BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg497001 Length=3144 Score E Sequences producing significant alignments: (Bits) Value AT5G66150.1 | Symbols: | Glycosyl hydrolase family 38 protein ... 4848 0.0 > AT5G66150.1 | Symbols: | Glycosyl hydrolase family 38 protein | chr5:26439013-26444434 REVERSE LENGTH=3144 Length=3144 Score = 4848 bits (2625), Expect = 0.0 Identities = 2977/3148 (95%), Gaps = 20/3148 (1%) Strand=Plus/Plus Query 7 AAACCGGGTTTGTCTTTATTGAAAGGAGCACTTTGTGTTATTGTTTCTGTTCTCCGGTTG 66 ||||||||| ||||||||||||||||| |||||||||||||||||| | |||| | |||| Sbjct 7 AAACCGGGTATGTCTTTATTGAAAGGATCACTTTGTGTTATTGTTTTTCTTCTTCTGTTG 66 Query 67 TC---GGTTGAGAGCGTCAAAGGCGGGGGCTACGTGAAGTATGGCACCGAAGCTAAAGTG 123 || |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 67 TCGTTGGTTGAGAGCGTCAAAGGCGGGGGATACGTGAAGTATGGAACCGAAGCTAAAGTG 126 Query 124 GTTCCGGGGAAACTAAATGTTCATCTTGTTCCGCATTCGCATGACGATGTCGGGTGGTTG 183 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 127 GTTCCGGGGAAACTAAATGTTCATCTTGTTCCGCATTCGCATGACGATGTCGGCTGGTTG 186 Query 184 AAAACTGTTGATCAGTACTATGTAGGATCGAACAACAGTATCCAGAACGCTTGTGTGCGG 243 |||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||| || Sbjct 187 AAAACTGTTGATCAGTACTACGTAGGATCTAACAACAGAATCCAGAACGCTTGCGTGAGG 246 Query 244 AACGTGCTAGACTCGGTGGTGGATTCTCTACTTGGCGATCCCAATAGAAAGTTTGTTTTT 303 ||||| ||||||||||||||||||||||||||| | |||||||||||||||||||| ||| Sbjct 247 AACGTCCTAGACTCGGTGGTGGATTCTCTACTTCGTGATCCCAATAGAAAGTTTGTGTTT 306 Query 304 GCGGAAATGGCTTTCTTTACGCGTTGGTGGGAAGAACAAAGCCCCGAGACACAAGAGCAA 363 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 307 GCGGAAATGGCCTTCTTTACGCGTTGGTGGGAAGAACAAAGCCCCGAGAGACAAGAGCAA 366 Query 364 GTGAAGAGACTAGTGAAATCGGGGCAACTAGAGTTTGTAAATGGAGGATGGGCTATGAAT 423 |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 367 GTGAGGAGACTAGTGAAATCCGGGCAACTAGAGTTTGTAAATGGAGGATGGGCTATGAAT 426 Query 424 GATGAAGCAACGTGCCATTACATAGATATGATAGACCAAACCACAAAGGGGCATCGGTTT 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 427 GATGAAGCAACGTGCCATTACATAGATATGATAGACCAAACCACAAAGGGGCATCGGTTT 486 Query 484 ATAAAGCAACAGTTCAATACAACTCCACGTGCTGCTTGGCAAATCGACCCCTTTGGTCAT 543 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 487 ATAAAGCAACAGTTCAACACAACTCCACGTGCTGCTTGGCAAATCGATCCCTTTGGTCAT 546 Query 544 TCCTCTGTGCAAGCTTACCTCCTTGGAGCAGAGTTAGGGTTGGATTCTGTGCATTTCGCG 603 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 547 TCCTCTGTTCAAGCTTACCTCCTTGGAGCAGAGTTAGGGTTGGATTCTGTGCATTTCGCG 606 Query 604 AGAATCGATTACCAAGACAGAGAAAAGAGAAAGGCCGAGAAATCACTAGAAGTAATCTGG 663 ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| Sbjct 607 AGAATCGATTACCAAGACAGAGAAAAGCGAAAGGCCGAGAAATCACTTGAAGTCATCTGG 666 Query 664 AGAGGATCAAAAACATTGGCTTCTTCTTCTCAGATATTCACCAATGTCTTTCTT-GTTCA 722 ||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||| ||||| Sbjct 667 AGAGGATCAAAAACACTGGATTCTTCTTCTCAGATATTCACCAATATCTT-CTTTGTTCA 