BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496975
Length=3362
Score E
Sequences producing significant alignments: (Bits) Value
AT5G66310.1 | Symbols: | ATP binding microtubule motor family ... 2939 0.0
AT3G51150.2 | Symbols: | ATP binding microtubule motor family ... 1343 0.0
> AT5G66310.1 | Symbols: | ATP binding microtubule motor family
protein | chr5:26485685-26491382 REVERSE LENGTH=3740
Length=3740
Score = 2939 bits (1591), Expect = 0.0
Identities = 1826/1937 (94%), Gaps = 26/1937 (1%)
Strand=Plus/Plus
Query 116 AGATCGAACATTCTACAGAAGCGGCTGTGATA-ATAATCTTCTTAACTCCTCCTCC-CAT 173
||||||||| ||||||||||| |||||||||| || |||||||||| |||||| || | |
Sbjct 360 AGATCGAACTTTCTACAGAAGAGGCTGTGATATATCATCTTCTTAAGTCCTCC-CCTC-T 417
Query 174 TCTTCTTCTCTGTTCTTAGGTGGGGTAGAAGATGACTACAGAAGATGATGATCAGATGTT 233
||||||||| | |||| |||| |||||||||||||||||||||||||||||||||||| |
Sbjct 418 TCTTCTTCT-TCTTCTAAGGTAGGGTAGAAGATGACTACAGAAGATGATGATCAGATGCT 476
Query 234 AGGACCAAGCGGCACTGAGGAAAAGATTTATGTTTCTGTTCGTATGCGCCCTTTAAACGA 293
||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||
Sbjct 477 AGGACCAAGCGGCACCCAGGAAAAGATCTATGTTTCTGTTCGTATGCGACCTTTAAACGA 536
Query 294 CAAGGAAAAGTTTAGGAATGATGTCCCGGACTGGGAGTGCATCAACAATACTACCATCAT 353
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 537 CAAGGAAAAGTTTAGGAATGATGTCCCTGACTGGGAGTGCATCAACAATACTACCATCAT 596
Query 354 TTACAGGAGCCATCTTTCTATCTCTGAGCGTTCCATGTATCCTTCTGCTTACACATTTGA 413
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 597 TTACAGGAGTCATCTTTCTATCTCCGAGCGTTCCATGTATCCTTCTGCTTACACATTTGA 656
Query 414 CAGAGTGTTTAGCCCTGATTGTTGTACGAGGCAGGTCTATGAACAAGGGGCAAAGGAAGT 473
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct 657 CAGAGTGTTTAGCCCTGAGTGTTGTACAAGGCAGGTGTATGAACAAGGGGCAAAGGAAGT 716
Query 474 CGCTTTCTCCGTTGTCAGTGGCGTTAATGCTAGTGTATTTGCATATGGGCAAACAAGCAG 533
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 717 CGCTTTCTCTGTTGTCAGTGGCGTTAATGCTAGTGTATTCGCATATGGGCAAACAAGCAG 776
Query 534 TGGAAAGACTTATACAATGAGCGGAATTACTGACTGCGCCTTGGTTGATATATATGGCTA 593
||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 TGGAAAGACGTACACTATGAGCGGAATTACTGACTGCGCCTTGGTTGATATATATGGCTA 836
Query 594 CATTGACAAGCACAAGGAAAGAGAATTCATTCTTAAGTTCTCTGCCATGGAGATCTACAA 653
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 837 CATTGACAAGCACAAGGAAAGAGAATTCATTCTTAAGTTCTCTGCTATGGAGATCTACAA 896
Query 654 TGAGTCTGTAAGAGATCTCTTAAGTACAGATACTAGTCCACTCAAACTTTTAGATGACCC 713
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 897 TGAGTCTGTAAGAGATCTCTTAAGTACAGATACTAGTCCACTCAGACTTTTAGATGACCC 956
