BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg497020 Length=1782 Score E Sequences producing significant alignments: (Bits) Value AT5G66020.1 | Symbols: IBS2, ATSAC1B, ATSAC6, SACIB | Phosphoin... 2804 0.0 AT3G51460.1 | Symbols: RHD4 | Phosphoinositide phosphatase fami... 1692 0.0 > AT5G66020.1 | Symbols: IBS2, ATSAC1B, ATSAC6, SACIB | Phosphoinositide phosphatase family protein | chr5:26401193-26404691 REVERSE LENGTH=1782 Length=1782 Score = 2804 bits (1518), Expect = 0.0 Identities = 1707/1795 (95%), Gaps = 26/1795 (1%) Strand=Plus/Plus Query 1 ATGGAGGGTAGGCACAAGTTACACTCTGGCTTGCGTTTATGGGAATTCCCTGATCAGTAC 60 |||| | |||||| |||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct 1 ATGGTGAGTAGGCTCAAGATACACTCTGGCTTGCGTTTGTGGGAATTCCCTGATCAGTAC 60 Query 61 GTCATCGAGCCAACCGATGGTTCCTCCGCTTCATGTTTGGACATTAGCCGTCTTGACGGC 120 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 61 GTCATCGAGCCAACCGATGGTTCCTCCGCTTCATGTTTGGATATTAGTCGTCTTGACGGC 120 Query 121 TCCATGAAGCTCATTGATCAAGTAGCAGAATGCAACTCTTTGCGTGTCCCTAAAATCCGC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TCCATGAAGCTCATTGATCAAGTAGCAGAATGCAACTCTTTGCGTGTCCCTAAAATCCGC 180 Query 181 TCCATTTTCGGTGTGGTCGGGATGCTGAAGCTCCTGGCAGGATCCTACTTAGTAGTTGTG 240 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TCCATTTTCGGTGTGGTTGGGATGCTGAAGCTCCTGGCAGGATCCTACTTAGTAGTTGTG 240 Query 241 ACAGAGAGCGAATCTGTTGGCTCGTTTTTGGGACATCCTATATTCAAAATTAATTCGCTC 300 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 241 ACAGAGAGCGAATCTGTTGGCTCGTTTTTGGGACATCCTATATACAAAATTAATTCGCTC 300 Query 301 AAGTTTCTTCCTTGTGATCATTCACTTGAAAACTCTCATGAAGAACAGAAAAAGATGGAG 360 ||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 301 AAGTTTCTTCCATGTGATCATTCACTTGAAAACCCGCATGAAGAACAGAAAAAGATGGAG 360 Query 361 AC---TGACTTCTCTAGGCTGCTAAGCGTCGCAGAGAGGACAACTGGGCTCTACTTCTCA 417 || ||||| ||||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct 361 ACTGATGACTACTCTAGGCTGCTAAGTGTCGCTGAGAGGACAACTGGTCTCTACTTCTCA 420 Query 418 TATGAAATAAACTTGACTCTCACCGCACAGCGGTTGCATGATTTGGGTGATGAGTCTAAG 477 |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 421 TATGAAATTAACTTGACTCTCACTGCACAGCGCTTGCATGATTTGGGTGATGAGTCTAAG 480 Query 478 TTGCTTCCTTTGTGGAGACAGGCTGAGCCTAGATTTCTATGGAACAACTATATGTTAGAA 537 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 481 TTGCTTCCTTTGTGGAGACAGGCTGAGCCTAGATTTCTATGGAACAATTATATGTTAGAA 540 Query 538 GTTCTTATCGAAAATAAGCTTGATCAGTTCTTGCTTCCTACAATTTTCCTTAACCCTGCA 597 ||||||||||| ||||||||||||||||||||||||||| || || | || | Sbjct 541 GTTCTTATCGATAATAAGCTTGATCAGTTCTTGCTTCCTGTAA--TT-C--AA----G-- 589 Query 598 TCACGTTTTCATAGTTTTCAAACAGCCATTGGAAGAGATATCGTTGACATTACTCTGATT 657 