BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496930 Length=1341 Score E Sequences producing significant alignments: (Bits) Value AT5G66710.1 | Symbols: | Protein kinase superfamily protein | ... 1977 0.0 > AT5G66710.1 | Symbols: | Protein kinase superfamily protein | chr5:26636609-26638794 FORWARD LENGTH=1448 Length=1448 Score = 1977 bits (1070), Expect = 0.0 Identities = 1221/1293 (94%), Gaps = 13/1293 (1%) Strand=Plus/Plus Query 1 ATGAGAGCTCGCGGGTATCAACGAGCTCCGTCAATGGAGGAACCAACGGAGA-T-TCCGA 58 |||||| ||||||||||||||||||||||||||||| || ||||||| ||| | ||||| Sbjct 1 ATGAGACCTCGCGGGTATCAACGAGCTCCGTCAATGCAGAAACCAAC--AGATTATCCGA 58 Query 59 CGGATAAGACGCTTCATCCAAATTACCCATTTCTGATGTCCTCACATGGTCTCAAGTCCT 118 ||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct 59 CGGATAAGACGCTTCATCCGAATTACCCATTTCTCATGTCCTCTCATGGTCTCAAGTCCT 118 Query 119 TTGAAACGgacgacgacgacgacgacTCAAACCTCGAGTCCAACGATCAATTCGCTTTCA 178 ||||| |||||||||| ||||||||||| | ||| |||||||||||||||||||||| Sbjct 119 TTGAATCGGACGACGAAGACGACGACTCCGA-CTC--CTCCAACGATCAATTCGCTTTCA 175 Query 179 GTATCAGCACAGACTTGCTTGTCGATGTCAAAGACGTATCCATAGAGGAAGTAATCGGCG 238 ||||| |||||| ||||||||||||||||||||| |||| |||| ||| | ||||||| Sbjct 176 CTATCAACACAGAGTTGCTTGTCGATGTCAAAGACATATCTATAGGGGACTTCATCGGCG 235 Query 239 AAGGTTCATCTTCTA-TAGTCTACAAAGGATTGTTCATGAGATTTATCCCTGTGTCTGTG 297 |||||||||| |||| | ||||||| ||||||||||| |||| || |||||||||||||| Sbjct 236 AAGGTTCATCATCTACT-GTCTACAGAGGATTGTTCAGGAGAGTTGTCCCTGTGTCTGTG 294 Query 298 AAGATATTCCAGCCTAAAAGAACATCTGCTGTAAGCATTGAGCAGAAGAAGAAGTTTCAA 357 |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct 295 AAGATATTCCAGCCTAAAAGAACATCTGCTTTAAGCATTGAGCAGAGGAAGAAGTTTCAG 354 Query 358 AGAGAGGTTTTGCTGCTTTCCAAGTTTAAACATGAAAACATTGTGCAGTTCATTGGGGCG 417 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 355 AGAGAGGTTTTGCTGCTTTCCAAGTTTAGACATGAAAACATTGTGCGGTTCATTGGGGCG 414 Query 418 TGCATAGAACCAAAGTTGATGATAATTACTGAACTCATGGAAGGCAATACTCTTCAGAAG 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 415 TGCATAGAACCAAAGTTGATGATAATTACTGAACTCATGGAAGGCAATACTCTTCAGAAG 474 Query 478 TTTATGCTGAGTACTCGTCCAAAGCCTCTTGATCTGAAGCTCTCGATTAGCTTTGCATTG 537 |||||| ||||| |||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 475 TTTATGTTGAGTGTTCGTCCAAAGCCTCTTGATCTGAAGCTCTCCATTAGCTTTGCGTTG 534 Query 538 GATATTGCTCGGGGAATGGAGTTCTTGAATGCAAATGGCATCATTCATCGCGATTTGAAG 597 ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct 535 GATATTGCTCGGGGAATGGAGTTCTTGAATGCAAATGGCATTATTCACCGAGATTTGAAA 594 Query 