BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496939
Length=1422
Score E
Sequences producing significant alignments: (Bits) Value
AT5G66640.2 | Symbols: DAR3 | DA1-related protein 3 | chr5:2659... 1853 0.0
AT5G17890.1 | Symbols: CHS3, DAR4 | DA1-related protein 4 | chr... 553 2e-156
AT5G66610.2 | Symbols: DAR7 | DA1-related protein 7 | chr5:2658... 422 6e-117
AT5G66630.1 | Symbols: DAR5 | DA1-related protein 5 | chr5:2659... 403 2e-111
> AT5G66640.2 | Symbols: DAR3 | DA1-related protein 3 | chr5:26599384-26601867
FORWARD LENGTH=1765
Length=1765
Score = 1853 bits (1003), Expect = 0.0
Identities = 1308/1448 (90%), Gaps = 49/1448 (3%)
Strand=Plus/Plus
Query 1 CCTGCTTCAAACATGATCCATCTAAGGATCCTTTAAATACCGCCTTGGAAATTTCACGGT 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 246 CCTGCTTCAAACATGATCCATCTAAGGATCCTTTAAATACCGCCTTGGTAATTTCACGGT 305
Query 61 ATGAAGAAGAAGATCGCATGGTACGCCGGAAAATACAAGAAGAGGCTGAAAAGATTGAGA 120
||||||||||||||||||||||||| ||||||| ||||||||| | ||||||||||||||
Sbjct 306 ATGAAGAAGAAGATCGCATGGTACGTCGGAAAAGACAAGAAGAAGATGAAAAGATTGAGA 365
Query 121 TTGAAAGGGTAAAGGAAGAAAGTCTGAAGCAAGCTAAGCAGGAGGAGGAAAAGAGAAGAT 180
|||||||||| |||||||||||| |||||| ||||||||||| ||| |||||||||||||
Sbjct 366 TTGAAAGGGTTAAGGAAGAAAGTTTGAAGCTAGCTAAGCAGGCGGAAGAAAAGAGAAGAT 425
Query 181 CAGAAGAGTTGAACAAGGAGCAAGGCAAAAGAA-AGCAAGAGAACGATGATCAGCTTTC- 238
|||||||| | ||||||||||||||||||| | |||| | |||||||||||||| |
Sbjct 426 TAGAAGAGTCG---AAGGAGCAAGGCAAAAGAATA-CAAGTGGACGATGATCAGCTTGCA 481
Query 239 AA-AC-ACTTCTAAAGATAAGGGACAAATCATTCATTCCAAAGATGAT-GTGGAAAAAGT 295
|| || ||||||||||||||||||||||| | |||||||||||||| | |||||| |||
Sbjct 482 AAGACTACTTCTAAAGATAAGGGACAAATTAATCATTCCAAAGATG-TAGTGGAAGAAGA 540
Query 296 TGTGAATCCTCCTCCTAGAATTGATGGAAAATCTGTGATTGAAGATGGAATTTCTGTCAA 355
|||||||||||||||||| |||||||| ||||||| ||||| |||||||| ||||||||
Sbjct 541 TGTGAATCCTCCTCCTAGTATTGATGGCAAATCTGAGATTGGAGATGGAACATCTGTCAA 600
Query 356 TCCTCGATCTTTATGTTGCTTTCATTGCCACAGACCATTTGCTCTGCACGAGATTTTAAA 415
|||||||| ||||||||| |||||||||||||||||||||| | ||||||||||||| ||
Sbjct 601 TCCTCGATGTTTATGTTGTTTTCATTGCCACAGACCATTTGTTATGCACGAGATTTTGAA 660
Query 416 GAAGGGAAGGTTTCACATAGATTGCTACAA--AG-AGTACCGTAATCGCAACTGCTATGT 472
