGATGTC 1739
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1676 GAAACATTGGAAGAAGGTTGTCAGTTGATTGACAAGGCCTGGGAAAGTTTTGGGGACGTC 1735
Query 1740 CAGGTGAAAGATCGGAGTATGATATGGAACTCTGATTTGATAGAGACATTGGAACTGGAG 1799
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1736 CAGGTGAAAGATCGGAGTATGATATGGAACTCGGATTTGATAGAGACATTGGAACTGGAG 1795
Query 1800 AACCTTTTGATAAACGCTTCCATAACAATGCATTCAGCGGAAGCACGAAAGGAAAGTAGA 1859
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1796 AACCTTTTGATAAACGCATCCATAACAATGCATTCAGCAGAAGCACGAAAGGAAAGCAGA 1855
Query 1860 GGAGCACATGCTCGGGAAGACTTCACGAAAAGAGAGGATGGAGAATGGATGAAGCATACA 1919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1856 GGAGCACATGCTCGGGAAGACTTCACGAAAAGAGAGGATGGAGAATGGATGAAGCATACA 1915
Query 1920 TTGGGATATTGGGAAGATGAGAAAGTGAGATTGGAGTATAGGCCTGTTCACATGGACACT 1979
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1916 TTGGGATATTGGGAAGATGAGAAAGTGAGATTGGATTATAGGCCTGTTCACATGGACACT 1975
Query 1980 CTCGACGATGAGATTGACACTTTCCCTCCCAAAGCTCGTGTCTATTGA--GT----AT-T 2032
|||||||||||||| ||||||||||||||||||||||||||||||||| | || |
Sbjct 1976 CTCGACGATGAGATCGACACTTTCCCTCCCAAAGCTCGTGTCTATTGATCGAGCCCATGT 2035
Query 2033 G---ATCG-AGCCC--AT-G-AATAATAATAATAATCAGGAACCCaaaaaaaaacaaaaa 2084
|| | | || | |||||||||||||||||||||||| |||||| |
Sbjct 2036 TTTTATTTTATCTGTTATCGGAATAATAATAATAATCAGGAACCCCCCAAAAAA-A---- 2090
Query 2085 GGGAATTAGGAGAAGACAAA-GGAATTATGAGCTGATGGAGCACAAAGGAGTGTTCTGAA 2143
|||||||||||||||| | | ||| ||||||||||||||||||||||||| |||||||||
Sbjct 2091 GGGAATTAGGAGAAGA-AGACGGAGTTATGAGCTGATGGAGCACAAAGGACTGTTCTGAA 2149
Query 2144 ACTGGGTTTACGTTTTTTCACCTGAAACGATGAAAATAAATTGATAGAG-GAG-AAAAAC 2201
|||||||||||||||| |||| ||||||||||||||||||||||||| ||| |||||
Sbjct 2150 ACTGGGTTTACGTTTTA-CACCAGAAACGATGAAAATAAATTGATAGAAAGAGGAAAAAA 2208
Query 2202 C-CTACAATTATTATTTTCTTTATCAGTTCCTGATACTGTTAGTCTGTTACATTCTTTGT 2260
| |||||||| ||||||||||||||||||||||| | | | |||||||||||||||
Sbjct 2209 CACTACAATTCTTATTTTCTTTATCAGTTCCTGA-A-----A-T-TGTTACATTCTTTGT 2260
Query 2261 TACTTGTT 2268
||| ||||
Sbjct 2261 TACCTGTT 2268
> AT2G18450.1 | Symbols: SDH1-2 | succinate dehydrogenase 1-2 |
chr2:7997392-8000804 REVERSE LENGTH=2020
Length=2020
Score = 1515 bits (820), Expect = 0.0
