BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg497125
Length=3128
Score E
Sequences producing significant alignments: (Bits) Value
AT4G12770.1 | Symbols: | Chaperone DnaJ-domain superfamily pro... 4202 0.0
AT4G12780.1 | Symbols: | Chaperone DnaJ-domain superfamily pro... 2846 0.0
AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-84... 185 2e-45
> AT4G12770.1 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:7506382-7511566 REVERSE LENGTH=3188
Length=3188
Score = 4202 bits (2275), Expect = 0.0
Identities = 2915/3208 (91%), Gaps = 107/3208 (3%)
Strand=Plus/Plus
Query 1 AAAACGAAGAAAAAAGAGAGCTCTTTT--GAAATCAAATGCTTTGATCTGATTCGTTAAT 58
||||||||| ||||| |||||| |||| |||||||||||||||||| |||||||||||
Sbjct 8 AAAACGAAG-AAAAA-AGAGCT-TTTTAAAAAATCAAATGCTTTGATCCGATTCGTTAAT 64
Query 59 GGCGACTCAGATCTGAAGATAATCTCATCTTCATTTCTGGTGGGC-AAATCTAAAGCTTT 117
|||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||||
Sbjct 65 GGCGACTCAGATCTGAAGATAACCTCTTCTTCATTTCTAGTGGGCAAAATCTAAAGCTTT 124
Query 118 TCGATTTCGGAGGTAGAGGAA-TTGAAGGAACCCAATGGATGATTTCACAGGATTGTTAG 176
|||| ||||||| |||| ||| || |||||| ||||||||||||||||||||||||||||
Sbjct 125 TCGAATTCGGAGCTAGA-GAATTTAAAGGAATCCAATGGATGATTTCACAGGATTGTTAG 183
Query 177 CGAGAGACTTCGGATTCAAACCTCAGGGCAAATCAGCTCCCATGGCTGCTCAATCGAACT 236
|||||||||||||||| |||||||| |||||||| || ||||||||| ||||||| ||||
Sbjct 184 CGAGAGACTTCGGATTGAAACCTCAAGGCAAATCTGCGCCCATGGCTTCTCAATCAAACT 243
Query 237 CTTCTGCTTCTGATTTCAACAGTTTCGCTTCTTCTTATAGCTTCGCCAAC-GCCGCCGGT 295
||||||| |||||||||||| ||||||||||||||||||||||||| | ||||| |||
Sbjct 244 CTTCTGCCGCTGATTTCAACACTTTCGCTTCTTCTTATAGCTTCGCC-TCTGCCGCTGGT 302
Query 296 AAAAAGTCGGAATCTTTGCCGGTGTTTGACGATCTTGGTCGAGATGGTGATGATCTTCTC 355
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 303 AAAAAGTCGGATTCTTTGCCGGTGTTTGACGATCTTGGTCGAGATGGTGATGATCTTCTC 362
Query 356 TTCAAAGATGTGTTTAGCGGACCACCACCAAAGTACGGATCCTCTTCTGGGGATTCTCGT 415
|||| |||||||||||||||||||||||||||||| ||| |||||||| |||||||||
Sbjct 363 TTCAGAGATGTGTTTAGCGGACCACCACCAAAGTATGGA---TCTTCTGGTGATTCTCGT 419
Query 416 TCTCCACCTGCTTCTGCTTTTGACTATGATGCTATGTTCAAGGAACCCAAATCCAAACCG 475
|||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 420 TCTCCATCTGCTCCTGCTTTTGACTATGATGTTATGTTCAAGGAACCCAAATCCAAATCA 479
Query 476 GCGTCGTCCATGCCGGTCTATGACAAGCCTGTGTATGATGATGAGGATGTGTTTGAGTCT 535
|||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 480 GCGTCGTCTATGCCGGTTTATGATAAGCCTGTGTATGATGATGAGGATGTGTTTGAGTCT 539
Query 536 ATTCCTGAGCTCAAAATCCCATCCACTTCTTCTCAATCTGCTAGGTTTGATG-ATG-TTT 593
|||||||||||||||||||| |||||||||||||| || ||||||||||| | ||| |||
Sbjct 540 ATTCCTGAGCTCAAAATCCCTTCCACTTCTTCTCAGTCAGCTAGGTTTGA-GAATGTTTT 598
Query 594 -TC-TC--T-TCA-C--CTCCT---AAGCACAGGAAACAGAACAGTTCTCCTTTTGATGA 642
|| || | ||| | ||||| ||||||||||||||||||||||||||||| |||||
Sbjct 599 CTCTTCTATCTCATCTTCTCCTACGAAGCACAGGAAACAGAACAGTTCTCCTTTCGATGA 658
Query 643 TCTCATGGGCAACAATTTGGGGAAGAGAGGGACAGAGAGTGACCGAGAGGAGAAGGCTAG 702
||||||||| |||||||||||| | ||| | ||||||||||||||||||||||| |||