|||||||| |||||||||||||||||||| || | |||||||||||||||||||||||
Sbjct 661 GAAGGGAAAATTTCACATAGATTGCTACAAGGAGTACTACCGTAATCGCAACTGCTATGT 720
Query 473 CTGCCAACAAAAGATTCCTTTTAATACGGAAGGTATAAGAGAGTACAATGAGCATTCGTT 532
|||||||||||||||||| | ||| |||||||||||||| ||| || ||||||| ||||
Sbjct 721 TTGCCAACAAAAGATTCCTGTAAATGCGGAAGGTATAAGAAAGTTCAGTGAGCATCCGTT 780
Query 533 CTGGAAGGAGAAATACTGTCCTCGTCATGACGATGATGGAACTGCCAAGTGTTGCAGCTG 592
|||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||
Sbjct 781 CTGGAAGGAGAAATACTGTCCTATTCATGATGAGGATGGAACTGCCAAGTGTTGCAGCTG 840
Query 593 TGAAAGATTAGAGCCTAGGGGAACGAACTATGTAATGCTTGGTGACTTTC-GGTGGCTAT 651
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 841 TGAAAGATTAGAGCCTAGGGGAACGAACTATGTAATGCTTGGTGA-TTTCCGGTGGCTAT 899
Query 652 GTCTAGAATGTATGGGATCAGCGGTTATGGATACTAACGAAGTCCAGCCTTTGCACTTTG 711
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 GTATAGAGTGTATGGGATCAGCGGTTATGGATACTAACGAAGTCCAGCCTTTGCACTTTG 959
Query 712 AAATCCGTGAATTCTTCGAAGGCTTGTTCTTCAAGGTTGACAAAGAATTTTCTCTTCTTC 771
||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||
Sbjct 960 AAATCCGTGAATTCTTCGAAGGCTTGTTCTTGAAGGTTGACAAAGAATTTGCTCTGCTTC 1019
Query 772 TTGTTGAGAAACAAGCGCTGAATAAAGCTGAGGAAGAGGAGAAGATTGACTACCATCGTG 831
|||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||||
Sbjct 1020 TTGTCGAGAAACAAGCGCTTAATAAAGCTGAGGAAGAAGAGAAGATCGACTACCATCGTG 1079
Query 832 CAGCCGTAACCAGAGGTCTTTGCATGTCTGAAGAGCAAATTGTCCCAAGTATAATAAAGG 891
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1080 CAGCCGTAACCAGAGGTCTTTGCATGTCTGAAGAGCAAATTGTCCCAAGTATAATAAAAG 1139
Query 892 GGCCAAGGATGGGGCCGGACAATCAGCTAATAACAGACATAGTTACAGAGTCTCAAAAAG 951
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1140 GGCCACGGATGGGACCGGACAATCAGCTAATAACAGACATAGTTACAGAGTCTCAAAGAG 1199
Query 952 TGAGTGGCTGCGAGGTTACTGGGATTCTCATCATATATGGACTTCCTAGGTTATTAACAG 1011
||||||| | ||||||||| ||||||||||||||||||||||||||||| || | ||
Sbjct 1200 TGAGTGGATTCGAGGTTACAGGGATTCTCATCATATATGGACTTCCTAGAC-ATGGAGAG 1258
Query 1012 -GATATATCTTGGCTCACGAGATGATGCATGCTTGGCTTCGACTCA-ATGGTTATAGGAA 1069
| || |||| | | | || || || || || ||| | ||||||| |||
Sbjct 1259 AG-TACCTCTTT--T-ATTTTTTT-TG--TGATT---TT-GA-TCACA-GGTTATAAGAA 1305