Query 714 TGAGAAAGGGACAGTTGTTGAGAAACTCACAGAGGAAACTCTGCGAGACTGGAATCATTT 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 957 TGAGAAAGGGACAGTTGTTGAGAAACTCACAGAGGAAACTCTGCGAGACTGGAATCATTT 1016
Query 774 CAAGGAGCTTCTATCTGTCTGCGAAGCTCAACGGCAGATTGGAGAGACAGCTCTAAATGA 833
||||||||| |||||||||||| |||| ||| |||| ||||| |||||||||||||||||
Sbjct 1017 CAAGGAGCTCCTATCTGTCTGCAAAGCACAAAGGCAAATTGGTGAGACAGCTCTAAATGA 1076
Query 834 AGTTAGCTCCCGGTCTCATCAGATTTTGAGATTGACAGTTGAAAGCACAGCTCGTGAATT 893
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 1077 AGTTAGCTCCCGGTCTCATCAGATTTTGAGATTGACAGTAGAAAGCATAGCTCGTGAATT 1136
Query 894 TTCCACCAATGATAAGTTTAGTACACTAACAGCAACAGTGAACTTTATTGATCTTGCTGG 953
||| |||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct 1137 TTCTACCAATGATAAGTTTAGTACTCTAACAGCGACAGTGAACTTCATTGATCTTGCTGG 1196
Query 954 AAGTGAACGTGCATCTCAATCATTATCAGCCGGTACAAGGTTGAAAGAAGGTTGTCATAT 1013
|||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1197 AAGTGAACGTGCGTCTCAATCATTATCAGCCGGCACAAGGTTAAAAGAAGGTTGTCATAT 1256
Query 1014 AAACCGAAGTTTGTTAACGCTGGGAACTGTGATACGTAAGCTAAGTAAAGGAAAAACTGG 1073
|||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||
Sbjct 1257 AAACCGAAGTTTGTTAACACTGGGAACTGTGATCCGTAAGCTAAGTAAAGAAAAAACTGG 1316
Query 1074 GCACATTCCATTCAGAGATTCAAAACTGACACGCATACTTCAGTCTTCTTTGGGAGGAAA 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 GCACATTCCATTCAGAGATTCAAAACTGACACGCATACTTCAGTCTTCTTTGGGAGGAAA 1376
Query 1134 TGCAAGAACTGCCATAATTTGCACTATGAGTCCTGCGAGAATCCATGTTGAGCAGTCAAG 1193
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1377 TGCAAGAACTGCCATAATTTGCACTATGAGTCCTGCGAGAATCCATGTTGAACAATCAAG 1436
Query 1194 AAACACACTGTTATTTGCAAGCTGCGCAAAGGAGGTGACAACAAATGCACAAGTCAATCT 1253
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1437 AAACACACTGTTATTTGCAAGCTGCGCAAAGGAGGTGACAACAAATGCACAAGTCAATGT 1496
Query 1254 TGTCATGTCTGATAAAGCTTTAGTAAAACACTTGCAGAGGGAGTTGGCTAAACTGGAAAG 1313
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1497 TGTCATGTCTGATAAAGCTTTAGTAAAGCACTTGCAGAGGGAGTTGGCTAAACTGGAAAG 1556
Query 1314 GGAGTTGAGAAGCCCTGGTCAGCCTTCGGTTGCTTCTGACACAACTGCATTACTGACGGA 1373
||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||||||
Sbjct 1557 TGAGTTGAGAAGCCCTAGTCAGGCTTCAATTGTTTCTGACACAACTGCATTACTGACGGA 1616
Query 1374 GAAAGACCTCGAGGTTGAAAAGCTAAAGAAAGAGGTACTCCAACTAGCACAACAGCTAGA 1433
||||||||| |||||||||||||| |||||||||||| |||||||||||||||| |||||
Sbjct 1617 GAAAGACCTTGAGGTTGAAAAGCTTAAGAAAGAGGTATTCCAACTAGCACAACAACTAGA 1676
Query 1434 GCAAGCTCGTTCCGAGATTATGGATCTTCgaagaatggttgaagaagagaaaaaacc-ag 1492
|||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| ||