Sbjct 659 TCTCATGGGAAACAATTTGGGG-A-AGA---A-AGAGAGTGACCGAGAGGAGAAGGGTAG 712
Query 703 CTCCATTTTTGATGACTTGATTCCCGGGTTTGGTCGCACTAGCTCTCCTCCTCCTAAACG 762
|||||||||||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct 713 TTCCATTTTTGATGATTTAATTCCCGGGTTTGGTCGCACTAGCTCTCCTCCAGCTAAACG 772
Query 763 GACAACTTCAGAGACAACAAATCAATCCCAGAAACCTCCGTATCGGACTGCCGAGACATC 822
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 773 GACAACTTCAGAGACAACTAGTCAATCCCAGAAACCTCCGTATCGGACTGCCGAGACATC 832
Query 823 TTCCAATGTGGAAGAAGACCCATTTGTAGTCTTGGAGGAGTCTGCATCAAGCCC-TAGAG 881
||| |||||| |||||||||||||||||||||||||||||||| |||||| ||| |||||
Sbjct 833 TTCTAATGTGAAAGAAGACCCATTTGTAGTCTTGGAGGAGTCTACATCAA-CCCTTAGAG 891
Query 882 AACCTTCCACGGGAGGGTTCACTGATCCATTGGAGGATATTGGTAAATTCAACAGCAGAA 941
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 892 AACCTTCCACAGGAGGGTTCACTGATCCATTGGAGGAAATTGGTAAATTCAACAGCAGAA 951
Query 942 AAACTG---ATTCATCTGTCCACGAAGGAGTGTTTGCTGACACTGATCCTCTAAATAGTC 998
|||||| ||||||||||||||| |||||| |||| ||| ||||||||||| ||||||
Sbjct 952 AAACTGATCATTCATCTGTCCACGGAGGAGTATTTGTTGATACTGATCCTCTCGATAGTC 1011
Query 999 TTGGAAAACCAGGGCCAGATATGAATAGTAGAGGCAAGAGT-ATTTTAAGACCACCAGGA 1057
|||||||| |||||||||||||||||||||||||||||||| | |||||| |||||||||
Sbjct 1012 TTGGAAAATCAGGGCCAGATATGAATAGTAGAGGCAAGAGTCA-TTTAAGGCCACCAGGA 1070
Query 1058 AACATCAGTGGCTCCCAGTCACCACCAGTAGAAAGTCCTGGGAGTTACCGTTCTAAGAAA 1117
||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||
Sbjct 1071 AACATCAGTGGCTCCCAGT---CACCAGTAGAAAGTTCTGGGCTTTACCATTCTAAGAAT 1127
Query 1118 GTTTCATTTGATGATGTTTTAGAGCCACGGAATACGAGTGCTCCGCCACCTACCAGTTCA 1177
|||||||||||||||||| ||||||| | |||||||||| |||| |||||||||| ||||
Sbjct 1128 GTTTCATTTGATGATGTTGTAGAGCCGCAGAATACGAGTACTCCACCACCTACCAATTCA 1187
Query 1178 AATGGAAGTTTTGAGTCATCTGATGATGTTTGGCTTACTGTATCCGAGATCCCCCTCTTT 1237
||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1188 GATGGAAGTTTTGAATCATCTGATGATGTGTGGCTTACTGTATCTGAGATCCCCCTCTTT 1247
Query 1238 ACGCAACCTACGAGTGCTCCGCCACCTACGAGACCTCCACCACCAAGACCTACACGTCCT 1297
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1248 ACGCAACCTACGAGTGCTCCACCACCTACGAGACCTCCACCACCAAGACCTACACGTCCT 1307
Query 1298 ATAAAAAAGAGGGTTAACGAGCCTTCTATACCGACCTCTACTAACCACTCACACGTTCTT 1357
|| ||||||| |||||| ||||||||||||||||| ||| || ||||||||||||||| |
Sbjct 1308 ATTAAAAAGAAGGTTAATGAGCCTTCTATACCGACGTCTGCTTACCACTCACACGTTCCT 1367
Query 1358 AGCACAGCTAGAGCTTCTGTAAATAGCCCGACAGCATCTCAAATGGATGAACTTGACGAT 1417
||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1368 AGCTCAGGAAGAGCTTCTGTAAATAGCCCGACAGCATCTCAAATGGATGAACTCGACGAT 1427
Query 1418 TTTTCTATTGGCAGAAATCAGACCGCTGCTAATGGATATCCTGATCCTCCCTCTGGTGAA 1477
||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||
Sbjct 1428 TTTTCTATTGGCAGAAATCAGACAGCTGCGAATGGATATCCTGATCCTTCCTCTGGTGAA 1487
Query 1478 GATTCAGATATTTTTTCTGCTGCCGCTGCATCAGCTGCTGCCATGAAGGATGCCATGGAT 1537
||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 1488 GATTCAGATGTTTTTTCTACTGCAGCTGCATCAGCTGCTGCCATGAAGGATGCCATGGAT 1547
