BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496927 Length=2171 Score E Sequences producing significant alignments: (Bits) Value AT5G66730.1 | Symbols: | C2H2-like zinc finger protein | chr5:... 2771 0.0 AT3G50700.1 | Symbols: AtIDD2, IDD2 | indeterminate(ID)-domain ... 592 6e-168 AT2G02080.1 | Symbols: AtIDD4, IDD4 | indeterminate(ID)-domain ... 279 6e-74 > AT5G66730.1 | Symbols: | C2H2-like zinc finger protein | chr5:26641652-26644402 REVERSE LENGTH=2284 Length=2284 Score = 2771 bits (1500), Expect = 0.0 Identities = 1761/1882 (94%), Gaps = 37/1882 (2%) Strand=Plus/Plus Query 254 AGAGAGGTCAGAGAGAGAGTTATCAGAAAAGTTTGGTGGCGGAAAGGGGaaaaaaaaGAG 313 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| Sbjct 306 AGAGAGGTCAGAGAGTGAGTTATCAGAAAAGTTTGGTGGCGGAAAGGGG---AAAAGGAG 362 Query 314 ATTTTTACGAAAAGCAGATTGACTGGTAGCTGAAGAagagagagagagagagagagaCTA 373 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 363 ATTTTTACGAAAAGCAGATTGACTGGTAGCTGAAGAAGAGAGAGAGA-A-AGAGAGACTA 420 Query 374 AACAGAGT---AGGAGGATGATAAACCCTAGATTGAGCTGAGCTGAGATTTGCTTCtttt 430 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 421 AACAGAGTAGGAGGAGGATGATAAACCCTAGATTGAGCTGAGCTGAGATTTGCTTC---T 477 Query 431 ttttttttGTGAAGGGGGAAAAAAGATT-GAATTTAGTATCTTTTTTACACATGCCGGTT 489 | ||||||| | ||||||| |||||||||||| ||| | ||||||||||| Sbjct 478 TCCTTTTTGT-------GTTCAAAGATTGGAATTTAGTATC--TTTGAAACATGCCGGTT 528 Query 490 GATTTAGATAATTCCTCTACAGTTTCCGGCGATGCAAGCGTCTCATCGACCGGAAACCAA 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 529 GATTTAGATAATTCCTCTACAGTTTCCGGCGATGCAAGCGTCTCATCGACCGGAAACCAA 588 Query 550 AATCAAACTCCCAAATCCGTCGGGAAGAAGAAACGGAATCTTCCCGGAATGCCTGATCCA 609 |||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 589 AATCTAACTCCTAAATCCGTCGGGAAGAAGAAACGGAATCTTCCTGGAATGCCTGATCCA 648 Query 610 GACGCGGAAGTGATAGCTTTGTCACCTAAAACACTTATGGCAACGAATCGATTCGTTTGC 669 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 649 GACGCTGAAGTGATAGCTTTGTCACCTAAAACACTTATGGCAACGAATCGATTCGTTTGC 708 Query 670 GAAATCTGTAACAAAGGTTTTCAACGTGACCAGAATCTTCAGCTTCATCGTCGTGGTCAC 729 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 709 GAAATCTGTAACAAAGGTTTTCAACGTGACCAGAATCTTCAGCTTCATCGTCGTGGTCAC 768 Query 730 AATCTTCCATGGAAACTTAGACAGAGATCGAGTAAAGAAGTGAGGAAGAAGGTTTATGTT 789 |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct 769 AATCTTCCATGGAAACTTCGACAGAGATCGACTAAAGAAGTGAGGAAGAAGGTTTATGTT 828 Query 790 TGTCCTGTTTCTGGTTGTGTTCATCATGACCCGTCACGTGCTCTTGGAGATCTTACTGGA 849 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 829 TGTCCTGTTTCTGGCTGTGTTCATCATGACCCTTCACGTGCTCTTGGAGATCTTACTGGA 