Sbjct 1677 GCAAGCTCGTTCCGAGATTAAGGATCTTCGACGAATGGTTGAAGAAGA-AAAAAACCAAG 1735
Query 1493 aaaaagaaacgctatcaacagaaacagaagGGTTAAATGTTCTGTTGGAACATCAATACC 1552
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1736 AAAAAGAGACGCTATCAACAGAAACAGAAGGGTTAAATGTTCTGATGGAACATCAATACC 1795
Query 1553 CCAAGCTGCGAGTGCGCAGTACATGGGACTCTGAGAATACAACACCACTGAGCCCTATAT 1612
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 CCAAGCTGCGGGTGCGCAGGACATGGGACTCTGAGAATACAACACCACTGAGCCCTATAT 1855
Query 1613 CAGCTCACCGCTCCAGTATATCTCCACGATCAACTGAATATAGTTATGAAGAGAATGTCT 1672
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1856 CAGCTCACCGTTCCAGTATATCTCCACGATCAACTGAATATAGTTATGAAGAGAATGTCT 1915
Query 1673 TTCAGCTATCAGATTTCAGGATAGATTCTGCATCAAGTAGTCCGCAACAGCTTGCGTTTG 1732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1916 TTCAGCTATCAGATTTCAGGATAGATTCTGCATCAAGTAGTCCGCAACAGCTTGCGTTTG 1975
Query 1733 TAACTCCTTTCCTT--G-----A-T--AT--T---CACGGGACAGAAACTGTAGACCAAT 1777
|||||||||||||| | | | || | |||| |||||| |||||||||||||
Sbjct 1976 TAACTCCTTTCCTTAAGGTTCCACTTGATGATATTCACGTGACAGATACTGTAGACCAAT 2035
Query 1778 CTCATGTTCACATAGAGGAAATTACAGATCAACCTCATGTTCAGGAGGAGCGGTTTTATG 1837
|||||||||||| ||||||| || ||| ||||||||||||||||||| ||||||||||
Sbjct 2036 CTCATGTTCACAAAGAGGAAGCTATAGAAGAACCTCATGTTCAGGAGGAACGGTTTTATG 2095
Query 1838 AAATGGCTGAACAGACTGACGAAAATTCTGAGGATAACTGCAGGGAAGTTCGCTGCATAG 1897
||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 2096 AAATGGCTGAACACACTGACGGAAATTCTGAGGATAACTGCAGGGAAGTTCGGTGCATAG 2155
Query 1898 AAACGGAGAAGTCAGATATTGGTATAGGTCCAGAGGAAAATATGCCGGAGAGCAGTCCAG 1957
|||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 2156 AAACAGAGAAGTCAGATATTAGTATAGGTCCAGTGGAAAATATGCCGGAGAGCAGTCCAG 2215
Query 1958 ACAAATACGAAGCTGTGAA-TGAAGAAGAACCAGTATGTGTGACAGAGTCAAAGAACTTA 2016
|||||||||| ||||| || || |||||||||||||| |||||||||| |||||||||||
Sbjct 2216 ACAAATACGAGGCTGT-AACTGCAGAAGAACCAGTATCTGTGACAGAGCCAAAGAACTTA 2274
Query 2017 CGACCACCC-ACAGAAG 2032
| || | || |||||||
Sbjct 2275 CAAC-ATCCGACAGAAG 2290
Score = 2091 bits (1132), Expect = 0.0
Identities = 1289/1363 (95%), Gaps = 17/1363 (1%)
Strand=Plus/Plus
Query 1980 AGAAGAACCAGTATGTGTGACAGAGTCAAAGAACTTACGACCA-CCCACAGAAGCTGAAA 2038
||||||| ||||||||||||||||| |||||||||||| | || ||||||||||||||||
Sbjct 2286 AGAAGAAGCAGTATGTGTGACAGAGACAAAGAACTTAC-AACATCCCACAGAAGCTGAAA 2344
Query 2039 AC--------A-AAGAAGAAGAAAGAGTAAAGGAAGTCAGTGGTGCTTCTCCTCAACCAA 2089
|| | ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2345 ACGAAGAAGAAGAAGAAGAAGAAAGAGTAAAGGAAGTCAGTGGTGCTTCTCCTGAACCAA 2404