Query 1538 AAAGCAGAAGCAAAGTTTAGGCATGCTAAGGAAAGGAGAGTGAAAGAAAATTTGAAGGCA 1597
|||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||
Sbjct 1548 AAAGCAGAAGCAAAGTTTAGGCATGCTAAGGAAAGGAGGGAGAAAGAAAGTTTGAAGGCA 1607
Query 1598 AGTAGAAATAGAGAAGAAGATCAAACAGAGAATTATGATTCTCGTGAAAGGGAACTTAGA 1657
||||||| |||||||| ||||| || || ||||||||||||||||||||||||||||||
Sbjct 1608 AGTAGAAGTAGAGAAGGCGATCACACGGAAAATTATGATTCTCGTGAAAGGGAACTTAGA 1667
Query 1658 GAAAATCAAGTGAGATTGGACCGTGAAagggcagagagggaggcagagatggtaaaagag 1717
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 1668 GAAAAGCAAGTGAGATTGGACCGTGAAAGGGCAGAGAGGGAGGCAGAGATGGAAAAA-AC 1726
Query 1718 c-aggagagggagagagaggagagagaaagagagcagaagagaattgagagagaaaggga 1776
| ||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1727 CCAGGCGAGGGAGAGAGAGGAGAGAGAAAGAGAGCAGAAAAGAATTGAAAGAGAAAGGGA 1786
Query 1777 aagaCTGTTGGCTAGACAGGCGGTAGAGAGGGCTACAAGAGAAGCACGCGAAAGAGCAGC 1836
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1787 AAGACTGTTGGCTAGACAGGCGGTAGAGAGGGCTACAAGGGAAGCACGCGAAAGAGCAGC 1846
Query 1837 CACTGAAGCTCATGCGAAAGTTCAAAGAGCTGCTGTTGGGAAGGCTACCGATGCCCGAGA 1896
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 1847 CACTGAAGCTCATGCGAAAGTTCAAAGAGCTGCTGTTGGGAAGGTTACTGATGCCCGAGA 1906
Query 1897 ACGCGCCGAAAGAGCAGCGGTTCAAAGAGCCCATGCTGAAGCACGTGAAAGGGCAGCTGC 1956
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1907 GCGCGCCGAAAGAGCAGCAGTTCAAAGAGCCCATGCTGAAGCACGTGAAAGGGCAGCTGC 1966
Query 1957 AGGGGCAAGAGAAAAGGCTGCGAAAGCTGCGGCAGAAGCTAGAGAAAGGGTGAATGCTGA 2016
||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||
Sbjct 1967 TGGGGCAAGAGAAAAGGCTGAGAAAGCTGCAGCAGAAGCTAGAGAAAGGGCGAATGCTGA 2026
Query 2017 AGCGCGGGAGAAGGAAGCAAGGGTTAGGGCAGAACGAGCTGCTGTGGAAAGGGCCGCTGC 2076
|| |||||| |||||||||| |||||||||||||||||||||||| |||||||| |||||
Sbjct 2027 AGTGCGGGAAAAGGAAGCAAAGGTTAGGGCAGAACGAGCTGCTGTTGAAAGGGCAGCTGC 2086
Query 2077 TGAGGCACGTGGAAGGGCAGCTGCCCAAGCTAAAGCTAAGCAGCAGCAAGAAAATAACAA 2136
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||
Sbjct 2087 TGAGGCACGTGGAAGGGCAGCTGCTCAAGCTAAAGCTAAGCAGCAGCAAGAGAATAATAA 2146
Query 2137 TGATCTTGACTCCTTCTTTAGCTCAATTTCTAGACCAAACAGTGCTCCACGACAGAGAAC 2196
|||||||||||||||||||| ||| |||||||||||| ||||| |||| ||||||||||
Sbjct 2147 TGATCTTGACTCCTTCTTTAACTCGGTTTCTAGACCAAGCAGTGTTCCAAGACAGAGAAC 2206
Query 2197 CAACCCTCTGGATCCTTTCCAGGATTCATGGAACAAAGGAGGATCTTTCGAATCTAGCAG 2256
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2207 CAACCCTCCGGATCCTTTCCAGGATTCATGGAACAAAGGAGGATCTTTTGAATCTAGCAG 2266
Query 2257 GGAATCTTCGCGAGTGCCTTCTGGCCCAACAGAGAACTTGAGAAAGGCCTCTTCAGTAAC 2316
| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 2267 GCCATCTTCGCGAGTGCCTTCTGGCCCTACAGAGAACTTGAGAAAGGCCTCTTCAGCAAC 2326
Query 2317 AAACATTGTTGATGATCTCAGTTCAATATTTGGAGTTCCAGCTACCCAATCTGGTGGGTT 2376
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 2327 AAACATTGTTGATGATCTCAGTTCAATATTTGGAGCTCCAGCTTCCCAATCTGGTGGGTT 2386
Query 2377 TCAAGATGTTGATGGAGAAACTGAAGAGAGACGACGTGCCAGGCTGGAACGCCACCAGAG 2436