888 Query 850 ATCAAGAAACACTTTTGTCGGAAACACGGTGAGAAGAAATTCAAGTGTGAGAAATGTTCT 909 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 889 ATCAAGAAACACTTTTGTCGGAAACACGGCGAGAAGAAATGGAAGTGTGAGAAATGTTCT 948 Query 910 AAGAAGTATGCTGTTCAATCAGATTGGAAAGCTCACTCGAAGATTTGTGGCACTAAGGAG 969 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 949 AAGAAGTATGCTGTTCAATCAGATTGGAAAGCTCATTCGAAGATTTGTGGCACCAAGGAG 1008 Query 970 TATAAATGCGATTGTGGAACTCTGTTTTCTAGGAGAGATAGCTTTATAACGCATAGAGC- 1028 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1009 TATAAATGCGATTGTGGAACTCTGTTTTCTAGGAGAGATAGCTTTATAACGCATAGAGCC 1068 Query 1029 TTTCTGTGATGCGTTGGCTGAAGAGAGTGCGAAGAATCATACTCAAAGCAAGAAACTTTA 1088 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1069 TTT-TGTGATGCCTTGGCTGAAGAGAGTGCGAAGAATCATACTCAAAGCAAGAAACTTTA 1127 Query 1089 TCCAGAAACTGTCAAAAGGAAGAATCCTGAATTTGAGCAGAAATCCCCACCCGTTGTTGA 1148 |||||||||||||| ||||||||||||||| ||||||| ||||| ||| | | |||||| Sbjct 1128 TCCAGAAACTGTCACTAGGAAGAATCCTGAAATTGAGCAAAAATCTCCAGCAGCTGTTGA 1187 Query 1149 ATCTTCTCCGTCGCTACCGCCTTCTTCTCCGCCATCGGTTGCTCTAGCTCCGGCACCAGC 1208 ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| || Sbjct 1188 GTCTTCTCCGTCATTACCGCCTTCTTCTCCGCCATCGGTTGCTATAGCTCCGGCACCGGC 1247 Query 1209 TATTTCGGTTGAGTCTGAGCCTGTCAAAATCATATCTTCCTCGGTTTTGCCGATTCAGAA 1268 ||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 1248 TATTTCGGTTGAGACTGAGTCTGTCAAAATCATATCTTCCTCTGTTTTGCCGATTCAGAA 1307 Query 1269 TTCTCCAGAATCTCCAGAAAACAACAATCACCCTGATGTCATAATCGAGGAAGCTTCAAG 1328 |||||||||||||| ||||||||||||||| ||||| ||||| || |||||||||||||| Sbjct 1308 TTCTCCAGAATCTCAAGAAAACAACAATCATCCTGAAGTCATTATTGAGGAAGCTTCAAG 1367 Query 1329 AACGATCGGTTTCAATGTTAGCTCATCCGATCTATGCAACGATCACAGTAA-A----T-- 1381 ||||||||| ||||||||||||||||| |||||| |||| ||||||||||| | | Sbjct 1368 AACGATCGGGTTCAATGTTAGCTCATCGGATCTAAGCAATGATCACAGTAACAACAATGG 1427 Query 1382 ---A--CGCAGGCTTGTTTGTATCATCAACAGCTTCGCCTAGTTTATATGCTTCCCCAAC 1436 | |||||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1428 TGGATACGCAGGTTTGTTTGTATCATCAACAGCTTCGCCTAGTTTATATGCTTCCTCAAC 1487 Query 1437 CGCTTCTCCAAGTCTATTCGCACCATCTTCCGCCTTGGAACCCATCTCTCTCCGTCTCTC 1496 ||||||||||||||||||||||||||| ||| || ||||||||||||||||| ||||||| Sbjct 1488 CGCTTCTCCAAGTCTATTCGCACCATCGTCCTCCATGGAACCCATCTCTCTCTGTCTCTC 1547 Query 1497 GACGAATCCTTCTTTGTTCGGACCAACAATACAAGATCCGCCACATTTCCTAACTCCTCT 1556 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1548 GACGAACCCTTCTTTGTTCGGACCAACAATACGAGATCCGCCACATTTCCTAACTCCTCT 1607 Query 1557 TCCTCCTCAACCGGCAATGTCAGCTACCGCGTTGCTCCAGAAAGCTGCCCAAATGGGTTC 