BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg497051
Length=1812
Score E
Sequences producing significant alignments: (Bits) Value
AT4G13340.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 1958 0.0
AT3G24480.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 1184 0.0
AT4G18670.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 994 0.0
> AT4G13340.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr4:7758610-7761057 FORWARD LENGTH=2448
Length=2448
Score = 1958 bits (1060), Expect = 0.0
Identities = 1151/1194 (96%), Gaps = 10/1194 (1%)
Strand=Plus/Plus
Query 1 ATGAAGAAGACGATCCAAATCctcttcttcttcttcctcttcatcaatctcaccaa--ct 58
|||||||||||||| ||||||||| ||||||||||| || |||||||||||||||| ||
Sbjct 1 ATGAAGAAGACGATTCAAATCCTCCTCTTCTTCTTCTTCCTCATCAATCTCACCAACGCT 60
Query 59 ct-t---tct-ctc--acggcggtgttctctcCGATAACGAAGTCCGTCACATTCAACGC 111
|| | ||| ||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 61 CTCTCAATCTCCTCTGACGGCGGCGTTCTCTCCGATAACGAAGTCCGTCACATTCAACGC 120
Query 112 CGTCAATTACTCGAATTCGCCGAACGAAGCGTCAAAATCACCGTTGATCCTTCTCTAATC 171
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 121 CGTCAATTACTCGAATTCGCCGAACGAAGCGTCAAAATCACCGTTGATCCTTCTCTAAAC 180
Query 172 TTCGAGAATCCGAGATTACGAAATGCTTATATAGCTCTACAAGCTTGGAAACAAGCGATT 231
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TTCGAGAATCCGAGATTGCGAAATGCTTATATAGCTCTACAAGCTTGGAAACAAGCGATT 240
Query 232 CTCTCTGATCCAAACAATTTCACTTCGAATTGGATCGGATCCAATGTCTGTAACTACACC 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CTCTCTGATCCAAACAATTTCACTTCGAATTGGATCGGATCCAATGTCTGTAACTACACC 300
Query 292 GGAGTTTTCTGTTCTCCGGCCCTTGATAATCGGAAGATCCGTACCGTCGCCGGAATCGAT 351
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 301 GGAGTTTTCTGTTCTCCGGCGCTTGATAATCGGAAGATTCGTACCGTCGCCGGAATCGAT 360
Query 352 CTCAACCACGCCGATATCGCTGGTTATTTACCTGAAGAGCTTGGTTTGTTATCAGATCTC 411
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 CTCAATCACGCAGATATCGCTGGTTATTTACCTGAAGAGCTTGGTTTGTTATCAGATCTT 420
Query 412 GCTTTGTTTCATGTTAATTCAAACCGGTTTTGTGGTACTGTACCACACCGGTTTAACCGG 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 GCTTTGTTTCATGTTAATTCAAACCGGTTTTGTGGTACTGTACCACACCGGTTTAACCGG 480
Query 472 CTAAAGCTTTTATTCGAGCTTGATCTTAGTAACAACCGGTTCGCTGGGAAATTTCCGACG 531
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 481 CTTAAGCTTTTATTCGAGCTTGATCTTAGTAACAACCGGTTCGCTGGGAAGTTTCCGACG 540
Query 532 GTTGTCTTGCAATTACCATCGTTGAAGTTTTTAGATCTCCGGTTTAATGAATTTGAAGGA 591
