BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg497029
Length=3907
Score E
Sequences producing significant alignments: (Bits) Value
AT5G65950.1 | Symbols: | FUNCTIONS IN: molecular_function unkn... 6165 0.0
> AT5G65950.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1683, C-terminal (InterPro:IPR012880),
Foie gras liver health family 1 (InterPro:IPR021773);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source:
NCBI BLink). | chr5:26380123-26385221 FORWARD LENGTH=4001
Length=4001
Score = 6165 bits (3338), Expect = 0.0
Identities = 3745/3937 (95%), Gaps = 45/3937 (1%)
Strand=Plus/Plus
Query 1 CAAAGGCCCGTTAAAAGCCCACGT---A-G--TGTGTCAGATCTTTCCTTGCTCGATTCA 54
|||||||||||||||||||||||| | | ||||||||||| ||||||||||||||||
Sbjct 76 CAAAGGCCCGTTAAAAGCCCACGTAAAATGAATGTGTCAGATCCTTCCTTGCTCGATTCA 135
Query 55 ACGCGTCCGAGTCTCAGACACTCCCCGGCGAGATGGAGGAATACCCGGAAGAGCTCAGGA 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 136 ACGCGTCCGAGTCTCAGACACTCCCCGGCGAGATGGAGGAATACCCGGAAGAGCTCAGGA 195
Query 115 CGCCGCCGGTAAGTCTGGTGGCTCTCTTCGGATACTCGGAGCTACACGCGTCCATCACTA 174
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 196 CGCCACCGGTAAGTCTGGTGGCTCTCTTCGGATACGCGGAGCTACACGCGTCCATTACTA 255
Query 175 AGTATCTCCACTCCCAGCAGCCTCCCATCAACGCTCTGGCCTTTCCCGACTTCTCTCACA 234
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 256 AGTATCTCCACTCCCAGCAGCCTCCCATCAACGCTCTGGCCTTCCCCGACTTCTCTCAAA 315
Query 235 TCTCTCTCCTCCTTGCTCATGATGATCAGATCAGCCGAACCTCCTCCTTCAGAGATCCTC 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 316 TCTCTCTCCTCCTTGCTCATGATGATCAGATCAGCCGAACCTCCTCCTTCAGAGATCCTC 375
Query 295 TCAGCGT-TGCCGATTCTTCCTCTCCCATTCCTTCCAGATGCGGCGGCATCTTAAAACGG 353
||||||| | |||||||| | |||||||||||||||||||||||||| || || ||||||
Sbjct 376 TCAGCGTCT-CCGATTCTGCTTCTCCCATTCCTTCCAGATGCGGCGGTATTTTGAAACGG 434
Query 354 GACTGGTTGCTTAAGCATCGCACCAAGGTCCCTGCACTTGTCGCGGCCTTCTTTCCCTCA 413
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 435 GACTGGTTGCTTAAGCATCGCACCAAGGTCCCTGCACTTGTCGCCGCCTTCTTTCCCTCA 494
Query 414 CATCACATCTTCGGCGATCCAACTCAATGGCTACAGGTCTGCTCCGATCTCGACAGCCTC 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 495 CATCACATCTTCGGCGATCCAACTCAATGGCTACAGGTCTGCTCCGATCTCGACAGCCTC 554
Query 474 AAATCCGTAATCCGTCCCAAATACATCAAACTGGTGGTTGTCGTGGTCCAGTCCTCTCCC 533
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 555 AAATCCGTAATCCGTCCCAAAAACATCAAACTGGTGGTTGTCGTGGTCCAGTCTTCTCCC 614
Query 534 CATGAGGAAATTAGCGAAGATCGTCTGGTGGCATTGCGAAAGCGGGCAGAGTTAGATTCT 593
|| ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 615 CACGAGGACATTAGCGACGATCGTCTGGTGGCATTGCGAAAGCGGGCAGAATTAGATTCT 674
Query 594 AAGTACGTGCTCTTCTTCAATTCCAGCATAGACTCTGAACTCACACACTCTCTCTCC--A 651
||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| |
Sbjct 675 AAGTACGTGCTCTTCTTCAATTCCAGCATAGTCTCTGAACTCACGCTCTCTCTCTCCAGA 734