Identities = 1488/1810 (82%), Gaps = 48/1810 (3%)
Strand=Plus/Plus
Query 242 ATCCTCTTATACGATAGTGGATCACACCTATGATGCGGTTGTGGTGGGAGCTGGTGGTGC 301
||| || |||||||| || ||||| || |||||||||||||| || ||||||||||||||
Sbjct 117 ATCATCGTATACGATCGTAGATCATACATATGATGCGGTTGTTGTAGGAGCTGGTGGTGC 176
Query 302 TGGACTTAGGGCGGCGATTGGGTTATCGGAGCATGGTTTTAACACCGCTTGCATTACTAA 361
||| || || || || || || ||||| ||||||||||||||||| ||||| || |||||
Sbjct 177 TGGGCTAAGAGCAGCAATAGGATTATCAGAGCATGGTTTTAACACGGCTTGTATCACTAA 236
Query 362 GCTTTTCCCCACAAGGTCACATACTGTTGCTGCTCAGGGTGGTATTAATGCTGCACTGGG 421
|||||| || || | || ||||||||||| |||||||| ||||| |||||||| ||||
Sbjct 237 GCTTTTTCCAACTCGTTCCCATACTGTTGCAGCTCAGGGAGGTATAAATGCTGCGTTGGG 296
Query 422 AAATATGTCCGAAGATGACTGGAGATGGCACATGTATGACACTGTCAAAGGAAGTGACTG 481
|||||| | |||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct 297 TAATATGAGTGTAGATGACTGGAGATGGCATATGTATGATACTGTCAAAGGAAGTGATTG 356
Query 482 GCTAGGTGATCAAGATGCTATCCAGTATATGTGTAGAGAGGCACCAAAAGCGGTCATCGA 541
| |||||||||||||||| || ||||||||||| || || ||||||||||| || || ||
Sbjct 357 GTTAGGTGATCAAGATGCAATTCAGTATATGTGCAGGGAAGCACCAAAAGCTGTGATAGA 416
Query 542 ACTTGAGAATTATGGGCTGCC-TTTCTCTCGTACTGAAGAAGGGAAAATTTACCAGCGTG 600
||||||||||| || |||| ||| ||| | || ||||| || ||||| || || || |
Sbjct 417 GCTTGAGAATTACGGATTGCCATTT-TCTAGAACAGAAGATGGAAAAATATATCAACGAG 475
Query 601 CATTT-GGTGGTCAAAGTCTTGACTTTGGAAAAGGTGGTCAGGCCTATCGTTGTGCTTGT 659
| ||| ||||| || ||||| || ||||||| ||||||||| || |||||||| || |||
Sbjct 476 C-TTTCGGTGGCCAGAGTCTCGAGTTTGGAATAGGTGGTCAAGCATATCGTTGCGCATGT 534
Query 660 GCTGCGGATCGGACTGGGCATGCTCTGTTGCATACTCTCTATGGACAAGCTATGAAGCAC 719
||||| || || ||||||||||||||||| |||||||| ||||| ||||| ||||| |||
Sbjct 535 GCTGCTGACCGCACTGGGCATGCTCTGTTACATACTCTGTATGGCCAAGCAATGAAACAC 594
Query 720 AACACACAGTTCTTTGTTGAATACTTCGCCTTGGATTTGCTTATG-GCTAGTGATGGCAG 778
||||| || ||||||||||||||||| |||||||||||| | ||| | |||||||| |
Sbjct 595 AACACTCAATTCTTTGTTGAATACTTTGCCTTGGATTTGATAATGAAC-AGTGATGGAAC 653
Query 779 TTGCCAGGGTGTAATTGCACTAAACATGGAAGATGGAACATTGCATCGTTTCC--GC-TC 835
|| || || || |||||||| ||||||||||||||||| || |||||||||| ||
Sbjct 654 CTGTCAAGGAGTCATTGCACTGAACATGGAAGATGGAACTTTACATCGTTTCCATGCGGG 713
Query 836 TTCACAAACAATTTTGGCAACTGGGGGGTACGGCAGAGCATACTTCTCTGCAACCTCAGC 895