1616 |||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||| Sbjct 1608 CCCTCCTCAACCGGCAATGTCAGCTACTGCATTGCTCCAAAAAGCTGCACAAATGGGTTC 1667 Query 1617 CACGGGATCAGGAGGTTCGTTGCTTCGCGGGTTAGGCATTGTTTCAACTACTTCTTCATC 1676 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1668 CACGGGATCAGGAGGTTCGTTGCTTCGCGGGTTAGGCATAGTTTCAACTACTTCTTCATC 1727 Query 1677 AATGGAACTCAGCAATCACGATGCGTTGTCATTAGCTCCTGGTCTTGGACTTGGACTACC 1736 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 1728 TATGGAACTCAGCAATCATGATGCATTGTCATTAGCTCCTGGTCTTGGACTTGGACTACC 1787 Query 1737 TTGTAGCAGTGGTGGTAGCGGATCGGGTCTGAAAGAGCTCATGATGGGGAATTCGTCGGT 1796 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 1788 TTGTAGCAGCGGTGGTAGCGGATCGGGTCTAAAAGAGCTCATGATGGGGAATTCATCGGT 1847 Query 1797 GTTTGGTCCCAAACAGACGACACTTGACTTTCTCGGATTAGGAAGAGCTGTTGGTAATGG 1856 ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 1848 GTTTGGTCCGAAACAGACGACACTAGACTTTCTTGGATTAGGAAGAGCTGTTGGTAATGG 1907 Query 1857 CGGTAATACCGGAGGCGGATTGTCTGCTCTGTTAACTTCTATAGGCGGTGGTGGTGGAAT 1916 |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 1908 TGGTAATACCGGAGGTGGATTGTCTGCTCTGTTAACTTCTATAGGTGGTGGAGGTGGAAT 1967 Query 1917 AGATCTGTTTGGATCTGGGGAGTTTTCAGGGAAAGACATTGGAAGAAGTTCGTAAGCGAG 1976 |||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||| Sbjct 1968 CGATCTGTTTGGATCAGGGGAGTTTTCAGGCAAAGACATTGGAAGAAGTTCGTAAGAGAG 2027 Query 1977 ACATAAGGCATGAACGTAGTAGAACAGTGTAGTATATAGTTTATCAAGTTTGTATCAGGT 2036 ||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct 2028 ACAAAAGGCATGAACGTAGTAGACCAGTGTAGTATATAGTTCATCAAGTTTGTTTCAGGT 2087 Query 2037 TTTAGATCTTTTGGTATCT-GTTTTAGTGAAAGCTTTAGTTTTATTCCCAATGTGGGTTT 2095 ||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 2088 TTTAGATGTTTTGGTATCTTGTTTTAGTGAAAGCTTTAGTTTTATTCCCAA-GTGGGTTT 2146 Query 2096 TCTCTCAAGTACATAAATCTCC 2117 |||||||||||||||||||||| Sbjct 2147 TCTCTCAAGTACATAAATCTCC 2168 Score = 322 bits (174), Expect = 9e-87 Identities = 241/270 (89%), Gaps = 17/270 (6%) Strand=Plus/Plus Query 1 GAAGGCTCCTTTTTCTTGGACAAGCC--a-aaaaa-aaaaaaaa--TTGAAGCTTTCACA 54 |||||||||||||||||||||||||| | ||||| |||||||| |||||||||||||| Sbjct 1 GAAGGCTCCTTTTTCTTGGACAAGCCAAAGAAAAAGAAAAAAAAGGTTGAAGCTTTCACA 60 Query 55 CAAAGTCTCTCACACAAGCCGCCTTA-TTTATCTT-CGGTGATTCTTCAGAGAGAAACAA 112 ||||||||| |||||||||||||||| ||| | || |||||||||||||||||||||||| Sbjct 61 CAAAGTCTCACACACAAGCCGCCTTATTTTTTTTTCCGGTGATTCTTCAGAGAGAAACAA 120 Query 113 GCCGGAAGTAGTAAGGATAACTCATCTCCGGTGGAATCTCAGCCGTTGGATCAGATCGGT 172 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 121 