BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg497078
Length=903
Score E
Sequences producing significant alignments: (Bits) Value
AT4G13180.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1448 0.0
> AT4G13180.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr4:7657196-7658197 REVERSE LENGTH=1002
Length=1002
Score = 1448 bits (784), Expect = 0.0
Identities = 863/902 (96%), Gaps = 2/902 (0%)
Strand=Plus/Plus
Query 1 AAATGGAGAAGAATCTAAGAAGCTCATCGTCTCTCCCTTTGGCCGGGCGTGTAGCTATAG 60
|||||||||| |||| |||||||||||||||||||||| | |||||||||||||||||||
Sbjct 32 AAATGGAGAATAATCCAAGAAGCTCATCGTCTCTCCCTCTAGCCGGGCGTGTAGCTATAG 91
Query 61 TGACTGGAGCCACAAGAGGCATGGGCCGTGAAATCGCGATTCATCTTCACTCTCTTGGCG 120
|||| |||||||| ||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 92 TGACCGGAGCCACCAGAGGCATGGGCCGTGAAATCGCGATTCACCTCCACTCTCTTGGTG 151
Query 121 CAAGAGTCACCATCAATTATGTCTCGAGCTCGTCAAAAGCTGAACTCTTGG-TGCAAGAA 179
||||||||||||||||||||||||||||||| ||||||||||||||||||| | | ||||
Sbjct 152 CAAGAGTCACCATCAATTATGTCTCGAGCTCATCAAAAGCTGAACTCTTGGTTTC-AGAA 210
Query 180 CTAAACGACTCATCTCAACCAAAGTCAGCGATCGCAGTTAGAGCAGATGTATCAGACCCG 239
|||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||
Sbjct 211 CTAAACGACTCATCTCAATTAAAGTCAGCGATCGCAGTTAAAGCAGATGTGTCAGACCCG 270
Query 240 GACCAAATCAACAACTTGTTTGATCAAACAGAACAAGAGTTCGGATCTAAAGTTCACATC 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 271 GACCAGATCAACAACTTGTTTGATCAAACAGAACAAGAGTTCGGATCTAAAGTTCACATC 330
Query 300 GTCGTGAATTGTGCAGGTGTTTTGGATCCAAAGTATCCATCTTTATCCGAGACCACACTA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 331 GTCGTGAATTGTGCAGGTGTTTTGGATCCAAAGTATCCATCTTTATCCGAGACGACACTA 390
Query 360 GAAGATTTCGACAAAACATTCACAATAAACACAAGAGGCTCTTTCTTGTGTTGCAAGGAA 419
||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 391 GAAGATTTCGATAACACATTCACAATAAACACAAGAGGGTCTTTCTTGTGTTGCAAGGAA 450
Query 420 GCAGCTAAAAGGGTTATGAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACATCAATG 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 451 GCAGCTAAAAGGGTTATGAGAGGAGGTGGTGGAAGAATCATTATGATGTCTACATCAATG 510
Query 480 GTTGGTGGTCTTGCCCCGGGTTATGGAGTTTACGCAGCATCAAAGGCCGCCGTGGAGACA 539
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 511 GTTGGTGGTCTCGCCCCGGGTTATGGAGTTTACGCAGCATCAAAGGCCGCCGTTGAGACA 570
Query 540 ATGGTGAAAGTGTTGGCAAAGGAGCTAAAGGGAAGCCGGATAACCGCGAATTGCGTGGCG 599
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 571 ATGGTGAAAGTGTTGGCGAAGGAGCTTAAGGGAAGCCGGATAACCGCGAATTGCGTGGCG 630
Query 600 CCAGGGCCGGTTGCAACGGAGATGTTTTATGCCGGAAAGAGTGATGAAATGGTGAAGATG 659
|||||||||||||| ||||||||||||||||| |||||||||||||||| |||||| |||
Sbjct 631 CCAGGGCCGGTTGCGACGGAGATGTTTTATGCTGGAAAGAGTGATGAAACGGTGAAAATG 690
Query 660 CTTGCAGGGGCTTGTCCTATGGGGAGGATTGGTGAGTCAAAGGATATTACCGAGATTGTA 719
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 691 CTTGCAGGGGCTTGTCCTATGGGGAGGATCGGTGAGTCAAAGGATATAACCGAGATTGTA 750
Query 720 GGGTTTTTGGCCGGTGATGGTGGGGAATGGATCAATGGTCAAGTTATTAGAGCCAATGGA 779
||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct 751 GGGTTTTTGGCCGGTGATGGTGGTGAATGGATTAACGGTCAAGTTATTAGAGCCAATGGA 810
Query 780 GGCTTTGTTGTCTAAAAAATGAAGAACTAACAATGAAATTTGATGTTGTCTTCTTCTTTT 839
||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||
Sbjct 811 GGCTTTGTTGTCTAATAAATGAAGAACTAACATTGGAATTTGATGTTGTCTTCTTCTTTT 870
Query 840 CGTGTGTTGAACTACTTTTATGTCAATGATGATGAGTTGTTTATTGGGCAAGACAATACT 899
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 871 CGTGTGTTGATCTACTTTTATGTCAATGATGATGAGTTGTTTATTGGGCAAGACAATACT 930
Query 900 TA 901
||
Sbjct 931 TA 932
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 44105581066
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5