||| | || || ||||| || ||||| || || ||||| || ||||||||||| |||||
Sbjct 714 TTC-C--ACGATATTGGCTACCGGGGGCTATGGAAGAGCTTATTTCTCTGCAACTTCAGC 770
Query 896 ACATACATGCACAGGAGATGGAAATGCCATGGTTGCACGGGCCGGTCTTCCA-TTGCAGG 954
||||||||||||||||||||||||||| ||||||||||| ||||| || || || || |
Sbjct 771 ACATACATGCACAGGAGATGGAAATGCTATGGTTGCACGAGCCGGGCTACCGCTT-CAAG 829
Query 955 ACTTAGAGTTTGTTCAATTCCATCCAACTGGTATATATGGGGCTGGATGTCTCATCACTG 1014
| || ||||||||||| || ||||| |||||||||||||| |||||||||||||||||||
Sbjct 830 ATTTGGAGTTTGTTCAGTTTCATCCTACTGGTATATATGGAGCTGGATGTCTCATCACTG 889
Query 1015 AAGGATCTCGAGGTGAAGGAGGTATCCTTAGAAACAGTGAAGGTGA-ACGTTTTATGGAG 1073
||||| || ||||||||||||| || || ||||||||||||||||| | || |||||
Sbjct 890 AAGGAGCTAGAGGTGAAGGAGGAATTCTCAGAAACAGTGAAGGTGAGAAATTC-ATGGAT 948
Query 1074 CGATATGCTCCTACAGCCA-AGGATCTTGCATCAAGAGATGTTGTCTCCAGATCCATGAC 1132
||||||||||| || || | || |||| || |||||||||||||| || ||||| |||||
Sbjct 949 CGATATGCTCCCACGGCTAGAG-ATCTGGCTTCAAGAGATGTTGTTTCAAGATCAATGAC 1007
Query 1133 TATGGAAATCAGGGAAGGTCGTGGTGTAGGACCGCAT-AAGGATCATATCTAT-C-TCCA 1189
|||||||||| | |||| ||||||| |||||| || |||||| ||||||| | | |
Sbjct 1008 TATGGAAATCCGACAAGGACGTGGTGCAGGACCA-ATGAAGGAT--TATCTATACCTTTA 1064
Query 1190 TCTGAATC-ATCTTCCTCCAGAAGTTCTGAAAGAAAGGCTTCCTGGAATCTCTGAGACCG 1248
|| || | |||| || |||||||| || ||||| ||||| || || || ||||||||||
Sbjct 1065 -CTTAAACCATCTACCACCAGAAGTGCTTAAAGAGAGGCTACCCGGTATATCTGAGACCG 1123
Query 1249 CTGCCATCTTTGCTGGTGTTGATGTTACCAA-AGAGCCAATTCCCGTCTTACCCACGGTT 1307
| || || || |||||||| |||||||| || |||||||||||| || || || || ||
Sbjct 1124 CAGCTATATTCGCTGGTGTCGATGTTAC-AAGAGAGCCAATTCCTGTATTGCCTACTGTG 1182
Query 1308 CATTATAACATGGGTGGTAT-CCCAACAAACTACCATGGCGAGGT-AGTTAC-CATCAAA 1364
|||||||| ||||||||||| |||| ||||||||||||| ||||| | |||| | | | |
Sbjct 1183 CATTATAATATGGGTGGTATTCCCA-CAAACTACCATGGAGAGGTGA-TTACTCTT-AGA 1239
Query 1365 GGCGATAATCCAGATGCAGTGGTACCTGGGCTAATGGCTGCTGGAGAGGCAGCTTGTGCA 1424
|| ||| |||||||||| || || ||||| ||||||||||| ||||| |||||||| |||
Sbjct 1240 GGTGATGATCCAGATGCTGTAGTTCCTGGACTAATGGCTGCAGGAGAAGCAGCTTGCGCA 1299
Query 1425 TCTGTTCATGGTGCCAACAGGCTTGGTGCAAATTCACTGCTCGACATTGTCGTCTTTGGT 1484
|| |||||||| || || || ||||||||||||||||| || |||||||| || |||||