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 590 GGA-GTTTTCATAGTTTTCAAACAGCCATTGGAAGAGATATCGTTGACATTACTCTGATT 648 Query 658 GCTAGGAGATGCTCTAGAAGAAATGGTACGCGCATGTGGCGACGAGGAGCTGACCCTGAT 717 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 649 GCTAGGAGGTGCTCTAGAAGAAATGGTACACGCATGTGGCGACGAGGAGCTGACCCTGAT 708 Query 718 GGTTATGTTGCTAATTTTGTGGAGACTGAGCAAATTGTGCGCATGAACGGATACACATCA 777 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 709 GGTTATGTTGCTAATTTTGTGGAGACTGAGCAAATTGTACGCATGAACGGATACACATCA 768 Query 778 TCATTTGTTCAGGTTAGAGGATCCATGCCTTTTATGTGGGAGCAAATTGTAGATCTGACC 837 || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 769 TCCTTTGTTCAGATTAGAGGATCCATGCCTTTTATGTGGGAGCAAATTGTAGATCTGACC 828 Query 838 TACAAGCCCAAGTTTGAGATTGTCCAACCTGAAGAAGCTGTGAGGATAGCTGAGCGTCAC 897 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 829 TACAAGCCCAAGTTTGAGATTGTCCAACCTGAAGAAGCTGCGAGGATAGCTGAGCGTCAC 888 Query 898 TTTCTCGGCGTAAGGAAAAAATATGGATCAGTTTTGGCGGTTGATCTTGTCAATAAGCAT 957 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 889 TTTCTCGACTTAAGGAAAAAATATGGATCAGTTTTGGCGGTTGATCTTGTCAATAAGCAT 948 Query 958 GGAGGTGAGGGGCGCCTAAGTGAAAGGTTTGCAGGTGCTATGCAGCACATCACTGGTGAT 1017 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 949 GGAGGTGAAGGGCGCCTAAGTGAGAGGTTTGCAGGTGCTATGCAGCACATCACTGGTGAT 1008 Query 1018 GATGTAAGATACCTGCACTTTGATTTCCATCACATATGTGGCCATATTCACTTTGAGCGC 1077 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1009 GATGTAAGATACCTGCACTTTGATTTCCATCACATCTGTGGCCATATTCACTTTGAGCGC 1068 Query 1078 TTAGCAATTTTGTATGAGCAGATGGAGGATTTCCTCGAGAAAAACGGGTACTTTTTGTTT 1137 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1069 TTAGCAATTCTGTATGAGCAGATGGAGGATTTCCTCGAGAAAAACGGGTACTTTTTGTTG 1128 Query 1138 AATGAAAAGGGTGAGAAAATGAAGGAGCAGCTTGGTATTGTGCGAACAAACTGCATAGAT 1197 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1129 AATGAAAAGGGTGAGAAAATGAAGGAGCAGCTTGGTATTGTGCGAACCAACTGCATAGAT 1188 Query 1198 TGCTTAGACCGTACTAAT---AGC-A---T--GATAGGCCGAAA-CATGTTGGAATTTCA 1247 |||||||||||||||||| | | | | |||||||||||| | |||||||| |||| Sbjct 1189 TGCTTAGACCGTACTAATGTCACCCAGAGTATGATAGGCCGAAAGC-TGTTGGAACTTCA 1247 Query 1248 ACTCAAAAGGATTGGTGTTTTTGGTGCCGAAGAGGCTATAAGCTCGCATAAAAATTTTGA 1307 |||||||||||||||||||||||||||||||||| | ||| |||||||| |||| ||||| Sbjct 1248 ACTCAAAAGGATTGGTGTTTTTGGTGCCGAAGAGACCATACGCTCGCATCAAAACTTTGA 1307 Query 1308 TGAATGCTATAAGATATTGTGGGCTAATCACGGTGATGACATTAGCATTCAATACTCCGG 1367 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1308 CGAATGCTATAAGATATTGTGGGCTAATCACGGTGATGACATTAGCATTCAGTACTCCGG 1367 Query 1368 CACTCCTGCACTTAAAGGAGATTTTGTCAGGTATGGTCAAAGGACTGTCCAAGGAGTCCT 1427 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1368 