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2387 TCAAGATGTTGATGGAGAAACTGAAGAGAGACGACGTGCCAGGCTGGAACGTCACCAGAG 2446
Query 2437 GACACAGGAGCGGGCTGCAAAAGCACTTGCTGAGAAAAATGAACGTGATCTACAAGTACA 2496
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2447 GACACAGGAGCGGGCTGCAAAAGCACTTGCTGAGAAAAATGAACGTGATCTTCAAGTACA 2506
Query 2497 AAGAGAACAAGTTGAGAAAGATAGGATTGG-GGTGACTTTGGATGTGGAGATAAAACGTT 2555
||||||||||| |||||||||||||||||| || ||| ||||||| ||||||| |||||
Sbjct 2507 AAGAGAACAAGCTGAGAAAGATAGGATTGGTGG-GACCCTGGATGTTGAGATAAGACGTT 2565
Query 2556 GGGGTGCAGGGAAGGAGGGAAACCTGCGAGCTCTGCTTTCGACATTACAATATGTTCTTT 2615
||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||
Sbjct 2566 GGGGTGCAGGGAAGGAGGGAAACTTGCGTGCTCTGCTTTCAACATTACAATATGTTCTTT 2625
Query 2616 GGCCAGAATGTGGTTGGCAGCCTGTTTCATTGACCGATTTAATTAC-GGCTGCATCTGTC 2674
|||||||||| |||||||||||||| || ||||||||||||||||| || ||||||||||
Sbjct 2626 GGCCAGAATGCGGTTGGCAGCCTGTATCGTTGACCGATTTAATTACCGG-TGCATCTGTC 2684
Query 2675 AAGAAAGTTTACAGGAAGGCCACTCTCTGTATACACCCTGACAAAGTTCAACAAAAAGGT 2734
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 2685 AAGAAAGTTTACAGGAAGGCCACTCTCTGTATACATCCTGACAAAGTTCAGCAAAAAGGA 2744
Query 2735 GCCAATCTCCAGCAGAAATACATTGCCGAGAAAGTTTTTGACATGCTCAAGGAAGCATGG 2794
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2745 GCCAATCTCCAGCAGAAATACATTGCCGAGAAAGTTTTCGACATGCTCAAGGAAGCATGG 2804
Query 2795 AACAAGTTCAACTCAGAAGAACTCTTCTGAAAAAA--TG---T--TGTTC--G----TG- 2840
||||| ||||||||||| |||||||| |||||||| || | |||| | ||
Sbjct 2805 AACAAATTCAACTCAGAGGAACTCTTTTGAAAAAACCTGAGATAATGTTTTTGAGAGTGT 2864
Query 2841 G--GT-CGCC-C-AT----AA-GATGAATCATTTGGCATTCATTA-AAT---A--GCCAA 2884
| || || | | | || |||||| ||| ||||||||||| ||| | |||||
Sbjct 2865 GTTGTTCGTCTCTAGCGCGAAAGATGAAGCATGTGGCATTCATTCGAATTCGAAAGCCAA 2924
Query 2885 AA-TGGTGCCCAAGTTGGAGGCAGATAGTTGTGGATAGAGTATGTATTCCC-AGGATTGA 2942
|| |||||||||||||||| ||||| |||||| |||||||||||||||||| || | |||
Sbjct 2925 AAATGGTGCCCAAGTTGGAAGCAGAGAGTTGTCGATAGAGTATGTATTCCCCAG-ACTGA 2983
Query 2943 TTACCCATCACTGCATCATTATAGAC-ATCGCAGTAATTGGGCATTCATTTTTT-GTTA- 2999
||||||||||||||||||| ||| || | ||||| || ||||||||| |||||| |||
Sbjct 2984 TTACCCATCACTGCATCATCATATACCA-CGCAGCAACTGGGCATTCTTTTTTTTGTTGC 3042
Query 3000 -AATTTT-CCTTGTCATTATCCT-T-CTT---GAGTCTC--GTCCT-T-TAA-GAAAT-G 3046
|||||| |||| |||||| ||| | ||| |||| | ||| | || || | |
Sbjct 3043 TAATTTTTCCTTCTCATTACCCTCTTCTTCAAGAGTATGATGTCAAATGTATTGATGTTG 3102
Query 3047 TATT--G-ATGAAAA---CACAATACTTGAGAGCTGTGTATTGTTGTTTCCAAACTATTT 3100
||| | || |||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 3103 AATTCTGTATCAAAAAAACACAATACTTGAGAGCTGTGTATTCTTGTTTCCAAACTATTT 3162
Query 3101 ATATATATGCATATATGAATATTCTTTT 3128
|||||| ||||||||||| ||||||||
Sbjct 3163 ATATAT--GCATATATGAACATTCTTTT 3188
> AT4G12780.1 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:7512047-7517005 FORWARD LENGTH=3218
Length=3218
Score = 2846 bits (1541), Expect = 0.0
Identities = 1874/2030 (92%), Gaps = 41/2030 (2%)
Strand=Plus/Plus
Query 7 AAG-AAAAAAGAGAGCTCTTTT-GAAATCAAATGCTTTGATCTGATTCGTTAATGGCGAC 64