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GTTGTCTTGCAATTACCGTCGTTGAAGTTTTTAGATCTCCGGTTTAATGAATTTGAAGGA 600
Query 592 ACTGTACCGAAAGAGCTTTTTAGTAAAGATCTTGACGCGATTTTTATAAACCATAACCGG 651
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 601 ACTGTACCGAAAGAGCTTTTTAGTAAAGATCTTGACGCGATTTTCATAAACCATAACCGG 660
Query 652 TTCCGGTTTGAGTTACCGGAGAATTTTGGTGATTCGCCGGTTTCGGTTATTGTTTTGGCG 711
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TTCCGGTTTGAATTACCGGAGAATTTTGGTGATTCGCCGGTTTCGGTTATTGTTTTGGCG 720
Query 712 AATAACCGGTTCCATGGTTGTGTACCTTCGAGTTTGGTGGAGATGAAGAATCTTAACGAG 771
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 721 AATAACCGGTTCCATGGTTGTGTACCATCGAGCTTGGTGGAGATGAAGAATCTTAACGAG 780
Query 772 ATCATCTTCATGAACAATGGTCTTAATTCTTGTTTACCGTCTGATATCGGACGGTTAAAG 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 ATCATCTTCATGAACAATGGTCTTAATTCTTGTTTACCGTCTGATATCGGACGGTTAAAG 840
Query 832 AACGTGACGGTGTTTGACGTCAGTTTTAACGAACTTGTTGGGCCGTTACCGGAGAGTGTT 891
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 841 AACGTGACGGTGTTTGACGTCAGTTTTAATGAACTTGTTGGGCCGTTACCGGAGAGTGTT 900
Query 892 GGTGAGATGGTTTCGGTGGAGCAGCTTAATGTGGCGCATAATAAGTTGTCGGGGAAGATT 951
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 901 GGTGAGATGGTTTCGGTGGAGCAGCTTAATGTGGCGCATAATATGTTGTCGGGGAAGATT 960
Query 952 CCGGCGAGTATTTGTCAGTTACCGAAGCTTGAGAACTTCACTTATAGTTACAATTTCTTT 1011
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 961 CCGGCGAGTATTTGTCAGTTACCGAAGCTTGAGAATTTCACTTATAGTTACAATTTCTTT 1020
Query 1012 ACTGGAGAAGCGCCTGTGTGTTTGAGGTTGCCGGAGTTTGATGATCGGAGAAATTGTTTG 1071
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 ACCGGAGAAGCGCCTGTGTGTTTGAGGTTGCCGGAGTTTGATGATCGGAGAAATTGTTTG 1080
Query 1072 CCGGGAAGACCTGCTCAGAGATCGCCTGGTCAATGTAAAGCTTTTTTGTCTCGTCCGCCG 1131
|||||||||||||||||||| || || || ||||||||||| ||||||||||||||||||
Sbjct 1081 CCGGGAAGACCTGCTCAGAGGTCTCCAGGGCAATGTAAAGCGTTTTTGTCTCGTCCGCCG 1140
Query 1132 GTGAATTGTGGATCGTTTAGTTGCGGTCGTTCTGTTTTGCCTCGTCCCTCCGGT 1185
|| |||||||||||||||||||| || |||||||| | ||||||||| ||||||
Sbjct 1141 GTAAATTGTGGATCGTTTAGTTGTGGCCGTTCTGTGTCGCCTCGTCC-TCCGGT 1193
Score = 774 bits (419), Expect = 0.0
Identities = 572/639 (90%), Gaps = 37/639 (6%)
Strand=Plus/Plus
Query 1195 TCTCCACCACCCACTCCGGTCTATTCCCCTCCTCCCCCACCTCCTTGTATAGAaccacca 1254
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1798 TCTCCACCACCCACTCCGGTCTATTCCCCTCCTCCCCCACCTCCTTGTATAG----A--A 1851
Query 1255 ccaccaccacctccaccGTGTATAGATTATTCA---CCTCCTCCTCCACCAGTCATTCAT 1311