Query 652 ---------G-----GC--ATTTGGCCCTTGCTTATTACAGAGAAGAAGGACGGAGAATC 695
| || | ||||| ||| |||||||||||||||||||||||||||||
Sbjct 735 CTCGCTTCTGCTTTTGCAGAGTTGGCACTTTCTTATTACAGAGAAGAAGGACGGAGAATC 794
Query 696 AAAAGCCGAGTTGAGAAAAAGAGTTCCAATTCTCTTGATTTCAATGTTCGCTACTGTTTT 755
||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 795 AAAAGCCGAATTGAGAAAAGGAGTTCCAATTCTCTTGATTTGAATGTTCGCTACTGTTTT 854
Query 756 AAAGTCGCTGTATATGCAGAGTTTCGTAGAGATTGGGGTGAAGCACTCAAGTTTTATGAA 815
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 855 AAAGTCGCTGTATATGCAGAGTTTCGTAGAGATTGGGGTGAAGCACTGAAGTTTTATGAA 914
Query 816 GACGCATATCATTCCTTGCACGAGATGATCGGGACATCGACTAGGTTGCCTGCAATACAA 875
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 915 GACGCATACCATTCCTTGCACGAGATGATCGGGACATCGACTAGGTTGCCTGCAATACAA 974
Query 876 CGCTTGGTCGAGATCAAGATCATAGCTGAGCAATTGCATTTCAAGATATCGACGCTTTTG 935
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 975 CGCTTGGTCGAGATCAAAATCATAGCTGAGCAATTGCATTTCAAGATATCAACGCTTTTG 1034
Query 936 TTGCATGGTGGAAAACTCATAGAAGCAGTGACATGGTTTCATCAACATAAAGCATCATAT 995
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1035 TTGCATGGTGGAAAACTCATAGAAGCAGTGACATGGTTTCATCAACATAAAACATCATAT 1094
Query 996 GAAAAGGTTGTTGGATCCACAGACTTTATTTTTCTCCATTGGGACTGGATGAGTAGGCAG 1055
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1095 GAAAAGGTTGTCGGATCCACAGAATTTATTTTTCTCCATTGGGACTGGATGAGTAGGCAG 1154
Query 1056 TTTCTTGTCTTTGCTGAGTTGCTGGAGACAAGCTCAGCAACTGGTCAGAACTTTTCATCC 1115
||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 1155 TTTCTTGTCTTTGCTGAGTTGCTGGAGACAAGCTCAGCAACTGGTCAGAGCTTAACATCC 1214
Query 1116 TCGAACCAAGGAACTGCGGAAATATCTTTGACTGAGTTTGAGTTTTATCCTGCCTATTAT 1175
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1215 TCAAACCAAGGAACTGCGGAAATATCTTTGACTGAGTTTGAGTTTTACCCTGCCTATTAT 1274
Query 1176 TATCAGTTGGCTGCTCATTACTTGAAGGATAAGAAATCTGCCCTGGAACTGTTGTTGTCA 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1275 TATCAGTTGGCTGCTCATTACTTGAAGGATAAGAAATCTGCCCTGGAACTGTTGTTGTCA 1334
Query 1236 ATGTCTGAAATAGCTCAAGAGATTGATACCAGCTCTGCATCCATTACTCCTTCAGTCTAT 1295
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 1335 ATGTCTGAAATAGCTCAAGAGATTGATAGCAGCTCTGCATCTATTACTCCTTCAGTCTAT 1394
Query 1296 GTGGGTCAGTTCGCTCAGTTACTTGAGAAGGGAGAAACTCTTACTCTTCACTCTATAACG 1355
|||||||||||||||||||| ||||||||||||||| || |||| |||||||||||||||
Sbjct 1395 GTGGGTCAGTTCGCTCAGTTGCTTGAGAAGGGAGAAGCTATTACACTTCACTCTATAACG 1454
Query 1356 GATGAAGAATACAGACGGTATACATTTTCAGAAGCAAAGAGATTTCAGGATTCCCTTGAA 1415
|||||||| |||| |||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct 1455 GATGAAGAGTACACACGGTATACAATTTCAGAAGCAAAGAGAGTTCAGGATTCCCTTCAA 1514
Query 1416 ATTATTGCTTGGCTGAAGAGATCTTATGAATCATTTACGAACCTTAAAGCGCGGAGGATG 1475
|||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||
Sbjct 1515 ATTATTGCTTGGCTGAAGAGATCTTATGAATCATTTACCAACCTTAAAGCCCAGAGGATG 1574