||| ||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct 6 AAGAAAAAAAGAGAGCTTTTTTAAAAATCAAATGCTTTGATCCGATTCGTTAATGGCGAC 65
Query 65 TCAGATCTGAAGATAATCTCATCTTCATTTCTGGTGGGC-AAATCTAAAGCTTTTCGATT 123
|||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
Sbjct 66 TCAGATCTGAAGATAATCTCTTCTTCATTTCTGGTGGGCAAAATCTAAAGCTTTTCGAAT 125
Query 124 TCGGAGGTAGAGGAA-TTGAAGGAACCCAATGGATGATTTCACAGGATTGTTAGCGAGAG 182
|||||| |||| ||| || |||||| ||||||||||||||||||||||||||||||||||
Sbjct 126 TCGGAGCTAGA-GAATTTAAAGGAATCCAATGGATGATTTCACAGGATTGTTAGCGAGAG 184
Query 183 ACTTCGGATTCAAACCTCAGGGCAAATCAGCTCCCATGGCTG-CTCAATCGAACTCTTCT 241
|||||||||| ||||||||||| ||||||||||||||||| | |||||||||||||||||
Sbjct 185 ACTTCGGATTGAAACCTCAGGGAAAATCAGCTCCCATGGC-GTCTCAATCGAACTCTTCT 243
Query 242 GCTTCTGATTTCAACAGTTTCGCTTCTTCTTATAGCTTCGCCAACGCCGCCGGTAAAAAG 301
|| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 244 GCCGCTGATTTCAACACTTTCGCTTCTTCTTATAGCTTCGCCACCGCCGCCGGTAAAAAG 303
Query 302 TCGGAATCTTTGCCGGTGTTTGACGATCTTGGTCGAGATGGTGATGATCTTCTCTTCAAA 361
|| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 304 TCCGATTCTTTGCCGGTGTTTGACGATCCTGGTCGAGATGGTGATGATCTTCTCTTCAAA 363
Query 362 GATGTGTTTAGCGG---ACCACCACCAAAGTACGGATCCTCTTCTGGGGATTCTCGTTCT 418
||||||||||| || ||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct 364 GATGTGTTTAGTGGACCACCACCACCAAAGTACGGATCTTCTTCTGGTGATTCACGTTCT 423
Query 419 CCACCTGCTTCTGCTTTTGACTATGATGCTATGTTCAAGGAACCCAAATCCAAACCGGCG 478
||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 424 CCATCTGCTCCTGCTTTTGACTATGATGCTATGTTCAAGGAACCCAAATCCAAATCAGCG 483
Query 479 TCGTCCATGCCGGTCTATGACAAGCCTGTGTATGATGATGAGGATGTGTTTGAGTCTATT 538
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 TCGTCTATGCCGGTTTATGACAAGCCTGTGTATGATGATGAGGATGTGTTTGAGTCTATT 543
Query 539 CCTGAGCTCAAAATCCCATCCACTTCTTCTCAATCTGCTAGGTTTGATG-ATG-TTT-TC 595
||||||||||||||||| |||||||||||||| || ||||||||||| | ||| ||| ||
Sbjct 544 CCTGAGCTCAAAATCCCTTCCACTTCTTCTCAGTCAGCTAGGTTTGA-GAATGTTTTCTC 602
Query 596 -TC--T-TCA-C--CTCCT---AAGCACAGGAAACAGAACAGTTCTCCTTTTGATGATCT 645
|| | ||| | ||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 603 TTCTATCTCATCTTCTCCTACGAAGCACAGGAAACAGAACAGTTCTCCTTTCGATGATCT 662
Query 646 CATGGGCAACAATTTGGGGAAGAGAGGGACAGAGAGTGACCGAGAGGAGAAGGCTAGCTC 705
|||||| |||||||||||||||| |||| |||| ||||||||||||||||||| ||| ||
Sbjct 663 CATGGGAAACAATTTGGGGAAGAAAGGGGCAGATAGTGACCGAGAGGAGAAGGGTAGTTC 722
Query 706 CATTTTTGATGACTTGATTCCCGGGTTTGGTCGCACTAGCTCTCCTCC-TCCTAAACGGA 764
|||||||||||| |||||||| |||||||||||||||||||||||||| | |||| ||||
Sbjct 723 CATTTTTGATGATTTGATTCCTGGGTTTGGTCGCACTAGCTCTCCTCCAT-CTAAGCGGA 781
Query 765 CAACTTCAGAGACAACAAATCAATCCCAGAAACCTCCGTATCGGACTGCCGAGACATCTT 824
|||||||||||||||||||||||||| ||||| |||| ||||| ||||||||||||||||
Sbjct 782 CAACTTCAGAGACAACAAATCAATCCGAGAAAGCTCCATATCGAACTGCCGAGACATCTT 841
Query 825 CCAATGTGGAAGAAGACCCATTTGTAGTCTTGGAGGAGTCTGCATCAAGCCCTAGAGAAC 884
||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||