CACTCCTGCACTTAAAGGAGATTTTGTCAGGTATGGTCAAAGGACTATCCAAGGAGTCCT 1427 Query 1428 TCAAGATGGCTGGAATGCCCTCGCACGCTACTATCTGAACAATTTTGCTGATGGAACTAA 1487 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1428 TCAAGATGGCTGGAATGCCCTCGCACGCTACTACCTGAACAATTTTGCTGATGGAACTAA 1487 Query 1488 GCAGGATGCAATTGATCTTGTGCAAGGACACTATATAGTTGCTGTGAGCCGAGACATGGC 1547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1488 GCAGGATGCAATTGATCTTGTGCAAGGACACTATATAGTTGCTGTGAGCCGAGACATGGC 1547 Query 1548 TCCTGTGCCTCGAAAGGGAGGTCTTGAGGCTGTAGCTAACTTTCCGGTGGCTTTGATGGT 1607 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| Sbjct 1548 TCCTGTGCCTCGAAAGCGAGGTCTTGAGGCTGTAGCTAACTTTCCAGTGGCTTTGACGGT 1607 Query 1608 GATTCTGATCAGTTTCTGGTTTGCAACAATGTCTGTCAAACAAGTTGGGAGTAGTTATAA 1667 |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct 1608 GATTCTGATCAGTTTCTGGTTTGCAACAATGTCTGTGAAACAAGTTGGGAGTGGTTATAA 1667 Query 1668 GCACTTATTTTTCTCATTTGTTTGGGCGGGCATCAGTGTAGCTGTCGCAGCACTCGTGAG 1727 |||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct 1668 GCACTTGCTTTTCTCACTGGTTTGGGCGGGCATCAGTGTAGCTGTCGCGGCACTCGTGAG 1727 Query 1728 GGCCAATGGCCGGATCTTCTGCAACCGGCCTTGTCTGCACAAGCCCAGATCTTGA 1782 |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct 1728 GGCCAATGGCCGTATCTTCTGCAACCGGCCTAGTCTGCACAAGCCCAGATCTTGA 1782 > AT3G51460.1 | Symbols: RHD4 | Phosphoinositide phosphatase family protein | chr3:19092518-19097353 FORWARD LENGTH=2379 Length=2379 Score = 1692 bits (916), Expect = 0.0 Identities = 1500/1776 (84%), Gaps = 63/1776 (4%) Strand=Plus/Plus Query 34 CGTTTATGGGAATTCCCTGATCAGTACGTCATCGAGCCAACCGATGGTTCCTCCGCTTCA 93 ||||||||||||||||| ||||||||| ||||||||||| | ||||| || | ||||| Sbjct 417 CGTTTATGGGAATTCCCCGATCAGTACATCATCGAGCCAGCTGATGGCTCAGGCTCTTCA 476 Query 94 TGTTTGGACATTAGCCGTCTTGACGGC-TCCATGAAGCTCATTGATCAAGTAGCAGAATG 152 |||||||| ||||| ||| |||| || |||||||||||||| |||||||| ||||| | Sbjct 477 TGTTTGGATATTAGTCGTGTTGA-TGCTTCCATGAAGCTCATCGATCAAGTCCCAGAAAG 535 Query 153 CAACTCTTTGCGTGTCCCTAAAATCCGCTCCATTTTCGGTGTGGTCGGGATGCTGAAGCT 212 ||| || ||||||||||||||||||| |||||||| |||||||| |||||| ||||||| Sbjct 536 CAATTCCGTGCGTGTCCCTAAAATCCGTTCCATTTTTGGTGTGGTTGGGATGTTGAAGCT 595 Query 213 CCTGGCAGGATCCTACTTAGTAGTTGTGACAGAGAGCGAATC-TGTTGGCTCGTTTTTGG 271 ||| |||||||| ||||| || ||||| || ||||| ||| | |||||| |||||| ||| Sbjct 596 CCTTGCAGGATCATACTTGGTGGTTGTAACTGAGAGTGAA-CGTGTTGGATCGTTTCTGG 654 Query 272 GACATCCTATATTCAAAATTA-ATTCGCTCAAGTTTCTTCCTTGTGATCATTCACTTGAA 330 | ||||||||||||||| ||| | |||| ||| ||||||||||||||||||||||| || Sbjct 655 GGCATCCTATATTCAAAGTTACA-ACGCTTAAGGTTCTTCCTTGTGATCATTCACTTAAA 713 Query 331 AACTCTCATGAAGAACAGAAAAAGATGGAGACTGACTTCTCTAGGCTGC-TAAGCGTCGC 