Query 1476 GCTGCCCTTTGTGCCTTTGAACTAGCCCGGGAGTACTTTGATTCGGCTGATCCCAGCAAC 1535
||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||
Sbjct 1575 GCTGCTCTTTGTGCCTTTGAAGTAGCCCGGGAGTACTTTGATTTGGCTGATCCCAACAAC 1634
Query 1536 GCAAAATTCTTTTTCGATATTTCTGCAAACTTGTACAGACAAGAAGGTTGGGTAACTTTG 1595
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1635 GCAAAATTCTTTTTCGATATTGCTGCAAACTTGTACAGACAAGAAGGTTGGGTAACTTTG 1694
Query 1596 CTCTGGGAAGTGTTGGGTTACCTGCGAGAGTGTTCGAGAAATCTTGGTGCTTTGAAAGAT 1655
|||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 1695 CTCTGGGAGGTGTTGGGTTACCTGCGAGAGTGTTCGAGAAACCTTGATGCTTTGAAAGAT 1754
Query 1656 TTTGTAGAGTTTTCACTTGAAATGGTGGCACTGCCTGTAACATCTTATGACAATTCTGGG 1715
|||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct 1755 TTTGTAGAGTTTTCACTTGAAATGGTTGCCCTGCCTGTAACATCTTATGAGAATTCTGGG 1814
Query 1716 AACTTGAGAAACAAAAATTATGGTCCTGGAGGTCCTGCAACCATTTCAGGAAGAGAAAGT 1775
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1815 AACTTAAGAAACAAAAATTATGGTCCTGGAGGTCCTGCAACAATTTCAGGAAGAGAAAGT 1874
Query 1776 ATACATCAAGAAGTTTTTACTCTTGTCTGTCGTGAAGCCGAGCCGTTATCCTCTACCGAA 1835
|||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||
Sbjct 1875 ATACATCAAGAAGTTTTTACTCTTGTTTGTCGTGAAGCCGAGCTGTTATCATCTACCGAA 1934
Query 1836 GGAAGTGGGTTCAAATTAGCCACCGATAGCCCTCTTCATCTTGATATTGATCTTGTCAGT 1895
||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct 1935 GGAAGTGGGTTCAAATTAGCCACTGATAGCCCTCTTCATCTCGAGATTGATCTTGTCAGT 1994
Query 1896 CCTCTGAGACCCGTTCTCCTAGCTTCAGTTGCTTTTCACGAGCAAATGATCAAGCCTTGC 1955
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 1995 CCTCTGAGACCTGTTCTCCTAGCTTCAGTTGCTTTTCACGATCAAATGATCAAGCCTCAC 2054
Query 1956 ACTTTGTGCTCTTTTACATTGTCACTACTTTCTCATCTACCTCTTCCAGTTGAAATAGAT 2015
|||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 2055 GCTTTGTGCTCTTTTACGTTGTCACTACTTTCTCATTTACCTCTTCCAGTTGAAATAGAT 2114
Query 2016 CATCTAGAAGTTCAGTTCAACCAATCTACGTGCAACTTTGTCATCAGAAATTCCCAGAGG 2075
||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct 2115 CATCTAGAAGTTCAGTTTAATCAATCTACATGCAACTTTGTCATCAGAAATTCCCAGAGG 2174
Query 2076 CCTCTGTGGGCTTCTGCGTCTAACACTGTGAAAAGTGGTAGCCAAGTAGAGAATGAGCCA 2135
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 2175 CCTCTGTGGGCTTCGGCGTCTAACACTGTGAAAAGTGGTAGCCAAGTGGAGAATGCGCCA 2234
Query 2136 TCGCTGGTGCTTGTGCCGAATAATTGGTTAAGGTTGACATATGCAATCAATTCTGAGCAA 2195
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2235 TTGCTGGTGCTTGTGCCGAATAATTGGTTAAGGTTGACATATGCAATCAAGTCTGAGCAA 2294
Query 2196 AGCGGCAAGCTTGAGTGTCTTTCAGTTCTTGCAAAATTGGGGCCTCTTTTCACAATCTGT 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 AGCGGCAAGCTTGAGTGTCTTTCAGTTCTTGCAAAATTGGGGCCTCTTTTCACAATCTGT 2354
Query 2256 TCAAGAGCCGAGAGTCCTGCTGCAATGGAGGAATTGCCTGTCTGGAAGCATGAGAATAGC 2315
|||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| |