Query 2090 AACAAGAAACCAACCTCGCAAAAACTCCTCCATTCTGTGATTTCGAATGTTCACCTG-TG 2148
||||||||| ||||||| |||||| |||| |||| |||||||| ||||||||||||| |
Sbjct 2405 AACAAGAAAGCAACCTCACAAAAAATCCTGCATTGTGTGATTTGGAATGTTCACCTGAT- 2463
Query 2149 GAGTTTGATA-AAGGCATGTCTAACCTGAGAAGAATCCCAACGCCTCCAACACTTATCAC 2207
|||||||||| || |||||||||||||||| |||||| |||| |||||| | ||||||||
Sbjct 2464 GAGTTTGATACAA-GCATGTCTAACCTGAGTAGAATCTCAACACCTCCAGCCCTTATCAC 2522
Query 2208 TCCCTCTCCTGAAAAGCCTTTCTCTTGGCTTATGGAGAGAGATTCACAA-TTGTTCAGAG 2266
|||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||
Sbjct 2523 TCCCTCTCCTGAAAAGCCTTTCTCTTGGATTATGGAGAGAGATTCACAACTT-TTCAGAG 2581
Query 2267 GCATGAAGCTGACTAGAAGTCGAAGCTGCCGGCCAAGCTTATTATCGAGCTCTTCCTCCT 2326
| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 2582 GAATGAAGCTGACTAGAAGTCGAAGCTGCCGACCAAGCTTATTATCGAGCCCTTCCTCCT 2641
Query 2327 CTTGGTTAGAGAAAGATGCTGATACACCGCCAAGCTGGTACGACAAAGAATTTGTCAAAT 2386
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2642 CTTGGTTAGAGAAAGATGCTGATACACCGCCAAGCTGGTACGACAAAGAATTTATCAAAA 2701
Query 2387 CAGCTGAGACAAACCTGACAATGTGCGACATCAAGAACCAGAGGTTGTTGCAGGATGAGT 2446
||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2702 CAGCTGAGAGAAACTTGACAATGTGCGACATCAAGAACCAGAGATTGTTGCAGGATGAGT 2761
Query 2447 TTAGCGGGAGGAGCATGCCAACAACTTGGTTCGAGAGAAACTTGAGTGACACTCAAACGG 2506
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2762 TTAGTGGGAGGAGCATGCCAACAACTTGGTTCGAGAGAAGCTTGAGTGACACTCAAACGG 2821
Query 2507 CGGATGCTGCTTCACATGGTGTCAGTAATGAAATGTCGCCAAATGAGTCACCGTCTCGGC 2566
|||||||||||||||||||||||| || ||||||||||||||||| ||||| | |||||
Sbjct 2822 TGGATGCTGCTTCACATGGTGTCAGCAACGAAATGTCGCCAAATGAATCACCATTTCGGC 2881
Query 2567 CATCTGATGCTTCTGTGTTTGAGCTCCAGACAAGTGGTAGAGCTTCAATAAGCCAGGACA 2626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2882 CATCTGATGCTTCTGTGTTTGAGCTCCAGACAAGTGGTAGAGCTTCAATAAGCCAGGACA 2941
Query 2627 GAACAGAGGAGACTGGTGCTCAAAAAGACAAGCAAATCATTCATCGCTCGATGGAGGAAA 2686
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2942 GAACAGAGGAGACTGCTGCTCAAAAAGACAAGCAAATCATTCATCGATCGATGGAGGAAA 3001
Query 2687 TGGAACAGAAGTTCTTGTCCTTGAGTTCAACGAAGAGTTTCAAGGACGCAGCAATGGACC 2746
|||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||
Sbjct 3002 GGGAACAGAAGTTCTTGGCCTCGAATTCAACGAAGAGTTTCAAGGACGCAGCAATGGACC 3061
Query 2747 CAATACAAGACTACTTAGACACGCCCTTGAATTGGCCGGTGGAGTTCAAGAGGCTACAGA 2806
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 3062 CAATACAAGACTACTTAGACACGGCCTTGAATTGGCCAGTGGAGTTCAAGAGGCTACAGA 3121
Query 2807 GGGAGATAATAGAGCTGTGGCACGTGTGTAAAGTCTCTATGGCACACAGAAGCTACTTCT 2866