725 Query 723 TTACGGCCCTCCCACTGGCTTTCACTATGAAGTCACCGACGATTACGTCCCCCTCCAGGA 782 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 726 TTACGGCCCTCCCACTGGCTTTCACTATGAAGTCACCGACGATTACGTACCCCTCCAGGA 785 Query 783 CAACCCTCGTTTCGATGCCTATAACATTAAGGAGGCCGTTGATAATTTCGTCAATGCTTC 842 ||||||||||||||||| |||||||||||||||||| ||| || |||||||||||||||| Sbjct 786 CAACCCTCGTTTCGATGGCTATAACATTAAGGAGGCGGTTAATGATTTCGTCAATGCTTC 845 Query 843 TCTGGTTTATGCCAATGTGAGTCGAGGGAACCATGTGATGTGGACAATGGGTGATGATTT 902 ||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 846 TCTTGTTTATGCTAATGTGAGTCGAGGGAACCATGTGATGTGGACAATGGGCGATGATTT 905 Query 903 TCAGTACCAGTTCGCCGAGTCTTGGTTCAGGCAGATGGACAGACTCATCCATTACGTTAA 962 |||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct 906 TCAGTACCAGTTCGCCGAGTCTTGGTTCAGACAGATGGACAGACTTATCCATTATGTTAA 965 Query 963 CAAGGATGGCCGTGTCAACGCCTTGTACTCCACACCATCTCTCTATGTTGATGCCAAGAA 1022 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 966 CAAGGATGGCCGTGTGAACGCCTTGTACTCCACACCATCTCTCTATGTTGATGCCAAGAA 1025 Query 1023 TAATGCCAATGTTACTTGGCCTCTCAAGACTGGTGATTTTTTCCCATATGCGGATCGGGC 1082 | |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 1026 TGTTGCCAATGTTACTTGGCCTCTCAAGACTCATGACTTTTTCCCATATGCGGATCGGGC 1085 Query 1083 ATACGCTTACTGGACTGGCTACTTCACCAGCCGTCCTGCTCTTAAACGTTATGTTCGGGC 1142 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1086 ATACGCTTACTGGACTGGCTACTTCACCAGCCGTCCTGCTCTTAAACGATATGTTCGGGC 1145 Query 1143 TCTTAGCGGATACTACATGGCTGCAAGGCAACTTGAATTTCGGGTAGGCAAGAAATCTGG 1202 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| Sbjct 1146 TCTTAGCGGATACTACATGGCTGCAAGGCAACTTGAATTTCTGGTGGGCAAGAACTCTGG 1205 Query 1203 AGGACCAAATACTTGCAGTCTTGGAGATGCTTTAGCGATAGCGCAGCACCACGATGCTGT 1262 ||| ||||| |||| ||||||||| |||||||||| ||||||||||||||| |||||||| Sbjct 1206 AGGTCCAAACACTTACAGTCTTGGGGATGCTTTAGGGATAGCGCAGCACCATGATGCTGT 1265 Query 1263 CACTGGAACTGCCAAGCAGCATGTAACAAATGATTACATGAAACGCCTTGCTGTTGGTGC 1322 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1266 CACTGGAACTGCCAAGCAGCATGTAACAAATGATTACATGAAACGCCTTGCTCTTGGTGC 1325 Query 1323 TTCTGAGGCAGAAGCTTTGGTGAATGCTGCGCTGGCATGCCTATTGAACAAGGCACCAAA 1382 |||||||||||||||| |||||||| ||||||||||||||||| ||||||| |||||||| Sbjct 1326 TTCTGAGGCAGAAGCTGTGGTGAATTCTGCGCTGGCATGCCTAATGAACAAAGCACCAAA 1385 Query 1383 AGGTGGCTGCACAAAGCCTGCAATAGCATTCAGCCAGCAGTGCTCGTTGATGAATATCAG 1442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1386 AGGTGGCTGCACAAAGCCTGCAATAGCATTCAGCCAGCAGTGCTCGTTGATGAATATCAG 1445 Query 1443 CTACTGCCCATCGACAGAAGAAACCATTCCAAGCCAGAAGAGCTTGATTCTGGTGGCGTA 1502 ||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 1446 CTATTGCCCATCGACAGAAGAAACCCTTCCAGGCCAGAAGAGCTTGATTCTGGTGGCGTA 1505 Query 1503 TAACTCCCTTGGATGGAATCGTACAGAAATCATCAGGATTCCGGTCAATGATGCAGGTCT 1562 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1506 