Sbjct 842 CCAATGTGGAAGAAGACCCGTTTGTAGTCTTGGAGGAGTCTGAATCAACCCCTAGAGAAC 901
Query 885 CTTCCACGGGAGGGTTCACTGATCCATTGGAGGATATTGGTAAATTCAACAGCAGAAAAA 944
| ||| | | | |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 902 CCTCC-C------G-T-ACTGATCCATTGGACGATATTGGTAAATTCAACAGCAGAAAAA 952
Query 945 CTG---ATTCATCTGTCCACGAAGGAGTGTTTGCTGACACTGATCCTCTAAATAGTCTTG 1001
||| ||||||||||||||| |||||| |||| ||| | ||| ||||| ||| ||| |
Sbjct 953 CTGATCATTCATCTGTCCACGGAGGAGTATTTGTTGATATTGACCCTCTTGATAATCTAG 1012
Query 1002 GAAAACCAGGGCCAGATATGAATAGTAGAGGCAAGAGT-ATTTTAAGACCACCAGGAAAC 1060
||||||||||||| ||||||||||||| ||| |||||| | |||||||||||||||||||
Sbjct 1013 GAAAACCAGGGCCGGATATGAATAGTAAAGGGAAGAGTCA-TTTAAGACCACCAGGAAAC 1071
Query 1061 ATCAGTGGCTCCCAGTCACCACCAGTAGAAAGTCCTGGGAGTTACCGTTCTAAGAAAGTT 1120
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1072 ATCAGTGGCTCCCAGTCACCACCAGTAGAAAGCCCTGGGAGTTACCATTCTAAGAAAGTT 1131
Query 1121 TCATTTGATGATGTTTTAGAGCCACGGAATACGAGTGCTCCGCCACCTACCAGTTCAAAT 1180
|||||||| ||| |||||||||||| |||| |||| |||| |||||||||| |||||||
Sbjct 1132 TCATTTGAAGATTTTTTAGAGCCACATAATATGAGTACTCCACCACCTACCAATTCAAAT 1191
Query 1181 GGAAGTTTTGAGTCATCTGATGATGTTTGGCTTACTGTATCCGAGATCCCCCTCTTTACG 1240
|||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1192 GGAAGTTTCGAGTCGTCTGATGATGTGTGGCTTACTGTATCCGAGATCCCCCTCTTTACG 1251
Query 1241 CAACCTACGAGTGCTCCGCCACCTACGAGACCTCCACCACCAAGACCTACACGTCCTATA 1300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 CAACCTACGAGTGCTCCGCCACCTACGAGACCTCCACCACCAAGACCTACACGTCCTATT 1311
Query 1301 AAAAAGAGGGTTAACGAGCCTTCTATACCGACCTCTACTAACCACTCACACGTTCTTAGC 1360
||||||| |||||| ||||||||||||||||| ||| || ||||||||||||||| ||||
Sbjct 1312 AAAAAGAAGGTTAATGAGCCTTCTATACCGACGTCTGCTTACCACTCACACGTTCCTAGC 1371
Query 1361 ACAGCTAGAGCTTCTGTAAATAGCCCGACAGCATCTCAAATGGATGAACTTGACGATTTT 1420
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1372 TCAGGAAGAGCTTCTGTAAATAGCCCGACAGCATCTCAAATGGATGAACTCGACGATTTT 1431
Query 1421 TCTATTGGCAGAAATCAGACCGCTGCTAATGGATATCCTGATCCTCCCTCTGGTGAAGAT 1480
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct 1432 TCTATTGGCAGAAATCAGACCGCTGCGAATGGATATCCTGATCCTTCCTCTGGTGAAGAT 1491
Query 1481 TCAGATATTTTTTCTGCTGCCGCTGCATCAGCTGCTGCCATGAAGGATGCCATGGATAAA 1540
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1492 TCAGATGTTTTTTCTACTGCCGCTGCATCAGCTGCTGCCATGAAGGATGCCATGGATAAA 1551
Query 1541 GCAGAAGCAAAGTTTAGGCATGCTAAGGAAAGGAGAGTGAAAGAAAATTTGAAGGCAAGT 1600
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 1552 GCAGAAGCAAAGTTTAGGCATGCTAAGGAAAGGAGAGAGAAAGAAAATTTGAAAGCAAGT 1611
Query 1601 AGAAATAGAGAAGAAGATCAAACAGAGAATTATGATTCTCGTGAAAGGGAACTTAGAGAA 1660
|||| |||||||| |||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1612 AGAAGTAGAGAAGGAGATCACACAGAAAATTATGATTCTCGTGAAAGGGAACTTAGAGAA 1671
Query 1661 AATCAAGTGAGATTGGACCGTGAAagggcagagagggaggcagagatggtaaaagagcag 1720
|| |||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||
Sbjct 1672 AAGCAAGTGAGATTGGACCGTGAGAGGGCAGAGAGGGAGGCAGAGATGGAAAAAGCCCAG 1731