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3122 GGGAGATAATAGAGCTATGGCACGTGTGTAAAGTCTCAATGGCACACAGAAGCTACTTCT 3181
Query 2867 TCCTTCTGTTTAGTGGAGATCAGAAAGATTGCCTGTACTTGGAGGTAGAGCTCCGTAGAC 2926
|||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3182 TCCTTCTGTTCAGAGGAGATCAGAAAGATTGCTTGTACTTGGAGGTAGAGCTCCGTAGAC 3241
Query 2927 TTAAGTACATCAGAGAATCTTTTGCCGAAAATAGCAACGATGGCCACAATATGACCCTAA 2986
|||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||
Sbjct 3242 TTAAGTACATCAGAGAATCTTTCGCCCAAAATAGCAACGATGGCAACAATATGACCCTAA 3301
Query 2987 TCTCCTGCACGAGGGCGTTGACGAGGGAGAGGTATAAGCTGAGCAAGCTGATGCAGAGGA 3046
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3302 TCTCCTGCACGAGGGCATTGACGAGGGAGAGGTATAAGCTGAGCAAGCTGATGCAGAGGA 3361
Query 3047 AACTGTCGAAAGAAGAGAGAGAGAACTTGTTCTTGAGATGGGGCATTGGGCTCAACACGA 3106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3362 AACTGTCGAAAGAAGAGAGAGAGAACTTGTTCTTGAGATGGGGCATTGGGCTCAACACGA 3421
Query 3107 GTCACAGACGGGTCCAGCTGGCACACCGGCTCTGGTCGGATTACAAAGACATGGGTCATG 3166
||||||||||||||||||||| | || |||||||||||||||||||||||||||||||
Sbjct 3422 ATCACAGACGGGTCCAGCTGGCGCGTCGTCTCTGGTCGGATTACAAAGACATGGGTCATG 3481
Query 3167 TCCGAGAGAGCGCTTCCCTCGTTGGTAAGCTCAATGGGTTTGTGGACATGAAGTTGACTT 3226
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 3482 TCCGAGAGAGCGCCTCCCTCGTTGGTAAGCTCAATGGGTTCGTGGACATGAAGTTGACTT 3541
Query 3227 CCACAGAGATGTTTGGCGTCAACTATGCTTTCAGACCACCTCGTCCCAAGAAATCTAGTC 3286
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 3542 CCACAGAGATGTTTGGCGTCAACTATGCTTTCAGACCACCACGTCCCAAGAAATCTAGTC 3601
Query 3287 TTTGGAAACGCAGCGTTTTGTCCCTCTCCTTTTTGTAACTACT 3329
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 3602 TTTGGAAACGCAGCGTTTTGTCCCTCTCCTTTTTGTAACTACT 3644
> AT3G51150.2 | Symbols: | ATP binding microtubule motor family
protein | chr3:19000856-19006769 FORWARD LENGTH=3785
Length=3785
Score = 1343 bits (727), Expect = 0.0
Identities = 1306/1579 (83%), Gaps = 66/1579 (4%)
Strand=Plus/Plus
Query 196 GGGTAGAAGATGACTACAGAAGATGATGATCAGATGTTAGGACCAAGCGGCACTGAGGAA 255
|||| ||||||| || || || || ||||||||| |||| | || || | || ||
Sbjct 353 GGGT-GAAGATGGGTATAG--GA-GAGGATCAGATGCAAGGATCGAGTGGTAGGGAAGAG 408
Query 256 AAGATTTATGTTTCTGTTCGTATGCGCCCTTTAAACGACAAG-GAAAAGTTTAGGAATGA 314
||||||| ||||||||||||| || | || ||||| | || |||| | ||||||||
Sbjct 409 AAGATTTTTGTTTCTGTTCGTCTGAGGCCATTAAATG-TGAGAGAAAGGGCAAGGAATGA 467
Query 315 TGTCCCGGACTGGGAGTGCATCAACAAT-ACTACCATCATTTACAGGAGCCATCTTTCTA 373
||| | || |||||||| ||||| || | || |||| |||||||| ||||| ||||
Sbjct 468 TGTGGCAGATTGGGAGTGTATCAATGATGA-AACGGTCATATACAGGAGTCATCTCTCTA 526