389 ||||| | |||||||||||||||||||||||| || ||||| | ||| | |||| || || Sbjct 714 AACTCGCCTGAAGAACAGAAAAAGATGGAGACCGAGTTCTCCAAGCT-CTTAAGTGTAGC 772 Query 390 AGAGAGGACAACTGGGCTCTACTTCTCATATGAAATAAACTTGAC-TCTCACCGCACAGC 448 ||| | ||||||||| ||||| |||||||||||| | ||||| || | | | | |||| | Sbjct 773 AGAAAAGACAACTGGTCTCTATTTCTCATATGAAGTTAACTTAACAT-TGAGCTCACAAC 831 Query 449 GGTTGCATGATTTGGGTGATGAGTCTAAGTTGCTTCCTTTGTGGAGACAGGCTGAGCCTA 508 | |||||||| |||||||||||||||||| |||||| |||||||||||||||| || | Sbjct 832 GCTTGCATGAAATGGGTGATGAGTCTAAGTCACTTCCTCTGTGGAGACAGGCTGAACCGA 891 Query 509 GATTTCTATGGAACAACTATATGTTAGAAGTTCTTATCGAAAATAAGCTTGATCAGTTCT 568 | ||||| |||||||| || ||||| |||||||| ||||| ||||||||||||||||||| Sbjct 892 GGTTTCTTTGGAACAATTACATGTTGGAAGTTCTCATCGATAATAAGCTTGATCAGTTCT 951 Query 569 TGCTTCCTA-CAATTTTCCTTAACCCTGCATCACGTTTTCATAGTTTTCAAACAGCCATT 627 ||||||| | || || | || | | | ||| |||| ||| ||||||||||| Sbjct 952 TGCTTCC-AGTAA--TT-C--AA----G--GGA-GCTTTAATAGCTTTGAAACAGCCATT 998 Query 628 GGAAGAGATATCGTTGACATTACTCTGATTGCTAGGAGATGCTCTAGAAGAAATGGTACG 687 ||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct 999 GGAAGAGATATTGTTGACATTACTCTGATTGCTAGGAGATGCACTAGGAGAAACGGTACA 1058 Query 688 CGCATGTGGCGACGAGGAGCTGACCCTGATGGTTATGTTGCTAATTTTGTGGAGACTGAG 747 || |||||| || ||||||| || | |||||| ||||||||||||||||||||||||||| Sbjct 1059 CGTATGTGGAGAAGAGGAGCGGATCTTGATGGCTATGTTGCTAATTTTGTGGAGACTGAG 1118 Query 748 CAAATTGTGC-GCATGAACGGATACACATCATCATTTGTTCAGGTTAGAGGATCCATGCC 806 |||||||| | | ||||| || || || ||||||||||||||||| |||||||||||||| Sbjct 1119 CAAATTGTACAG-ATGAATGGGTATACGTCATCATTTGTTCAGGTCAGAGGATCCATGCC 1177 Query 807 TTTTATGTGGGAGCAAATTGTAGATCTGACCTACAAGCCCAAGTTTGAGATTGTCCAACC 866 ||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 1178 TTTTATGTGGGAGCAGGTTGTAGATCTGACTTACAAGCCCAAGTTTGAAATTGTCCAACC 1237 Query 867 TGAAGAAGCTGTGA-GGATAGCTGAGCGTCACTTTCTCGG-CGTAAGGAAAAAATATGGA 924 |||||||||| | |||||||||||||||||||| | || | | ||||||||||||||| Sbjct 1238 TGAAGAAGCT-AAACGGATAGCTGAGCGTCACTTT-TTGGACCTTAGGAAAAAATATGGA 1295 Query 925 TCAGTTTTGGCGGTTGATCTTGTCAATAAGCATGGAGGTGAGGGGCGCCTAAGTGA-AAG 983 ||||||||||| |||||||| || || ||||| || |||||||||||| || | || || Sbjct 1296 TCAGTTTTGGCAGTTGATCTCGTTAACAAGCAAGGCGGTGAGGGGCGCTTATGCGAGAA- 1354 Query 984 GTTTGC-AGGTGCTATGCAGCACATCACTGGTGATGATGTAAGATACCTGCACTTTGATT 1042 || ||| | || |||||| ||||| ||||| |||||| |||| |||||||||||||||| Sbjct 1355 GTATGCTA-CTGTTATGCAACACATTACTGGGGATGATATAAGGTACCTGCACTTTGATT 1413 Query 1043 TCCATCACATATGTGGCCATATTCACTTTGAGCGCTTAGCAATTTTGTATGAGCAGATGG 1102 ||||||| || ||||| |||||||| |||||||||||| ||||| |||| |||||||| | Sbjct 1414 