BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg497133

Length=164
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  ATCG01060.1 | Symbols: PSAC | iron-sulfur cluster binding;elect...   298    1e-80


> ATCG01060.1 | Symbols: PSAC | iron-sulfur cluster binding;electron 
carriers;4 iron, 4 sulfur cluster binding | chrC:117318-117563 
REVERSE LENGTH=246
Length=246

 Score =  298 bits (161),  Expect = 1e-80
 Identities = 163/164 (99%), Gaps = 0/164 (0%)
 Strand=Plus/Plus

Query  1    ATGATACCTTGGGATGGATGTAAAGCTAAGCAAATAGCTTCTGCTCCAAGAACCGAGGAC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  82   ATGATACCTTGGGATGGATGTAAAGCTAAGCAAATAGCTTCTGCTCCAAGAACCGAGGAC  141

Query  61   TGTGTTGGTTGTAAAAGATGTGAATCCGCCTGTCCAACGGATTTTTTGAGCGTTCGAGTT  120
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  142  TGTGTTGGTTGTAAGAGATGTGAATCCGCCTGTCCAACGGATTTTTTGAGCGTTCGAGTT  201

Query  121  TATTTATGGCATGAAACAACTCGAAGTATGGGTCTAGCTTATTG  164
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  202  TATTTATGGCATGAAACAACTCGAAGTATGGGTCTAGCTTATTG  245



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 7092490491


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5