Query 1721 gagagggagagagaggagagagaaagagagcagaagagaattgagagagaaagggaaaga 1780
|||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 1732 GAGAGGGAGAAAGAGGAGAGAGAAAGAGAGCAGAAAAGAATTGAAAGAGAAAGGGAAAGA 1791
Query 1781 CTGTTGGCTAGACAGGCGGTAGAGAGGGCTACAAGAGAAGCACGCGAAAGAGCAGCCACT 1840
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1792 TTGGTGGCTAGACAGGCGGTAGAGAGGGCTACAAGGGAAGCACGCGAAAGAGCAGCCACG 1851
Query 1841 GAAGCTCATGCGAAAGTTCAAAGAGCTGCTGTTGGGAAGGCTACCGATGCCCGAGAACGC 1900
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1852 GAAGCTCATGCGAAAGTTCAAAGAGCTGCTGTTGGAAAGGCTACCGATGCCCGAGAGCGC 1911
Query 1901 GCCGAAAGAGCAGCGGTTCAAAGAGCCCATGCTGAAGCACGTGAAAGGGCAGCTGCAGGG 1960
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1912 GCCGAAAGAGCAGCAGTTCAAAGAGCGCATGCTGAAGCACGTGAAAGGGCAGCTGCAGGG 1971
Query 1961 GCAAGAGAAAAGGCTGCGAAAGCTGCGGCAGAAGCTAGAGAAAGGG-TGA 2009
|||||||| ||||| |||||||||||||||||||||||||||| || |||
Sbjct 1972 GCAAGAGATAAGGCGGCGAAAGCTGCGGCAGAAGCTAGAGAAAAGGCTGA 2021
Score = 1628 bits (881), Expect = 0.0
Identities = 1112/1213 (92%), Gaps = 57/1213 (5%)
Strand=Plus/Plus
Query 1964 AGAGAAAAGGCTGCGAAAGCTGCGGCAGAAGCTAGAGAAAGGGTGAATGCTGAAGCGCGG 2023
||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||
Sbjct 2008 AGAGAAAAGGCTGAGAAAGCTGCAGCAGAAGCTAAAGAAAGGGCGAATGCTGAAGCGCGG 2067
Query 2024 GAGAAGGAAGCAAGGGTTAGGGCAGAACGAGCTGCTGTGGAAAGGGCCGCTGCTGAGGCA 2083
||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 2068 GAGAAGGAAACAAGGGTTAGGGCTGAACGAGCTGCTGTGGAAAGGGCAGCTGCTGAGGCA 2127
Query 2084 CGTGGAAGGGCAGCTGCCCAAGCTAAAGCTAAGCAGCAGCAAGAAAATAACAATGATCTT 2143
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2128 CGTGGAAGGGCAGCTGCCCAAGCTAAAGCTAAGCAGCAGCAAGAAAATACCAATGATCTT 2187
Query 2144 GACTCCTTCTTTAGCTCAATTTCTAGACCAAACAGTGCTCCACGACAGAGAACCAACCCT 2203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2188 GACTCCTTCTTTAGCTCAATTTCTAGACCAAACAGTGCTCCACGACAGAGAACCAACCCT 2247
Query 2204 CTGGATCCTTTCCAGGATTCATGGAACAAAGGAGGATCTTTCGAATCTAGCAGGGAATCT 2263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2248 CTGGATCCTTTCCAGGATTCATGGAACAAAGGAGGATCTTTCGAATCTAGCAGGGAATCT 2307
Query 2264 TCGCGAGTGCCTTCTGGCCCAAC-AGAGAACTTGAGAAAGGCCTCTTCAGTAACAAACAT 2322
| |||||||||| |||||| ||| |||||||||||||||| |||||||||||||||||||
Sbjct 2308 TTGCGAGTGCCTCCTGGCC-AACCAGAGAACTTGAGAAAGACCTCTTCAGTAACAAACAT 2366
Query 2323 TGTTGATGATCTCAGTTCAATATTTGGAG-TTCCAGCTACCCAATCTGGTGGGTTTCAAG 2381
||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||||||
Sbjct 2367 TGTTGATGATCTCAGTTCAATTTTTGGAGCTTC-AGCTTCCCAATCTGGTGGGTTTCAAG 2425
Query 2382 ATGTTGATGGAGAAACTGAAGAGAGACGACGTGCCAGGCTGGAACGCCACCAGAGGACAC 2441
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2426 ATGTTGATGGAGAAACTGAAGAGAGACGACGTGCCAGACTGGAACGCCACCAGAGGACAC 2485
Query 2442 AGGAGCGGGCTGCAAAAGCACTTGCTGAGAAAAATGAACGTGATCTACAAGTACAAAGAG 2501
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2486 AGGAGCGGGCTGCAAAAGCACTTGCTGAGAAAAATGAACGTGATCTTCAAGTACAAAGAG 2545
Query 2502 AACAAGTTGAGAAAGATAGGATTGGGGTGACTTTGGATGTGGAGATAAAACGTTGGGGTG 2561