Query 374 TCTCTGAGCGTTCCATGTATCCTTCTGCTTACACATTTGACAGAGTGTTTAGCCCTGATT 433
| || |||||||||||||| || |||| ||||||||||||||||||||| ||||||| |
Sbjct 527 TATCAGAGCGTTCCATGTACCCCACTGCATACACATTTGACAGAGTGTTTGGCCCTGAGT 586
Query 434 GTTGTACGAGGCAGGTCTATGAACAAGGGGCAAAGGAAGTCGCTTTCTCCGTTGTCAGTG 493
||| ||| ||| |||| ||||| |||||||| |||||||| ||| |||| ||||||||||
Sbjct 587 GTTCTACCAGGGAGGTGTATGATCAAGGGGCGAAGGAAGTGGCTCTCTCTGTTGTCAGTG 646
Query 494 GCGTTAATGCTAGTGTATTTGCATATGGGCAAACAAGCAGTGGAAAGACTTATACAATGA 553
| ||| |||||||||| |||||||||||||||||||||||||||||||| || || ||||
Sbjct 647 GGGTTCATGCTAGTGTCTTTGCATATGGGCAAACAAGCAGTGGAAAGACATACACTATGA 706
Query 554 GCGGAATTACTGACTGCGCCTTGGTTGATATATATGGCTACATTGACAAGCACAAGGAAA 613
|| ||||| || | ||||||| ||||||||||| |||||||| |||||||| ||||
Sbjct 707 TTGGTATTACGGATTATGCCTTGGCTGATATATATGATTACATTGAGAAGCACAATGAAA 766
Query 614 GAGAATTCATTCTTAAGTTCTCTGCCATGGAGATCTACAATGAGTCTGTAAGAGATCTCT 673
||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||
Sbjct 767 GAGAATTCATTCTGAAGTTCTCAGCCATGGAGATCTATAATGAGTCTGTAAGAGACCTCT 826
Query 674 TAAGTACAGATACTAGTCCACTCAAACTTTTAGATGACCCTGAGAAAGGGACAGTTGTTG 733
| |||||||| | ||||||||||| | || ||||||| ||||||||||| |||||||| |
Sbjct 827 TGAGTACAGACATTAGTCCACTCAGAGTTCTAGATGATCCTGAGAAAGGAACAGTTGTCG 886
Query 734 AGAAACTCACAGAGGAAACTCTGCGAGACTGGAATCATTTCAAGGAGCTTCTATCTGTCT 793
|||||||||| |||||||||||||| |||||||||||||| ||||||||| |||| |||
Sbjct 887 AGAAACTCACGGAGGAAACTCTGCGGGACTGGAATCATTTTAAGGAGCTTTTATCAATCT 946
Query 794 GCGA-AGCTCAACGGCAGATTGGAGAGACAGCTCTAAATGAAGTTAGCTCCCGGTCTCAT 852
| | |||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||||
Sbjct 947 G-TATAGCTCAACGGCAAATTGGAGAGACAGCTTTAAATGAAGTTAGTTCCCGCTCTCAT 1005
Query 853 CAGATTTTGAGATTGACAGTTGAAAGCACAGCTCGTGAAT-TTTCCACCAATGATAAGTT 911
|||||| ||||||||||||||||||||||||| ||||||| ||| | || ||||| ||
Sbjct 1006 CAGATTCTGAGATTGACAGTTGAAAGCACAGCACGTGAATATTT-GGCGAAGGATAAATT 1064
Query 912 TAGTACACTAACAGCAACAGTGAACTTT-ATTGATCTTGCTGGAAGTGAACGTGCATCTC 970
||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||
Sbjct 1065 TAGTACACTCACAGCGACAGTGAA-TTTCATTGATCTTGCTGGAAGTGAACGTGCATCTC 1123
Query 971 AATCATTATCAGCCGGTACAAGGTTGAAAGAAGGTTGTCATATAAACCGAAGTTTGTTAA 1030
||||||||||||| || |||||||||||||||||| ||||||||||||||||||| |||
Sbjct 1124 AATCATTATCAGCTGGCACAAGGTTGAAAGAAGGTGGTCATATAAACCGAAGTTTACTAA 1183
Query 1031 CGCTGGGAACTGTGATACGTAAGCTAAGTAAAGGAAAAACTGGGCACATTCCATTCAGAG 1090
| || |||||||| || || ||||||||||||||||||| ||||||||||||||||||||
Sbjct 1184 CACTAGGAACTGTCATTCGAAAGCTAAGTAAAGGAAAAAATGGGCACATTCCATTCAGAG 1243