|||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||
Sbjct 1852 CCACCACCACCTCCACCGTGTATAGAGTATTCACCTCCTCCTCCTCCACCAGTCGTTCAT 1911
Query 1312 TATAGCTCTCCGCCTCCACCGCCAGTCTACTACAGCTCTCCGCCACCTCCACCAGTCTAT 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1912 TATAGCTCTCCGCCTCCACCGCCAGTCTACTACAGCTCTCCGCCACCTCCACCAGTCTAT 1971
Query 1372 TACAGCTCTCCACCTCCTCCACCGCCGGTTCACTACAGCTCACCGCCACCACC-GCCAGT 1430
||||||||||||||||| |||||||||||||| |||||||| ||||||||||| | |||
Sbjct 1972 TACAGCTCTCCACCTCCGCCACCGCCGGTTCATTACAGCTCTCCGCCACCACCAGA-AGT 2030
Query 1431 CCATTAC-AGTTCTCCGCCGCCACCGCCAGTCCATTACAGCTCTCCGCCGCCGCCGCCAT 1489
||||||| | ||||||||| ||| | ||||| || ||||||||||| || ||||| ||||
Sbjct 2031 CCATTACCA-TTCTCCGCCTCCATCTCCAGTACACTACAGCTCTCCACCACCGCCACCAT 2089
Query 1490 CAGCTCCATGTGAAGAATCTCCTccaccagcaccggtggttcaccacagcccaccaccac 1549
||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |
Sbjct 2090 CAGCTCCATGTGAAGAATCTCCTCCACCAGCACCGGTAGTTCACCACAGTCCACCACCGC 2149
Query 1550 cggtggttcaccacagcccaccaccaccgccagt-agtccaccaaagcccaccaccgccg 1608
| |||||||||||||||||||||| || ||| | ||||||||||||||||||||||
Sbjct 2150 CCATGGTTCACCACAGCCCACCACCTCC---AGTGA-TCCACCAAAGCCCACCACCGCCA 2205
Query 1609 TCTCCTGAATATGAAGGACCACTTCCACCGGTCATCGGAGTATCATACGCCTCTCCTCCA 1668
||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct 2206 TCTCCTGAATATGAAGGACCACTACCACCGGTCATCGGCGTATCATACGCATCTCCTCCA 2265
Query 1669 CCACCGCCGTTCTATTGATTCTTTTGAGAAA-CACGAGACTGAAACGAT-GAC---A--- 1720
|||||||||||||||||||||||||| |||| ||||||||||||||||| ||| |
Sbjct 2266 CCACCGCCGTTCTATTGATTCTTTTG-GAAAACACGAGACTGAAACGATTGACGTGACAC 2324
Query 1721 GAT----T-GAAATACTATACGACGTCGTTGGTCAATTCTTACACAGAGAAAGaaaaaaa 1775
|| | |||| ||||||||||||||||| |||||||||||| | ||||| |||||||
Sbjct 2325 GAACAGATCGAAACACTATACGACGTCGTTG-TCAATTCTTACAAAAAGAAAAAAAAAAA 2383
Query 1776 -aa-TTATAAGAGAAAAAGAAATGGCTGATTAAAAAGTT 1812
|| |||||||| |||| |||||||||||||||| ||||
Sbjct 2384 GAAATTATAAGA-AAAA-GAAATGGCTGATTAAAGAGTT 2420
> AT3G24480.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr3:8901154-8902638 REVERSE LENGTH=1485
Length=1485
Score = 1184 bits (641), Expect = 0.0
Identities = 904/1030 (88%), Gaps = 22/1030 (2%)
Strand=Plus/Plus
Query 149 TCACCGTTGATCCTTCTCTAATCTTCGAGAATCCG-AGATTACGAAATGCTTATATAGCT 207
|||| || ||||| || |||||||||||||||||| | || || | |||||| ||||||
Sbjct 182 TCACAGTAGATCCATCACTAATCTTCGAGAATCCGCGGCTT-CGTAGTGCTTACATAGCT 240
Query 208 CTACAAGCTTGGAAACAAGCGATTCTCTCTGATCCAAACAATTTCACT-TCGAATTGGAT 266