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 2546 AACAAGTTGAGAAAGATAGGATTGGGGTGACTCTGGATGTTGAGATAAAACGTTGGGGTG 2605
Query 2562 CAGGGAAGGAGGGAAACCTGCGAGCTCTGCTTTCGACATTACAATATGTTCTTTGGCCAG 2621
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2606 CGGGGAAGGAGGGAAACCTGCGAGCTCTGCTTTCGACATTACAATATGTTCTTTGGCCAG 2665
Query 2622 AATGTGGTTGGCAGCCTGTTTCATTGACCGATTTAATTACGGCTGCATCTGTCAAGAAAG 2681
||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 2666 AATGTGGTTGGCAACCTGTTTCATTGACTGATTTAATTACGGCTGCGTCTGTCAAGAAAG 2725
Query 2682 TTTACAGGAAGGCCACTCTCTGTATACACCCTGACAAAGTTCAACAAAAAGGTGCCAATC 2741
||||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||
Sbjct 2726 TTTACAGGAAGGCCACTCTATGTATACACCCTGATAAAGTTCAGCAAAAAGGAGCCAATC 2785
Query 2742 TCCAGCAGAAATACATTGCCGAGAAAGTTTTTGACATGCTCAAGGAAGCATGGAACAAGT 2801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2786 TCCAGCAGAAATACATTGCCGAGAAAGTTTTTGACATGCTCAAGGAAGCATGGAACAAGT 2845
Query 2802 TCAACTCAGAAGAACTCTTCTGAA-AAA--ATG----T-TGTTC-G---TG-G------G 2842
| ||||||||||||||||||||| ||| ||| | |||| | || | |
Sbjct 2846 TTAACTCAGAAGAACTCTTCTGAGGAAATCATGGGGCTATGTTTTGAGATGTGTTTTTCG 2905
Query 2843 T---C-GCCCATAAGATGA-ATCATTTGGCATTCATTAAATAGCCAAA-ATGGTGCCCAA 2896
| | ||||| ||||||| | |||||||||||||||||||||||||| ||| |||||||
Sbjct 2906 TGTGCCGCCCAAAAGATGATA-CATTTGGCATTCATTAAATAGCCAAAGATGATGCCCAA 2964
Query 2897 GTTGGAGGCAGATAGTTGTGGATAGAGTATGTATTCCCAGGATTGATTACCCATCACTGC 2956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2965 GTTGGAGGCAGATAGTTGTGGATAGAGTATGTATTCCCAGGATTGATTACCCATCACTGC 3024
Query 2957 ATCATTATAG--A--CATCGCAGTAATTGGGCATTCATTTTTTGTTAAATTTTCCTTGTC 3012
|||||||||| | |||||||| |||||||||||| |||||||| | || ||||| ||
Sbjct 3025 ATCATTATAGGCAGGCATCGCAGCAATTGGGCATTCTTTTTTTGTCA--TTATCCTTCTC 3082
Query 3013 -A-T-TA-TCCTTCTTGAGT-C--TCGTCCT--T-TAAGAAATG-T-ATT---G-ATGAA 3056
| | | ||||| |||| | | ||| | || | ||| | ||| | || ||
Sbjct 3083 GAGTCTTGTCCTTAAAGAGTACGAT-GTCAAAATGTA-GTGATGGTTATTTTTGTATCAA 3140
Query 3057 AA-CACAATACTTGAGAGCTGTGTATTGTTGTTTCCAAACTATTTATATATATGCATATA 3115
|| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3141 AAACACAATACTTGAGAGCTGTGTATTGTTGTTTCCAAACTATTTATATAT--GCATATA 3198
Query 3116 TGAATATTCTTTT 3128
|||||||||||||
Sbjct 3199 TGAATATTCTTTT 3211
> AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-846616
REVERSE LENGTH=1596
Length=1596
Score = 185 bits (100), Expect = 2e-45
Identities = 108/112 (96%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 2069 GCCGCTGCTGAGGCACGTGGAAGGGCAGCTGCCCAAGCTAAAGCTAAGCAGCAGCAAGAA 2128
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 197 GCCGCTGCTGAGGCACGTGGAAGTGCAGCTGCCCAAGCTAAAGCTAAGCAGCAGCAAGAA 138
Query 2129 AATAACAATGATCTTGACTCCTTCTTTAGCTCAATTTCTAGACCAAACAGTG 2180
||||||||||||||||| ||||||||||||||| |||||||||||| |||||
Sbjct 137 AATAACAATGATCTTGAATCCTTCTTTAGCTCAGTTTCTAGACCAAGCAGTG 86
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 155567690243
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5