Query 1091 ATTCAAAACTGACACGCATACTTCAGTCTTCTTTGGGAGGAAATGCAAGAACTGCCATAA 1150
||||||| |||||||||||||||||| |||| ||||||||||| || |||||| ||||||
Sbjct 1244 ATTCAAAGCTGACACGCATACTTCAGACTTCCTTGGGAGGAAACGCCAGAACTTCCATAA 1303
Query 1151 TTTGCACTA-TGAGTCCTGCGAGAATCCATGTTGAGCAGTCAAGAAACACACTGTTATTT 1209
| ||||| | |||||||||| ||| | || |||||||| |||||||||||| |||||||
Sbjct 1304 TCTGCAC-ACTGAGTCCTGCAAGAGTACACGTTGAGCAATCAAGAAACACATTGTTATTC 1362
Query 1210 GCAAGCTGCGCAAAGGAGGTGACAACAAATGCACAAGTCAATCTT-GTCATGTCTGATAA 1268
|||||||| |||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct 1363 GCAAGCTGTGCAAAGGAGGTGACAACAAATGCACAAGTCAA-CGTCGTCATGTCTGATAA 1421
Query 1269 AGCTTTAGTAAAACACTTGCAGAGGGAGTTGGCTAAACTGGAAAGGGAGTTGAGAAGCCC 1328
|||| | || | ||| || ||||| || |||||||||||||| || |||||||| |||||
Sbjct 1422 AGCTCTGGTTAGACATTTACAGAGAGAATTGGCTAAACTGGAGAGCGAGTTGAGCAGCCC 1481
Query 1329 TGGTCA-GC-CTTCGGTTGCT-TCTGACACAACTGCATTACTGACGGAGAAAGACCTCGA 1385
| |||| || ||| | ||| | |||||||||||||||||||||| ||||||||||||| |
Sbjct 1482 TCGTCAAGCTCTT-G-TTG-TGTCTGACACAACTGCATTACTGAAGGAGAAAGACCTCCA 1538
Query 1386 GGTTGAAAAGCTAAAGAAAGAGGTACTCCAACTAGCACAACAGCTAGAGCAAG-CTCGTT 1444
| ||||||||||| ||||||||| |||||||||||||| | ||||| | | || ||
Sbjct 1539 AATCGAAAAGCTAAATAAAGAGGTATTCCAACTAGCACAAGAATTAGAG-AGGGCTTATT 1597
Query 1445 C-CGAGATT-ATGGATCTTCga-agaatggttgaagaagagaaaaaaccagaaaaagaaa 1501
| || |||| | |||||||| | ||| | ||| ||||| | ||| || |||| |
Sbjct 1598 CTCG-GATTGA-GGATCTTCAACAGATTA-TTGGAGAAGC-A-----CCACAACAAGAGA 1648
Query 1502 cgctatcaacaga---a-a-caga-agGGTTAAATGTTCTGT-TGGAACATCAATACCCC 1554
|||||||||| | | |||| | |||||| | | ||| || ||| ||||||
Sbjct 1649 TATTATCAACAGACTCAGAACAGACAAACACAAATGTGGT-TCTGGGACGTCAGTACCCC 1707
Query 1555 AAGCTGCGAGTGCGCAGTACATGGGA--CTCTGAGAATACAACACCACTGAG-CCCTATA 1611
||| | || ||||| ||| ||||||| |||| | |||| ||||||| ||| ||| ||
Sbjct 1708 AAGTTACGGGTGCGTAGTTCATGGGAGTCTCT-A-AATATAACACCAGAGAGTCCCC-TA 1764
Query 1612 TCAGCTCAC-CGCTCCAGTAT-ATCTCC--ACGATCAACTGAATATAGTTATGAAGAGAA 1667
||||| || || |||| ||| || ||| || |||||| || || ||| ||| |||||
Sbjct 1765 TCAGCGCAAGCG-TCCATTATGATTTCCCCACAATCAACCGAGCATGGTTCTGACGAGAA 1823
Query 1668 TGTCTTTC-AGCTATCAGATTTCAGGATAGA-TTCTGCAT-CAAGTAGTCC-GC--AACA 1721
||| |||| |||| ||||| || ||| | || ||| | | |||||||||| || ||||
Sbjct 1824 TGT-TTTCCAGCTTTCAGACTTGAGGTT-GAATTCGGG-TGCAAGTAGTCCAGCTCAACA 1880
Query 1722 GCTTGCGTTTGTAACTCCT 1740
||||||||||||||||||
Sbjct 1881 CCTTGCGTTTGTAACTCCT 1899
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 167306754905
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5