TCCATCAAATTTGTGGGCATATTCATTTTGAGCGCTTATCAATTCTGTACGAGCAGATCG 1473 Query 1103 AGGATTTCCTCGAGAAA-AACGGGTACTTTTTGTTTAATGAAAAGGGTGAGAAAATGAAG 1161 ||| ||| ||||| ||| || ||||||||| |||| |||||||||||||||||||||||| Sbjct 1474 AGGGTTTTCTCGA-AAAGAATGGGTACTTTCTGTTGAATGAAAAGGGTGAGAAAATGAAG 1532 Query 1162 GAGCAGCTTGGTATTGTGCGAACAAACTGCATAGATTGCTTAGACCGTACTAAT---A-- 1216 |||||||||||| |||| ||| |||||||||||||||||||||||||||| ||| | Sbjct 1533 GAGCAGCTTGGTGTTGTCCGATCAAACTGCATAGATTGCTTAGACCGTACAAATGTTACC 1592 Query 1217 --G--CATGATAGGCCGAAACATGTTGGAATTTCAACTCAAAAGGATTGGTGTTTTTGGT 1272 | ||||||||| ||||| ||||| ||| ||||||||||||||||||| |||||||| Sbjct 1593 CAGAGCATGATAGGTCGAAAGATGTTAGAAGTTCAACTCAAAAGGATTGGAGTTTTTGGC 1652 Query 1273 GCCGAAGAGGCTATAAGCTCGCATAAAAATTTTGATGAATGCTATAAGATATTGTGGGCT 1332 || ||||| | |||||||| ||| |||||||| ||| |||||| ||||| |||||| Sbjct 1653 GCTGAAGAAACCATAAGCTCACATCTGAATTTTGACGAACACTATAAAATATTATGGGCT 1712 Query 1333 AATCACGGTGATGACATTAGCATTCAATACTCCGGCACTCCTGCACTTAAAGGAGATTTT 1392 ||||| |||||||| || |||||||| ||||| || ||||||||||||||||||||||| Sbjct 1713 AATCATGGTGATGAAATCAGCATTCAGTACTCTGGTACTCCTGCACTTAAAGGAGATTTC 1772 Query 1393 GTCAGGTATGGTCAAAGGACTGTCCAAGGAGTCCTTCAAGATGGCTGGAA-TGCCCTC-G 1450 || |||||||| || |||||| ||| || |||||| ||||||| |||| | ||||| | Sbjct 1773 GTTAGGTATGGGCATCGGACTGCCCATGGTGTCCTTAAAGATGGTTGGAGCT-CCCTCAG 1831 Query 1451 CACGCTACTATCTGAACAATTTTGCTGATGGAACTAAGCAGGATGCAATTGATCT-TGTG 1509 |||||| || ||||| || ||||||||||||||||||||||||||||||||||| | || Sbjct 1832 -ACGCTATTACCTGAATAACTTTGCTGATGGAACTAAGCAGGATGCAATTGATCTCT-TG 1889 Query 1510 CAAGGACACTATATAGTTGCTGTGAGCCGAGACATGGCTCCTGTGCCTCGAAAGGGAGGT 1569 ||||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct 1890 CAAGGGCACTACATAGTTGCTGTGAGCCGAGACATGGCTCCTGTACCTCAAAAGGGAGGC 1949 Query 1570 CTTGAGGCTGTAGCTAACTTTCCGGTGGCTTTGATGGTGATTCTGATCAGTTTCTGGTTT 1629 |||||||||||||| ||||| || ||||| ||| | ||| ||||||| |||||||||||| Sbjct 1950 CTTGAGGCTGTAGCCAACTTCCCAGTGGCATTGTTCGTGGTTCTGATGAGTTTCTGGTTT 2009 Query 1630 GCAACAATGTCTGTCAAACAAGTTGGGAGT-AGT-TA----TAAGCACTTATTTTTCTCA 1683 |||||||||||| | |||||| ||||||| | | || ||||||||| || |||||| Sbjct 2010 GCAACAATGTCTCTAAAACAAACTGGGAGTGATTATAAGCATAAGCACTTGTTCTTCTCA 2069 Query 1684 TTTGTT-TGGGCGGGCATCAGTGTAG-C-TGTCGCAGCACTCGTGAGGGCCAATGGCCGG 1740 || ||| ||| |||| || | || | | || || ||||| ||||||||||||||| || Sbjct 2070 TT-GTTGTGGACGGGAATTTGCGTGGGCATG--GCTGCACTGGTGAGGGCCAATGGCAGG 2126 Query 1741 ATCTTCTGCAACCGGCCTTGTCTGCACAAGCCCAGA 1776 |||||||| ||||| ||| ||||||||||||||||| Sbjct 2127 ATCTTCTGTAACCGACCTCGTCTGCACAAGCCCAGA 2162 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 88152157020 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5