GCCGGAAGTAGTAAGGATAACTCGTCTCCGGTGAAATCTCAGCCGTTGGATCAGATCGGT 180 Query 173 ------TG-ATAAAAGAAGCGTGTGGAGAAGAGAG--TCTGGGTTAAATGATTATGGGAT 223 || |||||||| ||||||||||||||||| ||||||||||||||||| | ||| Sbjct 181 GGACGGTGGATAAAAGATGCGTGTGGAGAAGAGAGAGTCTGGGTTAAATGATTAAGAGAT 240 Query 224 CTCTTGGGTAATGAAGAGTTGATTTCTTTT 253 ||||||||||||||| ||||||| |||| Sbjct 241 TTCTTGGGTAATGAAGTTTTGATTTTTTTT 270 > AT3G50700.1 | Symbols: AtIDD2, IDD2 | indeterminate(ID)-domain 2 | chr3:18840411-18842950 FORWARD LENGTH=2014 Length=2014 Score = 592 bits (320), Expect = 6e-168 Identities = 525/621 (85%), Gaps = 25/621 (4%) Strand=Plus/Plus Query 481 ATGCCGGTTGATTTAGATAATTCCTCTACAGTTTCCGGCGATGCAA--G---C-GTCTCA 534 |||||||| ||||||||||| ||||| ||||||||||| || |||| | | ||||| Sbjct 535 ATGCCGGTAGATTTAGATAACTCCTCCACAGTTTCCGGTGAAGCAAGTGTTTCAATCTCA 594 Query 535 TCGACCGGAAACCAAAATCAAACTCCCAAA-TCCGTCGGGAAGAAGAAACGGAATCTTCC 593 || |||||||||||||| | ||| ||||| ||| ||| ||||||||||| || | ||| Sbjct 595 TCCACCGGAAACCAAAA-CCCACTTCCAAACTCCACCGGAAAGAAGAAACGTAA-CCTCC 652 Query 594 C-GGAATGCCTGATCCAGACG-CGGAAGTGATAGCTTTGTCACCTAAAACACTTA-TGGC 650 | || |||||||||||||| | | ||||| |||||||| ||||| |||||| ||| | || Sbjct 653 CTGGCATGCCTGATCCAGA-GTCAGAAGTTATAGCTTTATCACCAAAAACA-TTACTAGC 710 Query 651 AACGAATC-GATTCGTTTGCGAAATCTGTAACAAAGGTTTTCAACGTGACCAGAATCTTC 709 ||| || | |||| ||||| ||||||||||||||||| |||||| | ||||||||||||| Sbjct 711 AAC-AAACAGATTTGTTTGTGAAATCTGTAACAAAGGGTTTCAAAGAGACCAGAATCTTC 769 Query 710 AGCTTCATCGTCGTGGTCACAATCTT-CCATGGAAACTTAGACAGAGATCGAGTAAAGAA 768 | |||||||||||||| |||||| || |||||||| ||| | |||| ||| | |||||| Sbjct 770 AACTTCATCGTCGTGGACACAAT-TTACCATGGAAGCTTCGTCAGAAATCAAACAAAGAA 828 Query 769 GTGAGGAAGAAGGTTTATGTTTGTCCTG-TTTCTGGTTGTGTTCATCATGACCCGTCACG 827 |||| ||| || || ||||||||||||| | | ||||||||||||| ||||| ||||| Sbjct 829 GTGAAGAAAAAAGTCTATGTTTGTCCTGAAGT-TAGTTGTGTTCATCACGACCCTTCACG 887 Query 828 TGCTCTT-GGAGATCTTACTGGAATCAAGAAACACTTTTGTCGGAAACACGGTGAGAAGA 886 |||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 888 TGCT-TTAGGAGATCTAACTGGAATCAAGAAACACTTTTGTCGGAAACATGGTGAGAAGA 946 Query 887 AATTCAAGTGTGAGAAATGTTCTAAGAAGTATGCTGTTCAATCAGATTGGAAAGCTCACT 946 | | || ||||| |||||||||||||| || ||||||||||| |||||||||||||| | Sbjct 947 AGTGGAAATGTGATAAATGTTCTAAGAAATACGCTGTTCAATCTGATTGGAAAGCTCATT 1006 Query 947 CGAAGATTTGTGGCACTAAGGAGTATAAATGCGATTGTGGAACTCTGTTTTCTAGGAGAG 1006 | ||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||| | Sbjct 1007 CCAAGATTTGTGGTACTAAAGAGTATAAATGTGATTGTGGTACTCTGTTTTCTAGGAGGG 1066 Query 1007 ATAGCTTTATAACGCATAGAGCTTTCTGTGATGCGTTGGCTGAAGAGAGTGCGA-A-GA- 1063 |||| |||||||||||||||||||| |||||||| ||||||||||| | ||||| | | Sbjct 1067 ATAGTTTTATAACGCATAGAGCTTTTTGTGATGCTTTGGCTGAAGAAAATGCGAGAAGTC 1126 Query 1064 ATCATACTCAAAGCAAGAAAC 1084 |||||| ||| || ||||||| Sbjct 1127 ATCATAGTCAGAGTAAGAAAC 1147 Score = 76.8 bits (41), Expect = 8e-13 Identities = 44/45 (98%), Gaps = 1/45 (2%) Strand=Plus/Plus Query 304 aaaaaaaGAGA-TTTTTACGAAAAGCAGATTGACTGGTAGCTGAA 347 ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 315 AAAAAAAGAGATTTTTTACGAAAAGCAGATTGACTGGTAGCTGAA 359 > AT2G02080.1 | Symbols: AtIDD4, IDD4 | indeterminate(ID)-domain 4 | chr2:518159-521707 REVERSE LENGTH=1844 Length=1844 Score = 279 bits (151), Expect = 6e-74 Identities = 375/482 (78%), Gaps = 19/482 (4%) Strand=Plus/Plus Query 592 CCCGGAATGCCTGATCCAGACGCGGAAGTGATAGCTTTGTCACCTAAA-ACACTTATGGC 650 ||||||| || |||| || ||||||||| |||| || || || ||| ||||| ||||| Sbjct 302 CCCGGAAACCCAAATCCTGATGCGGAAGTGGTAGCATTATCTCC-AAAGACACTAATGGC 360 Query 651 AACGAATC-GATTCGTTTGCGAAATCTGTAACAAAGGTTTTCAACGTGACCAGAATCTTC 709 || || | ||||| | ||||| | ||||||||||| |||||| | || || ||||| | Sbjct 361 TAC-AAACAGATTCATATGCGATGTATGTAACAAAGGGTTTCAAAGAGAACAAAATCTAC 419 Query 710 AGCTTCATCGTCGTGGTCACAATCTTCCATGGAAACTTAGACAGAGATCGAGTAAAGAAG 769 ||||||| || | || |||||||| |||||||| || | ||| | ||| | ||||||| Sbjct 420 AGCTTCACCGAAGAGGACACAATCTCCCATGGAAGCTGAAACAAAAATCAACCAAAGAAG 479 Query 770 TGAGGAAGAAGGTTTATGTTTGTCCTGTTTC-TGGTTGTGTTCATCATGACCCGTCACGT 828 ||| || ||| || ||| ||||||| | | | || ||||| ||||||||||||||| Sbjct 480 TGAAGAGGAAAGTGTATCTTTGTCCGGAGCCAACG-TGCGTTCACCATGACCCGTCACGT 538 Query 829 GCTCTTGGAGATCTTACTGGAATCAAGAAACACTT-TTGTCGGAAACACGGTGAGAAGAA 887 ||||| ||||| || || ||||||||||| || || || || ||||| || || ||||| Sbjct 539 GCTCTCGGAGACCTCACCGGAATCAAGAAGCA-TTATTACCGTAAACATGGCGAAAAGAA 597 Query 888 ATTCAAGTGTGAGAAATGTTCTAAGAAG-TATGCTGTTCAATCAGATTGGAAAGCTCACT 946 | || |||||||||||||||||| | || |||||||||||||||||||||||||||| Sbjct 598 GTGGAAATGTGAGAAATGTTCTAAG-CGTTACGCTGTTCAATCAGATTGGAAAGCTCACT 656 Query 947 CGAAGATTTGTGGCACTAAGGAGTATAAATGCGATTGTGGAACTC-TGTTTTCTAGGA-G 1004 | |||| |||||| ||||| |||||| ||| || ||||| || | | || ||||| | | Sbjct 657 CTAAGACTTGTGGTACTAAAGAGTATCGATGTGACTGTGGTAC-CATCTTCTCTAG-ACG 714 Query 1005 AGATAGCTTT-ATAACGCATAGAGCTTTCTGTGATGCGTTGGCTG-AAGAGAGTGCGAAG 1062 ||||| || || |||||||| |||||||| ||||| ||| | |||||| ||| ||| Sbjct 715 TGATAG-TTACATCACGCATAGGGCTTTCTGCGATGCATTGA-TACAAGAGACTGC-AAG 771 Query 1063 AA 1064 || Sbjct 772 AA 773 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 107680169025 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5