|| ||||||||||||||||| |||||||||||||| || ||| ||||| | ||||||||
Sbjct 241 CTTCAAGCTTGGAAACAAGCTATTCTCTCTGATCCTAATAATATCACTGT-TAATTGGAT 299
Query 267 CGGATCCAATGTCTGTAACTACACCGGAGTTTTCTGTTCTCCGGCCCTTGATAATCGGAA 326
|||||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct 300 CGGATCCAATGTCTGTAACTACACCGGAGTTTTCTGTTCTAAAGCTCTTGATAACCGGAA 359
Query 327 GATCCGTACCGTCGCCGGAATCGATCTCAACCACGCCGATATCGCTGGTTATTTACCTGA 386
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 360 GATCCGTACCGTCGCCGGAATCGATCTCAACCACGCCGATATCGCTGGGTATTTACCTGA 419
Query 387 AGAGCTTGGTTTGTTATCAGATCTCGCTTTGTTTCATGTTAATTCAAACCGGTTTTGTGG 446
|||||||||||||||| ||||||| |||||||||||||||||||| || || || |||||
Sbjct 420 AGAGCTTGGTTTGTTAACAGATCTAGCTTTGTTTCATGTTAATTCGAATCGATTCTGTGG 479
Query 447 TACTGTACCACACCGGTTTAACCGGCTAAAGCTTTTATTCGAGCTTGATCTTAGTAACAA 506
|||||| || || ||| || | ||| |||||||| |||||||||||||||||||||||
Sbjct 480 TACTGTTCCTCATAAGTTCAAGCAGCTTAAGCTTTTGTTCGAGCTTGATCTTAGTAACAA 539
Query 507 CCGGTTCGCTGGGAAA-TTTCCGACGGTTGT-CTTGCAATTACCATCGTTGAAGTTTTTA 564
|||||||| || ||| ||||| ||||| || ||| || || || ||||||||||| |||
Sbjct 540 TCGGTTCGCCGG-AAAGTTTCCCACGGTGGTTCTT-CATTTGCCGTCGTTGAAGTTCTTA 597
Query 565 GATCTCCGGTTTAATGAATTTGAAGGAACTGTACCGAAAGAGCTTTTTAGTAAAGATCTT 624
||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||
Sbjct 598 GATCTCCGGTTTAATGAGTTTGAAGGAACCGTACCGAAAGAGCTTTTTAGTAAAAATCTA 657
Query 625 GACGCGATTTTTATAAACCATAACCGGTTCCGGTTTGAGTTACCGGAGAATTTTGGTGAT 684
|| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 658 GATGCGATTTTTATAAACCATAACCGGTTCCGGTTTGAGTTACCGGAAAATTTCGGTGAT 717
Query 685 TCGCCGGTTTCGGTTATTGTT-TTGGCGAATAACCGGTTCCATGGTTGTGTACCTTCGAG 743
|| |||||||||||||||||| ||| ||||||| | |||||||||||| | || ||||
Sbjct 718 TCTCCGGTTTCGGTTATTGTTCTTG-CGAATAATCATTTCCATGGTTGTATTCCGACGAG 776
Query 744 TTTGGTGGAGATGAAGAATCTTAACGAGATCATCTTCATGAACAATGGTCTT-AATTCTT 802
|||||||||||||||||||||||| ||||| || ||||||||||||||| || |||||||
Sbjct 777 TTTGGTGGAGATGAAGAATCTTAATGAGATTATTTTCATGAACAATGGT-TTGAATTCTT 835
Query 803 GTTTACCGTCTGATATCGGACGGTTAAAGAACGTGACGGTGTTTGACGTCAGTTTTAACG 862
|||||||| | ||||||||| |||| ||||| |||||||||||||| || |||||||| |
Sbjct 836 GTTTACCGGCGGATATCGGAAGGTTGAAGAATGTGACGGTGTTTGATGTTAGTTTTAATG 895
Query 863 AACTTGTTGGGCCGTTACCGGAGAGTGTTGGTGAG-ATGGTTTCGGTGGAGCAGCTT-AA 920
| |||||||| ||||| |||||||||||||||| | ||||| ||| |||||| || ||
Sbjct 896 AGCTTGTTGGTCCGTTGCCGGAGAGTGTTGGTG-GTATGGTGGAGGTTGAGCAG-TTGAA 953