Query 1070 TCTTAAGTTAGAGTTTGAAGAAGGATTGTGCCAAGCGTTAGGCCTCAGGTGGTTGGAGTC 1129
||||||||||||| ||||||||||||| || ||||||||||| ||||| |||||||||||
Sbjct 1306 TCTTAAGTTAGAGCTTGAAGAAGGATTATGTCAAGCGTTAGGTCTCAGATGGTTGGAGTC 1365
Query 1130 TCAGACATTTGCATCTACTGATGCTGCTGCTTCTG-T-C-G---CTTCTTC-T-T-CTT- 1179
||||||||||||||||||||||||||||||| ||| | | | ||||||| | | |||
Sbjct 1366 TCAGACATTTGCATCTACTGATGCTGCTGCTGCTGCTGCTGTAGCTTCTTCCTCTTCTTT 1425
Query 1180 --CTTC--CC-CTGCTCCTCCAGCGGCTACCACGTCAAAGAAAAGCAGTGACGACTGGTC 1234
|||| || ||||||||||||| |||| ||||||||||||||| ||||||||||||
Sbjct 1426 TTCTTCTTCCACTGCTCCTCCAGCCGCTATCACGTCAAAGAAAAG---TGACGACTGGTC 1482
Query 1235 TATTTTCGAGAAGAAGCTCGTAGAGTTTTGCATGAATCAGATCAAAGAAGATGATTCACC 1294
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1483 TATTTTCGAGAAGAAGCTCGTAGAGTTTTGCATGAATCAGATCAAAGAGGATGATTCACC 1542
Query 1295 GGTCTACGGTCTCGGATTCAAACAAGTTTACGAGATGATGGTCTCAAATAACTACAGCAT 1354
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1543 GGTCTACGGTCTCGGATTCAAACAAGTTTACGAGATGATGGTCTCAAATAACTACAACAT 1602
Query 1355 TAAGGATACCCTTAAAGAGATCGTTAGCGCTTCCAATACTACACCAGATTCAACGTTTTG 1414
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1603 TAAGGATACCCTTAAAGATATCGTTAGCGCTTCCAACGCTACACCAGATTCAACGGTTTG 1662
Query 1415 AATCAGCC 1422
||||||||
Sbjct 1663 AATCAGCC 1670
> AT5G17890.1 | Symbols: CHS3, DAR4 | DA1-related protein 4 | chr5:5916970-5923355
FORWARD LENGTH=5082
Length=5082
Score = 553 bits (299), Expect = 2e-156
Identities = 852/1106 (77%), Gaps = 90/1106 (8%)
Strand=Plus/Plus
Query 355 ATCCTCGATCTTTATGTTGCTTTCATTG-CCACAGACCAT-TTGCTCTGCACGAGATTTT 412
|||||| || ||| |||||| ||| ||| | || || | ||||| || |||||||||
Sbjct 3827 ATCCTCAATGTTTCTGTTGCCTTCGTTGTCGGGAG-CC-TATTGCTATGAACGAGATTTC 3884
Query 413 A-A-AGAAG-GGAAGGTTTCACATAGATTGCTACAAAGAG-TACCGTAAT-CGCAACTGC 467
| | ||| |||| || ||||| | ||||||||| ||| | |||| || || || |||
Sbjct 3885 AGACTTAAGAGGAATGTATCACAAACCTTGCTACAAGGAGCT-CCGTCATCCG-AATTGC 3942
Query 468 TATGTCTGCCAACAAAAGATTCCTTTTAATACGGAAGGTATAAGAGAGTACAATGAGCAT 527
||||||||| || ||||||||||| || | |||||||| | | | ||||| ||||||||
Sbjct 3943 TATGTCTGCGAAAAAAAGATTCCTCGTACTGCGGAAGGT-TTA-A-AGTACCATGAGCAT 3999
Query 528 TCGTTCTGGAAGGAGAA-ATACTGTCC-TCGTCATGACGATGATGGAACTGCCAAGTGTT 585