598 CCAAGTAATATGCTCTTAACAGGTGATCAGAAACGTGTAAAGTTGGCTGATTTTGGACTT 657 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 595 CCAAGTAATATGCTCTTAACAGGTGATCAGAAACATGTAAAGTTGGCTGACTTTGGACTT 654 Query 658 GCTAGAGAGGAGACTAAAGGTTTCATGACCTGTGAGGCTGGTACATACAGATGGATGGCT 717 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 655 GCTAGAGAGGAGACTAAAGGTTTCATGACCTTTGAGGCTGGTACATACAGATGGATGGCT 714 Query 718 CCAGAGCTATTCAGCTATGACCCACTTCAAATTGGCGAAAAGAAACACTACGATCATAAG 777 |||||| |||||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct 715 CCAGAGTTATTCAGCTATGACACGCTTGAAATTGGCGAAAAGAAACACTACGATCATAAG 774 Query 778 GTGGACGTTTACAGTTTCGCCATTGTTTTCTGGGAGTTACTTACCAACAAAACCCCATTC 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 775 GTGGACGTTTACAGTTTCGCCATTGTTTTCTGGGAGTTACTTACCAACAAAACCCCATTC 834 Query 838 AAAGGAAAGAACAACATCTTTGTAGCTTATGCTGCCAGCAAAAACCAGAGACCAAGTGTG 897 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 835 AAAGGAAAGAACAACATCTTTGTAGCTTATGCTGCCAGCAAAAACCAGAGACCAAGTGTG 894 Query 898 GAAAATCTTCCAGAAGGAGTTGCTTCTATCCTGCAATCATGCTGGGCAGAGGATCCTGAC 957 || |||||||||||||| |||| |||||||||||||||||||||||||||| |||||||| Sbjct 895 GAGAATCTTCCAGAAGGCGTTGTTTCTATCCTGCAATCATGCTGGGCAGAGAATCCTGAC 954 Query 958 GCTCGTCCTGAGTTTAAAGAGATTACAGT-TTCACTAACAAACTTGCTCAGAAGCTTAAG 1016 |||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||| Sbjct 955 GCTCGTCCTGAGTTTAAAGAAATTACA-TATTCACTAACAAACTTGCTCAGAAGCTTAAG 1013 Query 1017 CTCAGACACTGATGCCACTTCATCCAATAGCAAAACCAATATAGCTACCGAGGATTCAAC 1076 ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1014 CTCAGACACTGATGCTACTTCATCCAATAGCAAAGCCAATATAGCTACCGAGGATTCAAC 1073 Query 1077 AAGCAGTCTGGTTCAAGAACGTGTTGTCTGTGATTGTCCCGGACTAAAGATGACCAAGAC 1136 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1074 AAGCAGTCTGGTTCAAGAACGTGTTGTCTGTGATTGTCCCGGACTAAAGATGAGCAAGAC 1133 Query 1137 GAAGAAGCTGAAGAAGAAGACGAATAAAGTGATGAATATGATCGTTCCTTTTCTCAGGAT 1196 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||| Sbjct 1134 GAAGAAGCTGAAGAAGAAGACGAATAAACTGATGAATATGATCGTCCCTTTTCTCAAGAT 1193 Query 1197 CTTCAAAAGTTGTATGTCCAAGTGATGGAAGTAGAAACTCT--GGTAAAAGATAAAAGGT 1254 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1194 CTTCAAAAGTTGTATGTCCAAGTGATGGAAGTAGAAACTCTCTGGTAAAAGATAAAAGGT 1253 Query 1255 ATAGCAATACGAACTTGTCAGAGTAAAACGAAA 1287 ||||||||||||||| | ||||||||||||||| Sbjct 1254 ATAGCAATACGAACTCGACAGAGTAAAACGAAA 1286 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66013716675 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5