Query 921 TGTGGCGCATAATAAGTTGTCGGGGAAGATTCCGGCGAGTATTTGTCAG-TTACCGAAGC 979
||| || |||||| ||| || ||||||||||||||||||||||||||| || || ||||
Sbjct 954 TGTTGCTCATAATTTGTTATCTGGGAAGATTCCGGCGAGTATTTGTCAGCTT-CCTAAGC 1012
Query 980 TTGAGAACTTCACTTATAGTTACAATTTCTTTACTGGAGAAGCGCCTGTGTGTTTGAGGT 1039
||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct 1013 TTGAGAATTTCACTTATAGTTATAATTTCTTTACTGGTGAAGCTCCTGTGTGTTTGAGGT 1072
Query 1040 TGCCGGAGTTTGATGATCGGAGAAATTGTTTGCCGGGAAGACCTGCTCAGAGATCG-C-C 1097
|| | ||||||||||||||||||||||||||||| |||||||||||||||||||| | |
Sbjct 1073 TGTCTGAGTTTGATGATCGGAGAAATTGTTTGCCCGGAAGACCTGCTCAGAGATCTTCAC 1132
Query 1098 TGGTCAATGTAAAGCTTTTTTGTCTCGTCCGCCGGTGAATTGTGGATCGTTTAGTTGCGG 1157
|| |||||| |||||| ||||| || || ||||| |||||||||| ||| |||| ||
Sbjct 1133 -GG-CAATGTTCAGCTTTCTTGTCACGGCCTTCGGTGGATTGTGGATCTTTTGGTTGTGG 1190
Query 1158 TCGTTCTGTT 1167
||||||||||
Sbjct 1191 TCGTTCTGTT 1200
> AT4G18670.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr4:10275462-10278491 REVERSE LENGTH=3030
Length=3030
Score = 994 bits (538), Expect = 0.0
Identities = 875/1033 (85%), Gaps = 42/1033 (4%)
Strand=Plus/Plus
Query 153 CGTTGATCCTTCTCTAATCTTCGAGAATCCGA-GA-TTACGAAATGCTTATATAGCTCTA 210
|||||| || |||||| ||||||||||||| | || || ||||||||||| ||||||||
Sbjct 198 CGTTGACCCATCTCTAGTCTTCGAGAATCC-ACGACTT-CGAAATGCTTACATAGCTCTT 255
Query 211 CAAGCTTGGAAACAAGCGATTCTCTCTGATCCAAACAATTTCACTTCGAATTGGATCGGA 270
||||||||||||||||| |||||||||||||||||||| ||||| | || ||||||||
Sbjct 256 CAAGCTTGGAAACAAGCTATTCTCTCTGATCCAAACAACTTCACAACAAACTGGATCGGT 315
Query 271 TCCAATGTCTGTAACTACACCGGAGTTTTCTGTTCTCCGGCCCTT-GATAATCGGAAGAT 329
|| |||| || | |||||||| |||| |||| |||||| | || ||||| || |||
Sbjct 316 TCTGATGTTTGCAGTTACACCGGCGTTTACTGTGCTCCGG-CTTTAGATAACCGCCGGAT 374
Query 330 CCGTACCGTCGCCGGAATCGATCTCAACCACGCCGATATCGCTGGTTATTTACCTGAAGA 389
|||||||||||||||||| ||||| |||||||| || || ||||||||| ||||| ||||
Sbjct 375 CCGTACCGTCGCCGGAATAGATCTAAACCACGCTGACATTGCTGGTTATCTACCTCAAGA 434
Query 390 GCTTGGTTTGTTATCAGATCTCGCTTTGTTTCATGTTAATTCAAACCGGTTTTGTGGTAC 449
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 435 GCTTGGTTTGTTAACAGATCTCGCTTTGTTTCATATTAATTCAAACCGGTTTTGTGGAAC 494
Query 450 TGTACCACACCGGTTTAACCGGCTAAAGCTTTTATTCGAGCTTGATCTTAGTAACAACCG 509
||||| || ||||||||||| || ||||||||||||||||||||||| ||||| |||||
Sbjct 495 CGTACCGCATCGGTTTAACCGTCTTAAGCTTTTATTCGAGCTTGATCTCAGTAATAACCG 554
Query 510 GTTCGCTGGGAA-ATTTCCGACGGTTGTC-TTGCAATTACCATCGTTGAAGTTTTTAGAT 567