||||||||| ||| || |||||| || || |||||| | |||||||||| |||| ||||
Sbjct 4000 CCGTTCTGGATGGA-AACATACTGCCCTTC-TCATGATGGTGATGGAACTCCCAAATGTT 4057
Query 586 GCAGCTGTGAAAGATTAGAGCCTAGGGGAACGA-ACTATGTAATGCTTGGTGACTTTCGG 644
| ||||||||||||||||||| | | ||||| | | ||||||||||||| || |||||
Sbjct 4058 GTAGCTGTGAAAGATTAGAGCATTGCGGAAC-ACAGTATGTAATGCTTGCAGATTTTCGA 4116
Query 645 TGGCTATGTCTAGAATGTATGGGATCAGCG-G-TTATGGATACTAACGAAGT-CCAGCCT 701
|||||||||| ||||||||| ||| ||||| | |||||||| || | ||| | ||| |||
Sbjct 4117 TGGCTATGTCGAGAATGTAT-GGA-CAGCGCGATTATGGATTCTGATGAA-TGCCAACCT 4173
Query 702 TTGCACTTTGAAATCCGTGAATTCTTCGAAGGCTTGTTCTTCAAGGTTGACAAAGAATTT 761
|||||||||||||||||||||||||| || ||||| | | ||| |||| ||||||||
Sbjct 4174 TTGCACTTTGAAATCCGTGAATTCTTTGAGGGCTTACACATGAAGATTGAGGAAGAATTT 4233
Query 762 TCTCTTCT-TCTTGTTG-AGAAACAA-GCGCTGAATAAAGCTGAGGAAG-AGGAGAAGAT 817
|| || | | ||| || ||||| || || ||||||||||||||| ||| | ||||||||
Sbjct 4234 CCTGTT-TAT-TTGGTGGAGAAA-AATGCTCTGAATAAAGCTGAG-AAGGAAGAGAAGAT 4289
Query 818 TGACTACCA------TC-GTG-CAGCCG-TAACCAGAGGTCTTTGCATGTCTGAAGAGCA 868
|||| | || || ||| | | | || ||||||| ||||| | |||||||||||
Sbjct 4290 TGACAAACAGGGGGATCAGTGTCTGATGGTAGTCAGAGGTATTTGCCTATCTGAAGAGCA 4349
Query 869 AATTGTCCCAAGTATAAT-A-AAGGGGCCAAGGATGGG-GCCGGACAATCAGCTAATAAC 925
|||||| ||||| | | | |||| | ||||| || | | | || ||| || ||
Sbjct 4350 GATTGTCACAAGTGTC-TCACAAGGAGT-AAGGA-GGATGTTGAATAAGCAGATACTAG- 4405
Query 926 AGACATAGTTACAGAGTCTCAAAAAGTGAGTG-GC---TGCGAGGTTACTGGGATTCTCA 981
| || |||||||||||||||| || || || |||||||| |||| |||||||
Sbjct 4406 ATACG--GTTACAGAGTCTCAAAGGGTT-GTTCGCAAGTGCGAGGTCACTGCAATTCTCA 4462
Query 982 TCATATATGGACTTCCTAGGTTATTAACAGGATATATCTTGGCTCACGAGATGATGCATG 1041
|| ||||||| |||||||||||| | ||||||||||||||||| || |||||||||||||
Sbjct 4463 TCTTATATGGGCTTCCTAGGTTACTCACAGGATATATCTTGGCCCATGAGATGATGCATG 4522
Query 1042 CTTGGCTTCGACTCAATGGTTATAGGAATCTTAAGTTAGAGTT-T-GAAGAAGGATTGTG 1099
||| ||| ||||||||||||| ||||||||||| | | ||| | ||||||||||| ||
Sbjct 4523 CTTATCTTAGACTCAATGGTTACAGGAATCTTAACAT-G-GTTCTTGAAGAAGGATTATG 4580
Query 1100 CCAAGCGTTAGGCCT-CAGGTGGTTGGAGTCTCAGACATTTGCATCTACTGATGCTGCTG 1158
||||| ||||||| | || ||||||||||| |||||||| | | | |||| ||||