TAACTCCCTTGGATGGAACCGTACAGAAATCATCAGGATTCCGGTCAATGATGCAGGTCT 1565 Query 1563 AAGCGTGGAGGATTCATCTGGAAAAACCCTTGATGCTCAATACATCCCCATGGATAATGT 1622 ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1566 AAGTGTGGAAGATTCATCTGGAAACACCCTTGATGCTCAATACATCCCCATGGATAATGT 1625 Query 1623 CACGAGCAACCTCAGAAGTTTCTATACAAAAGCTTATTTAGGAATATCTTCCCTGCAGAT 1682 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1626 CACGAGCAACCTCAGAAGTTTCTACACAAAAGCTTATTTAGGAATATCTTCCCTGCAGCG 1685 Query 1683 TCCAAAGTATTGGCTCGTGTTTAAGGCAACAG-TACCGCCACTTGGTTGGAACACATTCT 1741 |||||||||||||||||||||||| |||| || | || |||||||||||||||||||||| Sbjct 1686 TCCAAAGTATTGGCTCGTGTTTAAAGCAA-AGGTGCCACCACTTGGTTGGAACACATTCT 1744 Query 1742 TCATATCTAAAGCATCCGCACAAGGAAGCAGTAATCACACACACTCTTCAGTGATGCTTA 1801 |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct 1745 TCATATCTAAAGCATCCGCACAAGGAAGCAACAATCACAAACACTCTTCAGTGATGCTTA 1804 Query 1802 GTCCGGTGAAAAATACGACTGAAATTGGTCCAGGAAATGTAAAGATGGTGTTTTCTTCAG 1861 ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1805 GTCCGATGAACAATACGACTGAAATTGGTCCAGGAAATCTAAAGATGGTGTTTTCTTCAG 1864 Query 1862 ACTCTGGTCGTCTCGAACGGATATACAACTCCAGAACAGGAGCTGACATAATGGTGGATC 1921 |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct 1865 ACTCTGGTCGTCTCGAACGGATGTACAACTCCAGAACAGGAGCTGACATAAAGGTGGATC 1924 Query 1922 AGAACTATTTCTGGTATGCTTCAAATGGTGGGGACTCAAAAGATCCCCAGGTTTCCGGTG 1981 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| Sbjct 1925 AGAACTATTTCTGGTATGCTTCAAATGTTGGGGACGCAAAAGATCCCCAGGTTTCTGGTG 1984 Query 1982 CATATATTTTTCGACCTAATGGTTCCTTGGCGTATCCTGTTTCGTCTTCCAAAATATGGA 2041 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 1985 CATATATATTTCGACCTAATGGTTCCTTGGCGTATCCTGTTTCGTCGTCCAAAATATGTA 2044 Query 2042 CCGTAACC-GATGCTTTCATTGGCAATGGTAATGCGCAGCCAAAGTTGCAGATTGTGCGA 2100 |||| || | |||||||||||||||||| || | |||| |||||||||||||||||||| Sbjct 2045 CCGTGACTAG-TGCTTTCATTGGCAATGGAAACGTGCAGTCAAAGTTGCAGATTGTGCGA 2103 Query 2101 GGGCCTTTGATAGATGAGGTGCACCAGCAGTTTAGTCCGTGGGTGGCACAGGTGGTAAGA 2160 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2104 GGGCCTTTAATAGATGAGGTGCACCAGCAGTTTAGTCCTTGGGTGGCACAGGTGGTAAGA 2163 Query 2161 CTGTACAAAGAAAAAGAGCACGCCGAGTTTGAGTTCACTATTGGTCCAATTCCT-TCCGG 2219 || ||||||||||||||||||||||| |||||||||||||||||||||||| || | || Sbjct 2164 CTATACAAAGAAAAAGAGCACGCCGAATTTGAGTTCACTATTGGTCCAATTTCTGTT-GG 2222 Query 2220 TAATGGAGATCTAATAGGGAAAGAGATTATCACGCGAATGGTAACAAATATGACTACGGA 2279 ||| ||| |||||| ||| ||||||||||||||||||||||||||| |||||||||| | Sbjct 2223 TAAGGGACATCTAACAGGAAAAGAGATTATCACGCGAATGGTAACAGATATGACTACAGC 2282 Query 2280 TAAGGCA-TTCTATACTGACTCTAATGGAAGAGACTTTTTGAAACGGGTCCGGGACAACC 2338 ||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2283 TAAGG-AGTTCTATACTGACTCTAATGGAAGAGACTTTCTGAAACGGGTCCGGGACAACC 2341 Query 2339 GAACAGACTGGCATCTCCAAGTGAATGAGCCAATAGCAGGAAACTACTATCCGCTTAATC 2398 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2342 