Sbjct 1300 TCGGTTCATGGCGCTAATAGACTTGGTGCAAATTCACTTCTTGACATTGTTGTTTTTGGA 1359
Query 1485 CGTGCTTGTGCAAATAGGGTTGCGGAGAT--AAGCAAACCAGGGGAGAAACAGAAACCTC 1542
| ||||||||||| || ||||| ||||| || ||||| || ||||||| ||||||||
Sbjct 1360 AGAGCTTGTGCAAACAGAGTTGCAGAGATTCAA--AAACCTGGTGAGAAACTGAAACCTC 1417
Query 1543 TTGAGAAGGATGCGGGTGAGAAGACTATTGCATGGCTGGACAGGTTGAGAAACTCAAATG 1602
| |||||||||||||||||||||| ||| | |||| ||||| | | ||||||||||| |
Sbjct 1418 TAGAGAAGGATGCGGGTGAGAAGAGTATCGAATGGTTGGACCGAATAAGAAACTCAAACG 1477
Query 1603 GGTCGCTTCCTACTTC-AAGTATCAGATTGAACATGCAGAGAGTTATGCAGAACAACGCA 1661
|||| ||||| ||||| || ||| | || |||||||| ||||| ||||| ||||| ||
Sbjct 1478 GGTCACTTCCAACTTCTAAA-ATCCGCTTAAACATGCAAAGAGTAATGCAAAACAATGCT 1536
Query 1662 GCTGTGTTCCGCACGCAAGAAACATTGGAAGAAGGTTGTCAGTTGATTGACAAGGCCTGG 1721
||||| ||||| || ||||||||| | || ||||||||| | |||||||| ||| | |||
Sbjct 1537 GCTGTTTTCCGTACACAAGAAACACTAGAGGAAGGTTGTGATTTGATTGATAAGACGTGG 1596
Query 1722 GAAAGTTTTGGGGATGTCCAGGTGAAAGATCGGAGTATGATATGGAACTCTGATTTGATA 1781
|| |||||||| |||||| | |||| ||||||||||||||||||||||| |||||||||
Sbjct 1597 GACAGTTTTGGTGATGTCAAAGTGACTGATCGGAGTATGATATGGAACTCGGATTTGATA 1656
Query 1782 GAGAC-ATTGGAACTGGAGAACCTTTTGATAAACGCTTCCATAACAATGCATTCAGCGGA 1840
|| || || ||| || ||||| |||||| | || || | ||||||||||||||| || ||
Sbjct 1657 GAAACTAT-GGAGCTAGAGAATCTTTTGGTTAATGCATGCATAACAATGCATTCTGCTGA 1715
Query 1841 AGC-ACGAAAGGAAAGTAGAGGAGCACATGCTCGGGAAGACTTCACGAAAAGAGAGGATG 1899
|| | ||| ||| ||| |||||||||||||||| || || ||||||||| | || ||||
Sbjct 1716 GGCTAGGAA-GGAGAGTCGAGGAGCACATGCTCGTGAGGATTTCACGAAACGGGACGATG 1774
Query 1900 GAGAAT-GGATGAAGCATACATTGGGATATTGGGAAGATGAGAAAGTGAGATTGGAGTAT 1958
| ||| |||||||||| |||||||| ||||||||||| | ||| |||| ||||||||||
Sbjct 1775 CA-AATTGGATGAAGCACACATTGGGGTATTGGGAAGAAGGGAATGTGAAATTGGAGTAT 1833
Query 1959 AGGCCTGTTCACATGGACACTCTCG-ACGATGAGATTGACACTTTCCCTCCCAAAGCTCG 2017
|| || || |||||| | || || | | |||||| |||||||||| ||||| ||| ||||
Sbjct 1834 AGACCAGTCCACATGAAGAC-CTTGGATGATGAGGTTGACACTTTTCCTCCTAAACCTCG 1892
Query 2018 TGTCTATTGA 2027
||| ||||||
Sbjct 1893 TGTTTATTGA 1902
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112549621890
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5