|||||| || || ||| || || |||||| || || ||||| |||||||||||| | |||
Sbjct 555 GTTCGCCGG-AATATTCCCTACTGTTGTCCTT-CAGTTACCGTCGTTGAAGTTTCTGGAT 612
Query 568 CTCCGGTTTAATGAATTTGAAGGAACTGTACCGAA-AGAGCTTTTTAGTAAAGATCTTGA 626
|| ||||||| ||||| |||||| ||||||| || |||||| || || |||||||||||
Sbjct 613 CTAAGGTTTAACGAATTCGAAGGACCTGTACC-AAGAGAGCTCTTCAGCAAAGATCTTGA 671
Query 627 CGCGATTTTTATAAACCATAACCGGTTCCGGTTTGAGTTACCGGAGAATTTTGGTGATTC 686
||||||||||| |||||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 672 TGCGATTTTTATCAACCATAACCGGTTCCGGTTTGAGTTACCGGATAATTTGGGAGATTC 731
Query 687 GCCGGTTTCGGTTATTGTTTTGGCGAATAACCGGTTCCATGGTTGTGTACCTTCGAGTTT 746
|||||||| ||||||||| |||||||||| | ||||| |||||| | || |||||||
Sbjct 732 TCCGGTTTCCGTTATTGTTGTGGCGAATAATCATTTCCACGGTTGTATTCCGACGAGTTT 791
Query 747 GG-TGGAGATGAAGAATCTT-AACGAGATCATCTTCATG-AACAATGG-TCTTAATTCTT 802
|| || | |||| ||||||| || ||||||||||||||| || ||||| | |||||||||
Sbjct 792 GGGTG-ATATGAGGAATCTTGAA-GAGATCATCTTCATGGAA-AATGGGT-TTAATTCTT 847
Query 803 GTTTACCGTCTG-ATATCGGACGGTT-AAAGAACGTGACGGTGTTTGACGTCAGTTTTAA 860
|||||||||| | | ||||||||||| ||| ||||| ||||| ||||| ||||||||||
Sbjct 848 GTTTACCGTC-GCAGATCGGACGGTTGAAA-AACGTAACGGTATTTGATTTCAGTTTTAA 905
Query 861 CGAACTTGTTGGGCCGTTACCGGAGAGTGTTGGTGAGATGGTTTCGGTGGAGCAGCTTAA 920
||||||||||||| ||||||||| |||| |||| | |||||||||| |||||||| ||||
Sbjct 906 CGAACTTGTTGGGTCGTTACCGGCGAGTATTGGCGGGATGGTTTCGATGGAGCAG-TTAA 964
Query 921 -TGTGGCGCATAATA-AGTTGTCGGGGAAGATTCCGGCGAGTATTTGTCAGTTACCGAAG 978
|||||||||||||| | || || || ||||||||||||| |||||||||||| |||| |
Sbjct 965 ATGTGGCGCATAATAGA-TTCTCTGGTAAGATTCCGGCGACTATTTGTCAGTTGCCGAGG 1023
Query 979 CTTG-AGAACTTCACTTAT-AGTTACAATTTCTTTACTGGAGAAGC-GCCTGTGTGT-TT 1034
||| |||| ||||||| | ||||| |||||||| |||||||| || ||| || ||| ||
Sbjct 1024 -TTGGAGAATTTCACTT-TCAGTTATAATTTCTTCACTGGAGA-GCCGCCGGTTTGTCTT 1080
Query 1035 GAGGTTGCC-GGAGTTTGATGATCGGAGAAATTGTTTGCCGG-GAAGACCTGCTCAGAGA 1092
| ||||||| || ||||||||||||| | ||||||||||||| || ||||||| ||||||
Sbjct 1081 G-GGTTGCCTGG-GTTTGATGATCGGCGGAATTGTTTGCCGGCGA-GACCTGCGCAGAGA 1137
Query 1093 TCGCCTGGTCAATGTAAAGCTTTTT-TGTCTCGTCCGCCGGTGAATTGTGGATCGTTTAG 1151
|| || || |||||| ||||| | | |||| |||||||||| ||||||| || ||| |
Sbjct 1138 TCACCAGGGCAATGTGCGGCTTTCTCT-TCTCTTCCGCCGGTGGATTGTGGTTCCTTTGG 1196
Query 1152 TTGCGGTCGTTCT 1164
|| |||||||||
Sbjct 1197 ATGTGGTCGTTCT 1209
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89658173370
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5