Sbjct 4581 CCAAGTGTTAGGC-TACATGTGGTTGGAGTGTCAGACATACGTTT-T--TGATACTGC-- 4634
Query 1159 CTTCTGTCGCTTCTTCTTCTTCTTC--CCCTGC--TCCTCCAGCGGCTACCACGTCAAAG 1214
| | | ||||||||||||||||| ||| || ||||| | | | ||||| ||||||
Sbjct 4635 CA-CAATAGCTTCTTCTTCTTCTTCTTCCC-GCACTCCTCTATCTACAACCACATCAAAG 4692
Query 1215 AAAAGCAGTGACGACTGGTCT-ATTTTCGAGAAGAAGCTCGTAGAGTTT-TGCATGAATC 1272
||| | |||| | ||| ||||| ||||||| ||| ||| | ||| |||| | |||
Sbjct 4693 AAA-GT--TGACC-CA--TCTGATTTT-GAGAAGAGGCTGGTAAA-TTTCTGCAAGCATC 4744
Query 1273 AGATC-AAAGAAGATGATTCACCGGTCTACGGTCTCGGATTCAA-ACAAGTTTACGAGAT 1330
|||| ||| | ||||| ||||| ||| |||| ||| |||| | ||||| || | ||
Sbjct 4745 AGATAGAAACA-GATGAGTCACCATTCTTCGGTGACGGGTTCAGGA-AAGTTAACAAAAT 4802
Query 1331 GATGGTCTCAAATAA-CTACAGCATTAAGGATACCCTTAAAGAGATCGTTAGCGCTTCCA 1389
||||| ||||||||| | ||||| ||||||||||||| ||||||||| | ||| |||||
Sbjct 4803 GATGGCCTCAAATAATC-ACAGCCTTAAGGATACCCTGAAAGAGATCATCAGCATTTCCA 4861
Query 1390 ATACTACACCAGATTCAACGTTTTGA 1415
| ||| ||| | |||||| ||| |||
Sbjct 4862 AGACTCCACAATATTCAAAGTTATGA 4887
> AT5G66610.2 | Symbols: DAR7 | DA1-related protein 7 | chr5:26584774-26587782
FORWARD LENGTH=1900
Length=1900
Score = 422 bits (228), Expect = 6e-117
Identities = 458/566 (81%), Gaps = 28/566 (5%)
Strand=Plus/Plus
Query 510 AGAGAGTACAATGAGCATTCGTTCTGGAAGGAGAAA-TACTGTCCTCGTCATGACGATGA 568
||| |||| || || ||| | ||||||||||| ||| ||||| ||| |||||| | |||
Sbjct 914 AGAAAGTATAAAGAACATCCCTTCTGGAAGGA-AAAGTACTGCCCTTTTCATGAAGTTGA 972
Query 569 TGGAACTGCCAAGTGTTGCAGCTGTGAAAGATTAGAG-CCTAGGGGAACGAACTATGTAA 627
||||||| ||||||||||||| ||||||||||||||| ||| |||||||||| |||||||
Sbjct 973 TGGAACTCCCAAGTGTTGCAGTTGTGAAAGATTAGAGCCCT-GGGGAACGAAGTATGTAA 1031
Query 628 TGCTTGGTGACTTTCGGTGGCTATGTC-TAGAATGTATGGGAT-CAGCGGTTATGGATAC 685
|||||| |||| |||||||||||| | || ||||||||| || | ||||||||||||||
Sbjct 1032 TGCTTGCTGACAATCGGTGGCTATG-CGTAAAATGTATGGAATGC-GCGGTTATGGATAC 1089
Query 686 TAACGAAGT-CCAGCCTTTGCACTTTGAAATCCGTGAATTCTTCG-AAGGCTTGTTCTTC 743
| | | ||| ||| || |||||||||||||||||||||||||||| ||| ||| | |
Sbjct 1090 TTATG-AGTGCCAACCATTGCACTTTGAAATCCGTGAATTCTTCGGAAG-CTTAAACATG 1147
Query 744 AAGGTTGACAAAGAATTTTCTCTTCTTCTTGTTG-AGAAACAAGCGCTGAATAAAGCTGA 802
|||||||| |||||||| |||||||| ||| || ||||| |||||||||| ||||||||