Sbjct 2355 TCAAGAGCCGAGAGTCCTGCTGCAATGGAGGATTTACCTGTCTGGAAGCATGAAAATCGT 2414
Query 2316 GTGGAATCTCTGCCAACGAAGGACCCTGTTCTTGCAGTATTTGGCCAGAAAGCTACTCAA 2375
|| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 2415 GTTGAATCTCTGCCAACAAAGGACCCAGTTCTTGCAGTATTTGGCCAGAAAGCTACTCAA 2474
Query 2376 ATTGATGAACCTGAACCACAGGTGGACGTCAGTCTAGGTGCTTCTGGTCCTGCCCTAGTT 2435
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2475 GTTGATGAACCCGAACCACAGGTGGACGTCAGTCTAGGTGCTTCTGGTCCTGCCCTAGTT 2534
Query 2436 GGAGAAGATTTTACGATGCCTATCGTGGTAACTTCAAAGGGTCATGCCGTATACAGTGGT 2495
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2535 GGAGAAGATTTTGCGATGCCAATCGTGGTAACTTCAAAGGGTCATGCCGTATACAGTGGT 2594
Query 2496 GAATTGAAGATTAATCTAGTTGATGTGGGTGGTGGGGGTTTGTTTAGCCCTAGAGAAGCA 2555
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 2595 GAATTGAAGATTAATCTAGTTGATGTGGGTGGTGGTGGTTTGTTTAGCCCAAGAGAAGCA 2654
Query 2556 GAACCGTTTTCTCTAGAAAGCCATCATGTTGAAATCTGTGGTATTGATGGGGCAGAGGGA 2615
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2655 GAACCGTTTTCTCTAGAAAGCCATCATGTTGAAATCTGTGGTATTGATGGGGCAGAGGGC 2714
Query 2616 AACGATGAGTCCGAGTCTGAAACAGGGGGCATAAAGAAAATTCAGCAATCTTTTGGGCTG 2675
||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2715 AACAATGAATCCGAGTCTGAAACAGGGAGCATAAAGAAAATTCAGCAATCTTTTGGGCTG 2774
Query 2676 GTTTCTGTTCCAGACCTGAAGGAAGGAGAATCATGGTCGTGCAAACTAGAAATAAAGTGG 2735
|||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 2775 GTTTCTGTTCCATACCTGAAGGAAGGAGAATCATGGTCGTGCAAACTGGAAATCAAGTGG 2834
Query 2736 CATAGACCCAAGCCTGTCATGCTTTTTGTGTCATTGGGTTACTTGCCACATGGCAGTGAA 2795
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2835 CATAGACCCAAGCCTGTGATGCTTTTTGTGTCATTGGGTTACTTGCCACATGGCAGTGAA 2894
Query 2796 GCCAATACCCAAAAACTTCACATACACAAGAGCTTGCAGATCGAAGGGAAGATGCCTCTT 2855
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2895 GCCAATACCCAAAAAGTTCACATACACAAGAGCTTGCAGATTGAAGGGAAGATGCCTCTT 2954
Query 2856 TTAATAAGCAATCGGTTTATGTTGCCATATAGAAGGGATCACCTATTGCTCAATAGGATC 2915
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2955 TTAATAAGCAATCGTTTTATGTTGCCATATAGAAGGGATCACCTATTGCTCAATAGGATA 3014
Query 2916 AAGCCAGCCCCTGATTCTGAAGACATGTCTTCTCTGCCTCTGAACGAAAAAAGTGTGTTA 2975
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 3015 AAGCCAGCCCCTGATTCTGAAGACGTGTCTTCTCTGCCGCTGAACGAAAAAAGTGTGTTA 3074
Query 2976 GTTGTCAGTGCCAAAAATTGCTCAGAAATAGCACTGGAACTGGTGTCCATGTCCATTGAA 3035
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 3075 GTTGTCAGTGCCAAAAATTGCTCAGAAATAGCGCTGAAACTGGTGTCCATGTCCATTGAA 3134
Query 3036 TTTGATGATGAACTAGGGGAAACTTCATGTTTGATTCAGCAGGGTAGTGGGTGTGGAGAT 3095
||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3135 TTTGATGATGAACAAGGGGAAACTTCATGTTTGATTCAGCAGGGTGGTGGGTGTGGAGAC 3194
Query 3096 TCCCCAAGCTCTGCTAATCTTGCGCCAGGGGAAGAGTTCAAAAAGGTTTTCACAGTCATA 3155