GAACAGACTGGCATCTCGAAGTGAATGAGCCAATAGCAGGAAACTACTATCCGCTTAATC 2401 Query 2399 TTGGAATGTAC-TCAAAAGACGAGAAAGCAGAGTTGTCGGTGTTGGTTGATCGGGCTACT 2457 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2402 TTGGAATGTACAT-AAAAGACGAGAAAGCAGAGTTGTCGGTGTTGGTTGATCGGGCTACT 2460 Query 2458 GGGGGTGCTAGTATTAAGAACGGTGAAATAGAGTTGATGCTTCACAGGAGTACGTGCATG 2517 |||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| |||| Sbjct 2461 GGGGGTGCAAGTATTAAGGACGGTGAAATAGAGTTGATGCTTCACAGGAGAACGTCCATG 2520 Query 2518 GATGACGCGAGAGGAGTAGAGGAGGGCCTTGCAGAAACTGTGTGTGTGAATGGTACCTGC 2577 |||||| |||||||||| |||||| |||||| |||||||||||||||||||| |||||| Sbjct 2521 GATGACTCGAGAGGAGTGGAGGAGAGCCTTGTAGAAACTGTGTGTGTGAATGACACCTGC 2580 Query 2578 GCAGGATTAACGGTTCGTGGGAATTACTATGTAAGCATAAATAGGGTAGGAGAAGGAGGG 2637 |||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2581 GCAGGATTGACGATTCGTGGGAATTACTATGTAAGCATAAATAAGGTAGGAGAAGGAGGG 2640 Query 2638 CGGTGGAGACGAGAGACTGGGCAGGAATTATACTCTCCTCTTCTAATGGCATTCGCACAC 2697 |||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||| Sbjct 2641 CGGTGGAGACGAGAGACTGGACAGGAAATATACTCACCTCTTCTAATGGCATTCGCACAC 2700 Query 2698 GAGAACAAGGAGAAATGGAAAGCCTCCAATACTGTGAAAGGTTATGCCATGGATCCTCTC 2757 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct 2701 GAGAACAAGGAGAAATGGAAAGCCTCAAATACTGTGAAAGGTTATGCCATGGATCATCTC 2760 Query 2758 TACACCTTGCCTCAAAACACTGCTCTCATCACTCTTGAGGGAAT-GGATTTCGGGAACGT 2816 ||||||||||||||||||| |||||||||||||||||||| | | |||| |||||||||| Sbjct 2761 TACACCTTGCCTCAAAACATTGCTCTCATCACTCTTGAGG-AGTTGGATCTCGGGAACGT 2819 Query 2817 CCTTGTTCGCCTGGCTCATCTCTACGAGGCTGGAGAAGACAGTGATTACTCGAAAACCGC 2876 |||| ||||||||||||||||||||||||| |||||||||||||||||||| |||| ||| Sbjct 2820 CCTTCTTCGCCTGGCTCATCTCTACGAGGCGGGAGAAGACAGTGATTACTCTAAAATCGC 2879 Query 2877 TAAAGTTGAGCTGAAGAAGCTGTTTTCCGGGAAAATGATCAAAGAAGTGACGGAAATGAG 2936 |||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 2880 TAAAGTTGAGTTGAAGAAGTTGTTTTCCGGCAAAATGATCAAAGAAGTGACGGAAATGAG 2939 Query 2937 TTTGTCAGGAAATCaagagaaagcgaagatgaaagagaagatgaagtggaaagtggaggg 2996 |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 2940 TTTGTCAGCAAATCAAGAGAAAGTAAAGATGAAGGAGAAGATGAAGTGGAAAGTGGAGGG 2999 Query 2997 tgaagcggaagaagCTTCTTCCCCGCAAAGAGGGGGAGCCGTTGACAAGTCGACTTTAGT 3056 |||||||||| || |||||||||||| |||||| ||| |||||||||||||||||||||| Sbjct 3000 TGAAGCGGAACAACCTTCTTCCCCGCTAAGAGGCGGACCCGTTGACAAGTCGACTTTAGT 3059 Query 3057 AGTAGAGCTTGGTCCAATGGAGATTCGTACATTTGTGGTTGAGTTTTCTCAGAAACAACG 3116 ||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||| Sbjct 3060 AGTAGAGCTTGGTCCCATGGAGATTCGTACATTTGTGGTTCAGTTTTATCAGAAACAACG 3119 Query 3117 AAGAAGAAGAAAGTTGTTTGTGGGATGA 3144 |||||||| | |||||||||||||||| Sbjct 3120 AAGAAGAA-A--GTTGTTTGTGGGATGA 3144 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 156370361331 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5