Sbjct 1148 AAGGTTGAGAAAGAATTCCCTCTTCTT-TTGGTGGAGAAAGAAGCGCTGAAAAAAGCTGA 1206
Query 803 GGAAG-AGGAGAAGATTGACTACCATCGTGCAGCCGTAACCAGAGGTCTTTGCATGTCTG 861
|| | | || ||||| ||| | || | || | |||||||||||| ||||| ||||||
Sbjct 1207 GGC-GCAAGAAAAGATCGACAATCAGCATGGGGTTGTAACCAGAGGTATTTGCCTGTCTG 1265
Query 862 AAGAGCAAATTGTCCCA-AGTATAAT-AAAGGGGCCAAGGATGGGGCCGGACAATC-AGC 918
||| ||| |||||| | ||| | | ||| | |||| |||||||| || | |||
Sbjct 1266 AAGGGCAGATTGTCA-ATAGTGTCTTTAAAAAG-CCAACCATGGGGCCAAACGG-CGAGC 1322
Query 919 TAATAACAGACATAGTTACAGAGTCTCAAAAAGT-GA-G-TGGCTGCGAGGTTACTGGGA 975
|| ||| | | | | |||||| ||||||| || | | ||| || ||||| |||| |
Sbjct 1323 TAGTAA--G-CTTGGGTACAGAACCTCAAAAGGTTGTTGGTGGATGTGAGGTCACTGCAA 1379
Query 976 TTCTCATCATATATGGACTTCCTAGGTTATTAACAGGATATATCTTGGCTCACGAGATGA 1035
|||||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||||
Sbjct 1380 TTCTCATCCTATATGGACTTCCTAGGTTACTAACTGGATATATCTTGGCTCATGAGATGA 1439
Query 1036 TGCATGCTTGGCTTCGACTCAATGGT 1061
|||||||||||||| |||||||||||
Sbjct 1440 TGCATGCTTGGCTTAGACTCAATGGT 1465
> AT5G66630.1 | Symbols: DAR5 | DA1-related protein 5 | chr5:26592648-26595922
FORWARD LENGTH=2412
Length=2412
Score = 403 bits (218), Expect = 2e-111
Identities = 649/847 (77%), Gaps = 69/847 (8%)
Strand=Plus/Plus
Query 515 GTACAATGA-GCATTCGTTCTGGAAGGAGAA-ATACTGTCCTCG-TCATGACGATGATGG 571
||||||| | ||| |||| ||| |||| || |||||| ||| | |||||| | ||||||
Sbjct 1320 GTACAAT-ATTCATCCGTTTTGGGAGGA-AAGATACTGCCCT-GTTCATGAAGCTGATGG 1376
Query 572 AACTGCCAAGTGTTGCAGCTGTGAAAGATTAGAGCCTAGGGGAACGAACTATGTAATGCT 631
|||| |||| || ||||| || ||||| ||||||||||||||||| || |||| || |||
Sbjct 1377 AACTCCCAAATGCTGCAGTTGCGAAAGGTTAGAGCCTAGGGGAACAAAGTATGGAAAGCT 1436
Query 632 TGGTGACT-TTCGGTGGCTATGTCTAGAATGTATGGGATCAGCGGTTATGGATACTAACG 690
| |||| | ||| |||||||| |||||||| ||||| | | | ||||||| || | |
Sbjct 1437 TAGTGA-TGGTCGATGGCTATGCCTAGAATG--TGGGA-AATCCGCTATGGATTCTGATG 1492
Query 691 AAGT-CCAGCCTTTGCACTTTGAAATCCGTGAATTCTTCGAAGGCTTGTTCTTCAAGGTT 749
|| | |||||||||| ||||||| || ||||| ||||||||| |||| | | ||| ||
Sbjct 1493 AA-TGCCAGCCTTTGTACTTTGACATGCGTGATTTCTTCGAAAGCTTAAACATGAAGATT 1551
Query 750 GACAAAGAATTTTCTCTT-CTTCTTGTTG-AGAAACAAGC-GCTGAATAAAGCTGAGGAA 806