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3195 TCCCCAAGCTCTGCAAATCTTGCGCCAGGGGAAGAGTTCAAAAAGGTTTTCACAGTCATA 3254
Query 3156 CCAACGACGAGAACTCCAAAGCTTGGTTTGGGATCAGTACATTTAAAATGGAGGAGACAG 3215
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 3255 CCAACGACGAGAACTCCAAAGCTTGGTTTGGGATCAATACATTTAAAATGGAGGAGAGAG 3314
Query 3216 GGAGGTAACATAACAGAGGCATATGTTTCAACAAAGCACAAACTTCCTGAAGTAAATGTG 3275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3315 GGAGGTAACATAACAGAGGCATATGTTTCAACAAAGCACAAACTTCCTGAAGTAAATGTG 3374
Query 3276 GAGGCATCACCACTGGTAATGAGTTTGAACTCTCCTCCATATGCCATTCTTGGAGAACCC 3335
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3375 GAGGCATCACCACTGGTAATGAGTTTGGACTCTCCTCCATATGCCATTCTTGGAGAACCC 3434
Query 3336 TTCACTTACGCCGTTAGAATCTGCAACCAGACACAGTTGCTGCAAGAAGCAAAGTTTGCT 3395
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3435 TTCACTTACGCTGTTAGAATCTGCAACCAGACACAGTTGCTGCAAGAAGCAAAGTTTGGT 3494
Query 3396 CTGGCTGATGCACAGAGTTTTGTCCTGTCTGGGTCTCACAGCAATACGGTTTCAGTCCTT 3455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3495 CTGGCTGATGCACAGAGTTTTGTCCTGTCTGGGTCTCACAGCAATACGGTTTCAGTCCTT 3554
Query 3456 CCCAAGTCAGAACACGTCTTAAGTTATAAGCTAGTGCCTCTGACTTGTGGTGAACAGCAA 3515
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3555 CCCAAGTCAGAACACGTCTTAAGTTATAAGCTAGTGCCTCTGACTTGCGGTGAACAGCAA 3614
Query 3516 CTCCCAAAGATAACTGTGACATCAGCGCGATATTCTGCTGAGTTTCAGCCATCTGCGGTT 3575
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3615 CTCCCAAAGATAACTTTGACATCAGCGCGATATGCTGCTGAGTTTCAGCCATCTGCGGTT 3674
Query 3576 GCTTCAAGTGTCTTTGTGTTTCCCTCAGTCCCACAAGCCGAGAACGCTAACTCTACCA-C 3634
|||||||||||||||||||||||||||| ||||||||||||||| || | |||||||| |
Sbjct 3675 GCTTCAAGTGTCTTTGTGTTTCCCTCAGCCCCACAAGCCGAGAAAGCCATCTCTACCAGC 3734
Query 3635 AAAGTAGTGTAACTTCACGTGACTTGGGTTTTCGGATGTTGTCTATGCAGTTTCAGCCAT 3694
|| ||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||
Sbjct 3735 AA-GTAGTGTAACTTCGCATGACTTGGGTTTTCAGATGT---CTATGCAGTTTCAGCCAT 3790
Query 3695 ATGTGGGTTAAGTA-AGACATACTGAATCAGTTTGGTAAATTTTGGCCCTGAAGTGT-GT 3752
|||||| ||||| | ||||||| |||||||||||||||||||||| |||||||||| |
Sbjct 3791 ATGTGG-TTAAG-ACAGACATATTGAATCAGTTTGGTAAATTTTGATCCTGAAGTGTCG- 3847
Query 3753 CCTCTATGTTGTATTTTCTTCttttttttCCTTATGTTGTTGATAATAATGGCTATTTTT 3812
||| ||||||||||||| | |||| |||| |||||||||||||||||| |||||||
Sbjct 3848 CCT--ATGTTGTATTTTCAT-TTTT----CCTTCTGTTGTTGATAATAATGGATATTTTT 3900
Query 3813 -GAAGAACACATACTAGACACATAGGATTAGGAGACAATCTGTTTTGAGATATGTTT-GT 3870
| ||||| || ||||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct 3901 TGGAGAACCCAAACTAGACACATAGGATTAGGACACAATCTGTTTTGAGATGTGTTTTGT 3960
Query 3871 GGCAACTGTTTTTCTTTCAATGCAAAAAGTGTGTGTG 3907
|||||||||||||||||||||||||||||||||||||
Sbjct 3961 GGCAACTGTTTTTCTTTCAATGCAAAAAGTGTGTGTG 3997
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 194647738840
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5