|| ||||||||| || || || ||| || |||| || | ||| |||||| |||||
Sbjct 1552 GAGAAAGAATTTCCT-TTAATT-TTGGTGCGGAAAGAA-CTGCTCAATAAA---AAGGAA 1605
Query 807 GAGGAGAAGATTGACTACCATCGTGCAGCCG-TAACCAGAGGTCT-TTGCATGTCTGAAG 864
|| || || |||||| | ||| || || | ||| ||||| | | |||||||||||||
Sbjct 1606 GA-GA-AA-ATTGACAATCATTATG-AGGTGTTAATCAGAGCT-TATTGCATGTCTGAAC 1660
Query 865 AGCAA-AT--TGTCCCAAGTATAATAAAGGGGCCAAGGATGGGGCCGGACAATCAGCTAA 921
|| || || || | | || | | ||| |||||||| ||| | | |||| |||||
Sbjct 1661 AG-AAGATCATGACATATGTCT--CAGAGGAGCCAAGGACGGGTCAGAACAAGCAGCT-- 1715
Query 922 TAACAGACATAGTTACAGAGTCTCAAAAAG-TG---AGTG-GCTGCGAGGTTACTGGGAT 976
| | |||||| | ||| || ||||| | || | || | ||| |||| |||| ||
Sbjct 1716 T-ATAGACATGGATACGGAACCTCAAGGGGTTGTTCA-TGAG-TGCAAGGTCACTGCAAT 1772
Query 977 TCTCATCATATATGGACTTCCTAGGTTATTAACAGGATATATCTTGGCTCACGAGATGAT 1036
||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1773 TCTCATCCTATATGGACTTCCTAGATTGCTAACAGGATATATCTTGGCTCACGAGATGAT 1832
Query 1037 GCATGCTTGGCTTCGACTCAATGGTTATAGGAATCTTAAGTTAGAGTTTG-AAGAAGGAT 1095
||||||||||||| |||||||||| ||| ||| || || | | |||| ||||||||
Sbjct 1833 GCATGCTTGGCTTAGACTCAATGGACATATGAACCTGAACA-ACATTTTGGAAGAAGGAA 1891
Query 1096 TGTGCCAAGCGTTAGGCCTCAGGTGGTTGGAGTCTCAGACATTTGC-ATCTACTGATGCT 1154
| ||||||| | |||| | | |||||||||||||||||||| || | || ||||| ||
Sbjct 1892 TATGCCAAGTGCTAGGTCACCTGTGGTTGGAGTCTCAGACATACGCCA-CTGCTGATACT 1950
Query 1155 GCTGCT--T-CTG--TC-GCTTCTTCTTCTTCTTCCC-CTGCTCCTCCAGCGGCTACCAC 1207
|||| | | | || ||||||||||||||||||| | |||||||||| |||| |
Sbjct 1951 ACTGCAGATGCAGCATCAGCTTCTTCTTCTTCTTCCCGCA-CTCCTCCAGCTGCTAGTGC 2009
Query 1208 GTCAAAGAAAAGCAGTGACGACTGGTCT-ATTTTCGAGAAGAAGCTCGTAGAGTTTTGCA 1266
||||||||| | |||| | |||||| |||| ||| ||||| || || ||||||||||
Sbjct 2010 CTCAAAGAAA-G--GTGA-G--TGGTCTGATTT-CGACAAGAAACTGGTGGAGTTTTGCA 2062
Query 1267 TGAATCAGATC-AAAGAAGATGATTCACCGGTCTACGGTCTCGGATTCAA-ACAAGTTTA 1324
||||||||| ||| | || || ||||||||||||||||| ||||||| ||| ||| |
Sbjct 2063 AGAATCAGATAGAAACA-GACGAATCACCGGTCTACGGTCTTGGATTCAGGACA-GTTAA 2120
Query 1325 CGAGATG 1331
|||||||
Sbjct 2121 CGAGATG 2127
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70079960820
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5